FFCP PHASE1:Hg19::chr16:30081719..30081734,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-187bp_to_CU680643_5end | |||
|cluster_id=chr16:30081719..30081734,- | |||
|description=CAGE_peak_4_at_CU680643_5end | |||
|id=chr16:30081719..30081734,- | |||
|ontology_enrichment_celltype=CL:0000393!2.29e-13!60;CL:0000211!2.29e-13!60;CL:0000680!5.69e-12!57;CL:0000056!5.69e-12!57;CL:0000355!5.69e-12!57;CL:0000187!9.00e-12!54;CL:0000183!3.66e-10!59;CL:0000192!4.24e-10!42;CL:0000514!4.24e-10!42;CL:0000359!1.85e-09!32;CL:0002371!7.12e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.28e-33;32!CL:0002594;1.13e-21;4!CL:0000192;6.50e-18;43!CL:0002592;1.75e-17;3!CL:0002596;2.90e-11;2!CL:0002595;4.90e-10;5!CL:0002202;5.05e-10;9!CL:0002632;5.05e-10;9!CL:0000393;4.79e-09;61!CL:0000211;4.79e-09;61!CL:0002494;1.88e-08;16!CL:0002328;2.14e-08;3!CL:0000307;2.86e-08;3!CL:0000187;3.09e-08;55!CL:0002368;5.94e-07;13!CL:0002591;8.02e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.23e-34,32;CL:0000192,6.15e-25,43;CL:0000514,6.15e-25,43;CL:0002594,1.49e-21,4;CL:0000187,8.78e-19,55;CL:0000680,1.21e-17,58;CL:0000056,1.21e-17,58;CL:0000355,1.21e-17,58;CL:0002592,1.76e-17,3;CL:0000393,1.29e-16,61;CL:0000211,1.29e-16,61;CL:0002596,2.61e-11,2;CL:0002595,4.07e-10,5;CL:0002202,5.82e-10,9;CL:0002632,5.82e-10,9;CL:0000222,4.70e-09,121;CL:0002494,2.07e-08,16;CL:0002328,2.22e-08,3;CL:0000068,3.43e-08,3;CL:0000069,3.43e-08,3;CL:0000307,3.43e-08,3;CL:0000377,3.43e-08,3;CL:0002368,6.54e-07,13;CL:0002591,7.60e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000514;6.50e-18;43!CL:0000355;9.32e-10;58!CL:0000377;2.86e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.08e-13!83;UBERON:0002329!5.08e-13!83;UBERON:0003077!5.08e-13!83;UBERON:0003059!5.08e-13!83;UBERON:0007282!5.08e-13!83;UBERON:0009618!5.08e-13!83;UBERON:0007285!5.08e-13!83;UBERON:0004290!1.62e-12!70;UBERON:0001134!3.15e-12!61;UBERON:0002036!3.15e-12!61;UBERON:0003082!3.15e-12!61;UBERON:0002385!7.88e-12!63;UBERON:0001015!7.88e-12!63;UBERON:0000383!7.88e-12!63;UBERON:0002204!5.57e-11!167;UBERON:0000486!5.93e-11!82;UBERON:0001637!8.12e-09!42;UBERON:0003509!8.12e-09!42;UBERON:0004572!8.12e-09!42;UBERON:0005256!6.38e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;1.13e-21;4!UBERON:0003498;1.75e-17;3!UBERON:0005985;1.75e-17;3!UBERON:0001621;1.75e-17;3!UBERON:0001637;2.27e-16;42!UBERON:0003509;2.27e-16;42!UBERON:0004572;2.27e-16;42!UBERON:0004573;5.85e-12;33!UBERON:0004571;5.85e-12;33!UBERON:0005396;2.90e-11;2!UBERON:0003834;4.90e-10;5!UBERON:0001533;4.90e-10;5!UBERON:0010260;1.03e-09;9!UBERON:0007500;1.18e-09;56!UBERON:0001981;1.18e-09;56!UBERON:0004537;1.18e-09;56!UBERON:0004815;2.14e-08;3!UBERON:0002031;2.14e-08;3!UBERON:0003914;5.12e-08;74!UBERON:0002049;2.28e-07;75!UBERON:0007798;2.28e-07;75!UBERON:0003513;2.70e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.31e-25,42;UBERON:0003509,1.31e-25,42;UBERON:0004572,1.31e-25,42;UBERON:0001310,1.49e-21,4;UBERON:0001134,3.18e-21,62;UBERON:0002036,3.18e-21,62;UBERON:0003082,3.18e-21,62;UBERON:0002385,1.92e-20,64;UBERON:0001015,1.92e-20,64;UBERON:0000383,1.92e-20,64;UBERON:0007503,1.99e-20,78;UBERON:0003498,4.02e-18,5;UBERON:0005985,4.02e-18,5;UBERON:0002329,4.66e-18,71;UBERON:0003059,4.66e-18,71;UBERON:0007282,4.66e-18,71;UBERON:0004290,4.66e-18,71;UBERON:0009618,4.66e-18,71;UBERON:0003077,9.35e-18,72;UBERON:0007285,9.35e-18,72;UBERON:0001621,1.76e-17,3;UBERON:0007524,1.84e-17,73;UBERON:0007500,2.74e-17,59;UBERON:0001981,2.74e-17,59;UBERON:0004537,2.74e-17,59;UBERON:0006965,2.74e-17,59;UBERON:0000486,7.51e-17,83;UBERON:0004872,5.60e-15,83;UBERON:0004573,1.37e-14,33;UBERON:0004571,1.37e-14,33;UBERON:0000055,1.43e-14,68;UBERON:0003914,8.32e-14,117;UBERON:0002049,2.71e-12,78;UBERON:0007798,2.71e-12,78;UBERON:0005256,1.47e-11,122;UBERON:0002100,2.25e-11,199;UBERON:0005396,2.61e-11,2;UBERON:0004535,1.58e-10,109;UBERON:0001009,3.78e-10,112;UBERON:0003834,4.07e-10,5;UBERON:0001533,4.07e-10,5;UBERON:0003104,5.04e-10,160;UBERON:0009142,5.04e-10,160;UBERON:0010260,1.16e-09,9;UBERON:0000490,6.31e-09,148;UBERON:0000025,1.33e-08,192;UBERON:0004815,2.22e-08,3;UBERON:0002031,2.22e-08,3;UBERON:0000948,1.06e-07,24;UBERON:0005498,1.06e-07,24;UBERON:0004140,1.06e-07,24;UBERON:0009881,1.06e-07,24;UBERON:0004141,1.06e-07,24;UBERON:0003084,1.06e-07,24;UBERON:0007005,1.06e-07,24;UBERON:0004139,1.06e-07,24;UBERON:0004291,1.06e-07,24;UBERON:0003103,1.91e-07,68;UBERON:0003513,2.37e-07,7;UBERON:0002204,2.56e-07,167;UBERON:0003081,6.05e-07,203;UBERON:0007100,8.91e-07,27;UBERON:0004111,9.88e-07,240 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,2.00146596706261,0.446961094427288,0.872338524100369,2.53299878168311,0,0,0,1.39560233594486,0,0.263766978228454,0.123766352960047,1.65698687863958,0,0,0,0.487932798790507,0.123121058076788,0.612002073732759,0,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0.786728553697808,0,0,3.67768489791571,2.10844143144775,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0,0.217010870715852,0.223915474239924,0.647787332037959,0,0,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0.512321413058201,0,0,0,1.35426486594342,0.188242339542605,0,0.224723484445085,0.612167784741805,0,0,0.329851300186716,0,0.426224750532694,0,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0.368277635987565,0.316462387440884,0.422510572623884,0.212604299965044,0.628975936525128,0.112328631146495,0,0.16072558669708,0.285012743741249,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0.493313713811028,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0.895037932904712,0.361439152384566,1.50401373190767,0,0,0.486634870302636,0.0945348171640679,0.665188192387692,0.175669571386252,0.0654895377488563,0,0,0,0.174129737299267,0.398873881556595,0.238490624305342,0,0,0.79504962946682,0,0,0,0,0.275118041940067,0.417989933073621,0.516833518338658,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0.25326102332916,0.264818361626438,0,0,1.12135520028461,4.2699598291882,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.117434498643765,0.161872944368132,0.280901613404497,0,0.245668634623536,0,0,0.247266929278557,0,0,0.336672227908132,0,0,0,0.612975591598039,0.150238058906597,0.680593098960126,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0.302256294682921,0,1.15956511897978,0,0,0,0,0.232387885739037,0.10366105501537,0,1.82488679537915,0,0,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0.241011029883482,1.10293972732394,0.217879444092406,0,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0.288732895522148,0.462985512576611,0,0.790204397959275,0,0.492434012174795,0.234004265139238,0.297262324577456,0,0.16798212819886,0.141775097242386,0.358234090811393,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0.532844358032199,0.285955987316295,0,0,0.325736184293735,0.710783897485092,0,0.301439377059586,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0,0,0.215627574859517,0,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0.813795071099207,0.623912584592421,0.356857977594324,0.630809660135739,0,0.601892199455438,0,0,0,0.368738337083406,0.173767228936166,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0.511707249066704,0.321707842287215,0,0,0,0,0,0.232420756919918,0.120859449591622,0,0,0.34444334449382,0,0,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,1.13733384070897,0.170093705276516,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.770243085573222,0.460511024178389,0.827019434907183,0,0.145016693914229,0.170453254832202,0.0890320356467374,0.165284915360978,0,0.127612712494584,0,0,0,4.1822236209636,0,2.66153015158511,0.869932992075073,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0,0,1.27281299170375,1.56989728039846,0,0.274537029736055,0.235624804691373,3.23491970517306,3.17020642346017,2.52755073743389,0.48763373908959,0.487426979262569,2.11300293513511,0.136499911407986,0.141405431953713,2.26016233240486,0.551365343546124,1.99031692572366,1.31535265576129,0.578775534266688,0,1.42037263873893,2.478587984798,3.3803472303869,0,0.294747123039363,1.07001315444375,0.354761064070598,0.211107635297664,0,0,0,0.288666338176536,2.01090682660736,2.17781969722645,0,0,0,0.886860307073351,0.229723400206959,0.507447609232169,0.764637207142375,0.569647187174163,0,0,0,0.540031437238115,0,0,0,0,0.185803175125719,0,0,0.159426272728822,0,0,0,0,0,0.456469358066384,0.156679895773023,0,0.338583555603207,0.1605880751037,0.201799707191048,0,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0.445773537109913,0,0.95497793895076,0,0.307160702099232,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0,0.21787692703798,0,0,0,0,0.0897576444097721,0,2.23300811812344,0.0915975934018623,0,0,0.156980256395025,0,0,0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| |||
|short_description=p4@CU680643 | |||
}} |
Latest revision as of 08:04, 25 July 2015
Short description: | p4@CU680643 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CU680643_5end |
Coexpression cluster: | NA |
Association with transcript: | -187bp_to_CU680643_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.23e-34 | 32 |
smooth muscle cell | 6.15e-25 | 43 |
smooth muscle myoblast | 6.15e-25 | 43 |
smooth muscle cell of the umbilical artery | 1.49e-21 | 4 |
muscle cell | 8.78e-19 | 55 |
muscle precursor cell | 1.21e-17 | 58 |
myoblast | 1.21e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.21e-17 | 58 |
smooth muscle cell of the coronary artery | 1.76e-17 | 3 |
electrically responsive cell | 1.29e-16 | 61 |
electrically active cell | 1.29e-16 | 61 |
smooth muscle cell of the carotid artery | 2.61e-11 | 2 |
smooth muscle cell of the subclavian artery | 4.07e-10 | 5 |
epithelial cell of tracheobronchial tree | 5.82e-10 | 9 |
epithelial cell of lower respiratory tract | 5.82e-10 | 9 |
mesodermal cell | 4.70e-09 | 121 |
cardiocyte | 2.07e-08 | 16 |
bronchial epithelial cell | 2.22e-08 | 3 |
duct epithelial cell | 3.43e-08 | 3 |
branched duct epithelial cell | 3.43e-08 | 3 |
tracheal epithelial cell | 3.43e-08 | 3 |
tracheoblast | 3.43e-08 | 3 |
respiratory epithelial cell | 6.54e-07 | 13 |
smooth muscle cell of the pulmonary artery | 7.60e-07 | 1 |