FFCP PHASE1:Hg19::chr16:81772633..81772676,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_uc002fgs.2_5end | |association_with_transcript=-2bp_to_uc002fgs.2_5end | ||
|cluster_id=chr16:81772633..81772676,+ | |||
|coexpression_cluster_id=C498 | |coexpression_cluster_id=C498 | ||
|description=CAGE_peak_1_at_uc002fgs.2_5end | |description=CAGE_peak_1_at_uc002fgs.2_5end | ||
|id=chr16:81772633..81772676,+ | |id=chr16:81772633..81772676,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.93e-60!172;CL:0000566!1.93e-60!172;CL:0002032!2.74e-56!165;CL:0000837!2.74e-56!165;CL:0000988!7.95e-55!182;CL:0000763!8.61e-49!112;CL:0000049!8.61e-49!112;CL:0000738!2.99e-44!140;CL:0002031!1.52e-35!124;CL:0000766!4.19e-35!76;CL:0002087!2.62e-32!119;CL:0000557!6.91e-30!71;CL:0000839!1.32e-28!70;CL:0002009!4.85e-25!65;CL:0002057!4.72e-24!42;CL:0002194!1.16e-23!63;CL:0000576!1.16e-23!63;CL:0000040!1.16e-23!63;CL:0000559!1.16e-23!63;CL:0000860!1.46e-21!45;CL:0000945!2.29e-21!24;CL:0000826!2.29e-21!24;CL:0000236!1.96e-16!14;CL:0000134!7.26e-10!358;CL:0000094!1.72e-09!8;CL:0002393!2.58e-09!9;CL:0002397!2.58e-09!9;CL:0002320!4.13e-09!365;CL:0000542!4.18e-08!53;CL:0000051!4.18e-08!53;CL:0000838!1.69e-07!52;CL:0000219!6.47e-07!390 | |ontology_enrichment_celltype=CL:0000037!1.93e-60!172;CL:0000566!1.93e-60!172;CL:0002032!2.74e-56!165;CL:0000837!2.74e-56!165;CL:0000988!7.95e-55!182;CL:0000763!8.61e-49!112;CL:0000049!8.61e-49!112;CL:0000738!2.99e-44!140;CL:0002031!1.52e-35!124;CL:0000766!4.19e-35!76;CL:0002087!2.62e-32!119;CL:0000557!6.91e-30!71;CL:0000839!1.32e-28!70;CL:0002009!4.85e-25!65;CL:0002057!4.72e-24!42;CL:0002194!1.16e-23!63;CL:0000576!1.16e-23!63;CL:0000040!1.16e-23!63;CL:0000559!1.16e-23!63;CL:0000860!1.46e-21!45;CL:0000945!2.29e-21!24;CL:0000826!2.29e-21!24;CL:0000236!1.96e-16!14;CL:0000134!7.26e-10!358;CL:0000094!1.72e-09!8;CL:0002393!2.58e-09!9;CL:0002397!2.58e-09!9;CL:0002320!4.13e-09!365;CL:0000542!4.18e-08!53;CL:0000051!4.18e-08!53;CL:0000838!1.69e-07!52;CL:0000219!6.47e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000945;6.15e-33;24!CL:0000236;4.83e-22;13!CL:0000094;1.76e-12;8!CL:0000763;6.71e-11;100!CL:0002393;7.10e-10;6!CL:0002397;7.10e-10;6!CL:0000542;1.31e-09;53!CL:0000081;1.10e-08;11!CL:0000988;2.30e-08;177!CL:0000766;4.15e-08;69!CL:0002087;9.30e-08;104!CL:0000775;1.16e-07;3!CL:0000738;1.34e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.84e-48,168;CL:0002032,3.17e-45,161;CL:0000837,3.17e-45,161;CL:0000988,6.69e-45,177;CL:0000738,8.07e-35,136;CL:0000945,5.30e-33,24;CL:0000826,5.30e-33,24;CL:0000763,2.18e-29,108;CL:0000049,2.18e-29,108;CL:0000236,1.42e-23,14;CL:0002031,2.83e-23,120;CL:0002087,3.82e-22,115;CL:0000766,1.10e-17,72;CL:0002393,1.25e-14,9;CL:0002397,1.25e-14,9;CL:0000542,5.76e-14,53;CL:0000051,5.76e-14,53;CL:0000838,6.77e-13,52;CL:0000094,2.27e-12,8;CL:0000557,3.34e-12,67;CL:0000134,3.98e-12,354;CL:0002320,1.61e-11,361;CL:0000839,2.05e-10,66;CL:0000219,6.97e-10,386;CL:0000081,1.31e-08,11;CL:0000860,1.52e-08,42;CL:0002057,1.52e-08,42;CL:0002009,2.22e-08,61;CL:0002194,6.66e-08,59;CL:0000576,6.66e-08,59;CL:0000040,6.66e-08,59;CL:0000559,6.66e-08,59;CL:0000775,1.17e-07,3;CL:0000034,5.68e-07,441;CL:0000473,5.84e-07,48;CL:0000234,5.84e-07,48;CL:0000048,6.47e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000051;1.31e-09;53!CL:0000049;2.92e-08;108 | |||
|ontology_enrichment_disease=DOID:8692!1.99e-14!31;DOID:1240!3.89e-12!39;DOID:2531!1.50e-11!51;DOID:0060083!1.50e-11!51 | |ontology_enrichment_disease=DOID:8692!1.99e-14!31;DOID:1240!3.89e-12!39;DOID:2531!1.50e-11!51;DOID:0060083!1.50e-11!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.35e-15;31!DOID:1240;2.23e-11;39!DOID:2531;2.29e-09;51!DOID:0060083;2.29e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.66e-16,31;DOID:2531,8.26e-15,51;DOID:0060083,8.26e-15,51;DOID:1240,1.13e-13,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.04e-35!102;UBERON:0003061!3.04e-35!102;UBERON:0002193!2.47e-32!112;UBERON:0002371!2.28e-25!80;UBERON:0007023!5.26e-24!115;UBERON:0001474!2.83e-22!86;UBERON:0002405!1.00e-18!115;UBERON:0004765!4.15e-17!101;UBERON:0001434!4.15e-17!101;UBERON:0000178!8.88e-10!15;UBERON:0000179!8.88e-10!15;UBERON:0000463!8.88e-10!15;UBERON:0002384!8.68e-09!375;UBERON:0003081!1.19e-07!216;UBERON:0001049!4.27e-07!57;UBERON:0005068!4.27e-07!57;UBERON:0006241!4.27e-07!57;UBERON:0007135!4.27e-07!57;UBERON:0001893!4.57e-07!34;UBERON:0002020!7.43e-07!34;UBERON:0003528!7.43e-07!34 | |ontology_enrichment_uberon=UBERON:0002390!3.04e-35!102;UBERON:0003061!3.04e-35!102;UBERON:0002193!2.47e-32!112;UBERON:0002371!2.28e-25!80;UBERON:0007023!5.26e-24!115;UBERON:0001474!2.83e-22!86;UBERON:0002405!1.00e-18!115;UBERON:0004765!4.15e-17!101;UBERON:0001434!4.15e-17!101;UBERON:0000178!8.88e-10!15;UBERON:0000179!8.88e-10!15;UBERON:0000463!8.88e-10!15;UBERON:0002384!8.68e-09!375;UBERON:0003081!1.19e-07!216;UBERON:0001049!4.27e-07!57;UBERON:0005068!4.27e-07!57;UBERON:0006241!4.27e-07!57;UBERON:0007135!4.27e-07!57;UBERON:0001893!4.57e-07!34;UBERON:0002020!7.43e-07!34;UBERON:0003528!7.43e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.68e-14;15!UBERON:0000179;3.68e-14;15!UBERON:0000463;3.68e-14;15!UBERON:0002390;1.53e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.48e-20,98;UBERON:0003061,2.48e-20,98;UBERON:0002193,1.38e-18,108;UBERON:0000178,3.34e-14,15;UBERON:0000179,3.34e-14,15;UBERON:0000463,3.34e-14,15;UBERON:0002384,3.29e-11,371;UBERON:0002405,3.57e-10,93;UBERON:0002371,6.07e-10,76;UBERON:0001474,9.92e-09,82;UBERON:0004765,2.20e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45185470921107,1.39571002064908,1.41679406364623,1.18009283054671,0.383829398097213,6.03782880932696,0,0,0,17.8949233340497,11.0892001340189,0.293600439334847,2.76997704265939,1.80490002723128,1.73608696572681,0.223915474239924,0,0.257575567634187,0.726991193897824,0.755751887377619,0.970336244751265,0.232429036905685,0.822335776043652,0.309706370895104,0.575384784644301,0.512321413058201,1.18241114944293,0.344745680736619,1.29096936716765,2.70852973188684,0.941211697713023,0.272906150057846,0.449446968890169,0,0.320929027076094,1.27867425159808,0.329851300186716,1.19678194572979,0.426224750532694,0,0,0.622822248995575,0.251248665256743,0.521482918420201,0.65156653411535,0.605399502633369,1.10483290796269,0.632924774881769,5.49263744411049,1.27562579979026,1.25795187305026,2.92054440980887,1.65194582125657,1.12507910687956,4.27519115611873,2.38700012638908,4.01861138282195,17.5996244461323,12.561188059029,16.9006758234075,15.7890182349608,22.0217792869807,14.9435634388166,20.4923910563307,12.4026988089597,11.9534723512984,12.3319809767897,11.0859236156316,1.32171328579026,0.560508562981536,3.423993102076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.97364218096405,0.696518949197069,0.664789802594326,2.8618874916641,1.14398982156026,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4026709641308,19.3890132074163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0.492663237895943,5.81119664487292,4.97587477297853,8.93543711185161,4.79721247020244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,25.4662388142042,35.899375104483,35.225318642063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27444828735176,0.647142602455851,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,11.6712950123399,11.4695581071356,8.54470780761244,10.2439663446849,8.22724546172388,11.6725196014689,15.6609116799053,11.8968776444141,0,0,0,9.47596193141165,0.865615277858669,0,0,2.79411120005943,3.06408592211787,8.6786168916792,4.54470716384378,2.80797178113459,5.02116293873023,0.94007937463814,2.50634477090067,2.37008488922245,0.481764225311099,0.80719882876419,5.96184732766457,3.77855879231341,1.53620382154229,1.78940886313933,1.00109485027145,13.8725547735449,0,1.23087398947712,12.9818725668472,0,1.4098700508785,0,0.146508179271894,0,0,0,0,0,0,0,1.82870241333667,0,0,0,0.19924798825107,7.18338180380984,0.251932747854276,0,4.06179858021529,0,0,0,0,0.197286811273867,4.7896618469388,0,0.969332746095218,0.371072392647405,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.627921025580099,6.31604391220594,0,0,0,0,1.58936578980379,0,0,0,0,0,0,0,0,0,0,3.03305098413047,0,1.1713222286267,8.21046551470497,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581934098930517,0,0,0,0,0.50648636764703,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,2.0535806833799,1.27746588066972,0,0,0.558564802544508,0,0,0,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0,0,1.63444087333891,0,0,0,1.799791132412,0.77380195455795,0.91124334987037,0,0.0788057072991982,0.157363764404994,0,0,0,0,0.662091970365432,0,0,0,0,0,0.164185041498678,0,0,0.146552233678082,1.32506888912221,0.129282956361551,1.3223260174269,0,0,0.213574825135389,0.314408610199332,0.828478110694391,0.992332043623902,0,20.7047417247523,0,0,0,0,0,0,0,0.122026264901963,0.876336514945499,0,1.55300672151593,1.42821726765182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,1.38699248602383,0,0,0,0,0,0,0,0,0,0,0,0,1.11728983594649,0,0,0,0,0,0.963438376446893,0,0.957803154342908,0.41023272848151,0.252071696221718,0.553258019713743,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.675375846183947,0,1.2401207790071,0.887821342714695,0.546974809018219,0,0,0,0,0,0,0,0,0,3.68748760178494,0,1.83518279037446,0.394636641377094,0,0,0.078493092850514,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.385870790539723,0.218559560503957,0,0,0,0,3.26751040359795,0,0,2.91350145737546,7.09036767709349,0,0,0,0,0,0,1.29005624836306,0,0.679914901909147,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0.303114792872958,0,0,1.44806194206653,1.0661699095049,0,0.710478008196067,1.36564371450887,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| ||
|short_description=p1@uc002fgs.2 | |short_description=p1@uc002fgs.2 | ||
}} | }} |
Latest revision as of 12:44, 25 July 2015
Short description: | p1@uc002fgs.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc002fgs.2_5end |
Coexpression cluster: | C498_Eosinophils_Neutrophils_CD19_Burkitt_diffuse_lymphoma_CD14 |
Association with transcript: | -2bp_to_uc002fgs.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.48e-20 | 98 |
blood island | 2.48e-20 | 98 |
hemolymphoid system | 1.38e-18 | 108 |
blood | 3.34e-14 | 15 |
haemolymphatic fluid | 3.34e-14 | 15 |
organism substance | 3.34e-14 | 15 |
connective tissue | 3.29e-11 | 371 |
immune system | 3.57e-10 | 93 |
bone marrow | 6.07e-10 | 76 |
bone element | 9.92e-09 | 82 |
skeletal element | 2.20e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.66e-16 | 31 |
hematologic cancer | 8.26e-15 | 51 |
immune system cancer | 8.26e-15 | 51 |
leukemia | 1.13e-13 | 39 |