FFCP PHASE1:Hg19::chr17:70120154..70120174,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:70120154..70120174,+
|short_description=p@chr17:70120154..70120174,+
|description=CAGE_peak_at_chr17:70120154..70120174,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:70120154..70120174,+ | |||
|description=CAGE_peak_at_chr17:70120154..70120174,+ | |||
|id=chr17:70120154..70120174,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.36e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.81e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.81e-07;1!UBERON:0008801;7.34e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;4.61e-12;2!DOID:3371;2.81e-07;1!DOID:4549;2.81e-07;1!DOID:5861;2.81e-07;1!DOID:6496;2.81e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.07e-11,2;DOID:3371,2.82e-07,1;DOID:4549,2.82e-07,1;DOID:5861,2.82e-07,1;DOID:6496,2.82e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.71e-24!82;UBERON:0005743!3.40e-24!86;UBERON:0001049!8.68e-24!57;UBERON:0005068!8.68e-24!57;UBERON:0006241!8.68e-24!57;UBERON:0007135!8.68e-24!57;UBERON:0000073!3.74e-23!94;UBERON:0001016!3.74e-23!94;UBERON:0000955!1.09e-21!69;UBERON:0006238!1.09e-21!69;UBERON:0003075!5.76e-20!86;UBERON:0007284!5.76e-20!86;UBERON:0002780!6.39e-20!41;UBERON:0001890!6.39e-20!41;UBERON:0006240!6.39e-20!41;UBERON:0002616!1.28e-19!59;UBERON:0003080!3.78e-19!42;UBERON:0002020!2.55e-18!34;UBERON:0003528!2.55e-18!34;UBERON:0002346!3.22e-18!90;UBERON:0001893!4.86e-18!34;UBERON:0002791!1.34e-17!33;UBERON:0004121!5.58e-17!169;UBERON:0001869!8.41e-17!32;UBERON:0000033!3.22e-16!123;UBERON:0003056!5.27e-16!61;UBERON:0000924!5.51e-16!173;UBERON:0006601!5.51e-16!173;UBERON:0000153!4.00e-15!129;UBERON:0007811!4.00e-15!129;UBERON:0002619!3.87e-14!22;UBERON:0000956!8.17e-14!25;UBERON:0000203!8.17e-14!25;UBERON:0007023!2.86e-13!115;UBERON:0001950!2.99e-12!20;UBERON:0000475!1.12e-09!365;UBERON:0004111!6.34e-08!241;UBERON:0000481!1.11e-07!347;UBERON:0000119!1.74e-07!312;UBERON:0000025!2.51e-07!194;UBERON:0000483!2.79e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.50e-14;22!UBERON:0000956;1.54e-12;25!UBERON:0000203;1.54e-12;25!UBERON:0001954;1.81e-12;2!UBERON:0003022;1.81e-12;2!UBERON:0002421;1.81e-12;2!UBERON:0002600;1.81e-12;2!UBERON:0002791;5.73e-12;32!UBERON:0001869;6.24e-12;32!UBERON:0001893;3.81e-11;34!UBERON:0000349;8.81e-11;5!UBERON:0003528;2.22e-10;34!UBERON:0002020;2.22e-10;34!UBERON:0001950;5.87e-09;20!UBERON:0002780;6.30e-08;41!UBERON:0001890;6.30e-08;41!UBERON:0000998;2.81e-07;1!UBERON:0006868;2.81e-07;1!UBERON:0001831;7.34e-07;1!UBERON:0001567;7.34e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.40e-14,22;UBERON:0000956,1.49e-12,25;UBERON:0000203,1.49e-12,25;UBERON:0001954,2.35e-12,2;UBERON:0003022,2.35e-12,2;UBERON:0002421,2.35e-12,2;UBERON:0002600,2.35e-12,2;UBERON:0002791,2.76e-12,32;UBERON:0001869,2.76e-12,32;UBERON:0003528,1.70e-11,34;UBERON:0002020,1.70e-11,34;UBERON:0001893,1.70e-11,34;UBERON:0000349,1.36e-10,5;UBERON:0001017,2.57e-10,81;UBERON:0001049,9.17e-10,56;UBERON:0005068,9.17e-10,56;UBERON:0006241,9.17e-10,56;UBERON:0007135,9.17e-10,56;UBERON:0002780,2.48e-09,41;UBERON:0001890,2.48e-09,41;UBERON:0003080,2.48e-09,41;UBERON:0006240,2.48e-09,41;UBERON:0001016,4.94e-09,89;UBERON:0001950,5.31e-09,20;UBERON:0000073,1.40e-08,53;UBERON:0002616,1.40e-08,53;UBERON:0000998,2.50e-07,1;UBERON:0006868,2.50e-07,1;UBERON:0011216,3.71e-07,223;UBERON:0001831,3.78e-07,1;UBERON:0001567,3.78e-07,1;UBERON:0008801,3.78e-07,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.522371256399677,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0.730310090387373,0,0.123121058076788,0.204000691244253,1.25381888591235,0,0.136874425072884,0.125542639594803,0.458480434487708,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.12786256184353,0,0,0.144846518960824,1.5905718941022,0.973269740605272,0,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.933633106199299,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0.206105058476878,0,0,0,0,0,0.184099797284599,0,0,0.10075209822764,0,0,0,0.573609190778008,0,0.132529768321485,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.171567810298526,0.768251997860379,0,0.402115889646523,0,0,0,0,0.34779121492523,0.117408694235822,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0.16798212819886,0.283550194484773,0.179117045405697,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,5.08189248444927,1.30139853857622,0,0.167516265334349,1.27587750330633,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0.160853921143607,0,0.308419387605311,0,0.246381468041427,1.03850885836724,0.116210378459959,0.241718899183244,1.40354529212299,0.184161977871793,0,0,0.131124414959424,0.451199612907412,0.308061348417659,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0.895499018888713,0,0,0.256450125116389,0,0,0.103041011647722,0,0.165018999841176,0,1.95018073810956,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,3.36942951335251,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0.568272293612826,0,0,0,0,1.1253553312841,0,0,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0.254253650292766,0.236387681767936,0.344743373241465,0,0.173624994933292,2.65722415744152,0.844175070377856,0,0.663475559587348,0,0.438770794307945,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0.889563386041866,0.247127877893006,0.522109747527277,0.471807930864739,0,0.468528891450678,0,0,0.971121518136371,0,0,0.30607276163049,0,0,0,0,0.330991955875499,0.313932918407225,1.19472429772959,0.569219092059585,0.970722711091971,0,0.0979923974143777,0,0,0,0,0,0,0.193978032976839,2.64768380074501,0.677942222341597,0,0,0.379864775735272,0.391102765469606,0.320635281006135,0,0.599428828746391,0.576361668616424,0,0,0,0.372757606696298,0.471388069233591,0.135904206073614,0,0.407992870545287,0.288950589901519,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0,0.268733889946905,0,0,0.787831823072237,1.483485450861,1.01105315781277,0,0,2.38568906942791,1.22583065500418,0,0.137539436597234,0,0,0,0.425246896606173,0,0.157611414598396,0.0524545881349981,0.105600336519406,1.07572403599707,0.383830394638891,0,0,0.5085370753095,0.542999601753713,0,0.326587360109409,0,0,0.340776043570843,0,0,0,0.517131825446202,0.52893040697076,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,1.58634144372552,1.1267183763585,0,0.887432412294818,0.931446044120752,0.138348634936231,0.249960815924213,0.758245587708239,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0,0.429642228169954,0,0,0,0.686791410365586,0,0,0.385239660814607,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0.553033744606923,0,0,0,0.655219697692825,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0,0,0.256916900385838,1.41696576325585,0.957803154342908,0.615349092722265,0.252071696221718,0.414943514785307,0.968853873791107,0,0,0.825788063434183,0,0.115525666150338,0,0,0,0,0,0.781514011233092,0,0.327543835020193,0.295712172434091,0.202612753855184,0.781078098613847,1.2401207790071,0.317079050969534,1.64092442705466,1.64477330057155,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0.115233987555779,0.171488009437418,0.271878931907327,0.263091094251396,0,1.00108261702862,0.156986185701028,0.785577949580009,0,0,0,0.9555033757741,0.214429632529969,0,0.697448552208751,0.1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| ||
|short_description=p@chr17:70120154..70120174,+ | |||
}} | }} |
Latest revision as of 20:31, 25 July 2015
Short description: | p@chr17:70120154..70120174, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:70120154..70120174, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.81e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.40e-14 | 22 |
cerebral cortex | 1.49e-12 | 25 |
pallium | 1.49e-12 | 25 |
Ammon's horn | 2.35e-12 | 2 |
lobe parts of cerebral cortex | 2.35e-12 | 2 |
hippocampal formation | 2.35e-12 | 2 |
limbic lobe | 2.35e-12 | 2 |
regional part of telencephalon | 2.76e-12 | 32 |
cerebral hemisphere | 2.76e-12 | 32 |
brain grey matter | 1.70e-11 | 34 |
gray matter | 1.70e-11 | 34 |
telencephalon | 1.70e-11 | 34 |
limbic system | 1.36e-10 | 5 |
central nervous system | 2.57e-10 | 81 |
neural tube | 9.17e-10 | 56 |
neural rod | 9.17e-10 | 56 |
future spinal cord | 9.17e-10 | 56 |
neural keel | 9.17e-10 | 56 |
regional part of forebrain | 2.48e-09 | 41 |
forebrain | 2.48e-09 | 41 |
anterior neural tube | 2.48e-09 | 41 |
future forebrain | 2.48e-09 | 41 |
nervous system | 4.94e-09 | 89 |
neocortex | 5.31e-09 | 20 |
regional part of nervous system | 1.40e-08 | 53 |
regional part of brain | 1.40e-08 | 53 |
seminal vesicle | 2.50e-07 | 1 |
seminal fluid secreting gland | 2.50e-07 | 1 |
organ system subdivision | 3.71e-07 | 223 |
parotid gland | 3.78e-07 | 1 |
cheek | 3.78e-07 | 1 |
parotid gland primordium | 3.78e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.07e-11 | 2 |
chondrosarcoma | 2.82e-07 | 1 |
extraosseous chondrosarcoma | 2.82e-07 | 1 |
myxoid chondrosarcoma | 2.82e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 2.82e-07 | 1 |