FFCP PHASE1:Hg19::chr17:59479775..59479790,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:59479775..59479790,+ | |||
|coexpression_cluster_id=C131 | |coexpression_cluster_id=C131 | ||
|description=CAGE_peak_at_chr17:59479775..59479790,+ | |description=CAGE_peak_at_chr17:59479775..59479790,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002195!6.56e-07!2;CL:0002571!6.56e-07!2 | |ontology_enrichment_celltype=CL:0002195!6.56e-07!2;CL:0002571!6.56e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002598;2.02e-11;2 | |ontology_enrichment_celltype_v019=CL:0002598;2.02e-11;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002598,2.02e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;4.66e-21;1!UBERON:0007297;3.18e-11;2!UBERON:0008947;8.26e-07;29 | |ontology_enrichment_development_v019=UBERON:0005754;4.66e-21;1!UBERON:0007297;3.18e-11;2!UBERON:0008947;8.26e-07;29 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.39e-30!115;UBERON:0006947!6.32e-10!3;UBERON:0004054!6.32e-10!3;UBERON:0005904!1.60e-07!4;UBERON:0003075!1.65e-07!86;UBERON:0007284!1.65e-07!86;UBERON:0002346!5.53e-07!90;UBERON:0000062!6.28e-07!511;UBERON:0000481!7.33e-07!347 | |ontology_enrichment_uberon=UBERON:0007023!3.39e-30!115;UBERON:0006947!6.32e-10!3;UBERON:0004054!6.32e-10!3;UBERON:0005904!1.60e-07!4;UBERON:0003075!1.65e-07!86;UBERON:0007284!1.65e-07!86;UBERON:0002346!5.53e-07!90;UBERON:0000062!6.28e-07!511;UBERON:0000481!7.33e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0000998;4.66e-21;1!UBERON:0002171;4.66e-21;1!UBERON:0006868;4.66e-21;1!UBERON:0006518;4.66e-21;1!UBERON:0008949;4.66e-21;1!UBERON:0000101;4.66e-21;1!UBERON:0002167;4.66e-21;1!UBERON:0002048;8.47e-09;22!UBERON:0000117;8.47e-09;22!UBERON:0000171;8.47e-09;22!UBERON:0000170;8.47e-09;22!UBERON:0005178;1.65e-08;34!UBERON:0002224;1.65e-08;34!UBERON:0006947;6.56e-08;3!UBERON:0004054;6.56e-08;3!UBERON:0005181;9.37e-08;35!UBERON:0000065;7.13e-07;44 | |ontology_enrichment_uberon_v019=UBERON:0000998;4.66e-21;1!UBERON:0002171;4.66e-21;1!UBERON:0006868;4.66e-21;1!UBERON:0006518;4.66e-21;1!UBERON:0008949;4.66e-21;1!UBERON:0000101;4.66e-21;1!UBERON:0002167;4.66e-21;1!UBERON:0002048;8.47e-09;22!UBERON:0000117;8.47e-09;22!UBERON:0000171;8.47e-09;22!UBERON:0000170;8.47e-09;22!UBERON:0005178;1.65e-08;34!UBERON:0002224;1.65e-08;34!UBERON:0006947;6.56e-08;3!UBERON:0004054;6.56e-08;3!UBERON:0005181;9.37e-08;35!UBERON:0000065;7.13e-07;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,2.82e-21,1;UBERON:0006868,2.82e-21,1;UBERON:0002171,3.45e-21,1;UBERON:0006518,3.45e-21,1;UBERON:0008949,3.45e-21,1;UBERON:0000101,3.45e-21,1;UBERON:0002167,3.45e-21,1;UBERON:0005178,7.99e-10,34;UBERON:0002224,7.99e-10,34;UBERON:0005181,1.49e-09,35;UBERON:0002048,7.41e-09,22;UBERON:0000117,7.41e-09,22;UBERON:0000171,7.41e-09,22;UBERON:0000170,7.41e-09,22;UBERON:0005597,7.41e-09,22;UBERON:0000118,7.41e-09,22;UBERON:0006947,5.54e-08,3;UBERON:0004054,5.54e-08,3;UBERON:0001004,7.52e-07,74 | |||
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| ||
|short_description=p@chr17:59479775..59479790,+ | |short_description=p@chr17:59479775..59479790,+ | ||
}} | }} |
Latest revision as of 19:36, 25 July 2015
Short description: | p@chr17:59479775..59479790, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:59479775..59479790, + |
Coexpression cluster: | C131_lung_trachea_Alveolar_thyroid_umbilical_throat_skin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial smooth muscle cell | 2.02e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 2.82e-21 | 1 |
seminal fluid secreting gland | 2.82e-21 | 1 |
lower lobe of right lung | 3.45e-21 | 1 |
right lung lobe | 3.45e-21 | 1 |
lower lobe of lung | 3.45e-21 | 1 |
lobe of lung | 3.45e-21 | 1 |
right lung | 3.45e-21 | 1 |
thoracic cavity element | 7.99e-10 | 34 |
thoracic cavity | 7.99e-10 | 34 |
thoracic segment organ | 1.49e-09 | 35 |
lung | 7.41e-09 | 22 |
respiratory tube | 7.41e-09 | 22 |
respiration organ | 7.41e-09 | 22 |
pair of lungs | 7.41e-09 | 22 |
lung primordium | 7.41e-09 | 22 |
lung bud | 7.41e-09 | 22 |
male genital duct | 5.54e-08 | 3 |
internal male genitalia | 5.54e-08 | 3 |
respiratory system | 7.52e-07 | 74 |