FFCP PHASE1:Hg19::chr18:2734660..2734665,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:2734660..2734665,+ | |||
|coexpression_cluster_id=C306 | |||
|description=CAGE_peak_at_chr18:2734660..2734665,+ | |description=CAGE_peak_at_chr18:2734660..2734665,+ | ||
|id=chr18:2734660..2734665,+ | |id=chr18:2734660..2734665,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.36e-13!140;CL:0002087!1.58e-12!119;CL:0000037!1.88e-12!172;CL:0000566!1.88e-12!172;CL:0000988!7.14e-11!182;CL:0002032!7.16e-11!165;CL:0000837!7.16e-11!165;CL:0002031!6.57e-10!124;CL:0000860!1.17e-08!45;CL:0000542!1.21e-08!53;CL:0000051!1.21e-08!53;CL:0000838!3.12e-08!52;CL:0002057!6.21e-08!42 | |ontology_enrichment_celltype=CL:0000738!1.36e-13!140;CL:0002087!1.58e-12!119;CL:0000037!1.88e-12!172;CL:0000566!1.88e-12!172;CL:0000988!7.14e-11!182;CL:0002032!7.16e-11!165;CL:0000837!7.16e-11!165;CL:0002031!6.57e-10!124;CL:0000860!1.17e-08!45;CL:0000542!1.21e-08!53;CL:0000051!1.21e-08!53;CL:0000838!3.12e-08!52;CL:0002057!6.21e-08!42 | ||
|ontology_enrichment_celltype_v019=CL:0000624;6.00e-16;6!CL:0000771;1.28e-12;2!CL:0000094;4.86e-12;8!CL:0000791;2.42e-11;18!CL:0000789;2.42e-11;18!CL:0002419;2.42e-11;18!CL:0000775;5.36e-09;3!CL:0000081;8.81e-09;11!CL:0000226;1.06e-08;3!CL:0000842;1.06e-08;3!CL:0000084;5.33e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.86e-16,136;CL:0000624,5.16e-16,6;CL:0000771,1.28e-12,2;CL:0002087,1.76e-12,115;CL:0000037,4.08e-12,168;CL:0000094,4.40e-12,8;CL:0000791,2.36e-11,18;CL:0000789,2.36e-11,18;CL:0002420,2.36e-11,18;CL:0002419,2.36e-11,18;CL:0000790,2.36e-11,18;CL:0000988,2.87e-11,177;CL:0002032,3.40e-10,161;CL:0000837,3.40e-10,161;CL:0000838,1.25e-09,52;CL:0000542,2.06e-09,53;CL:0000051,2.06e-09,53;CL:0000775,4.67e-09,3;CL:0002031,5.35e-09,120;CL:0000081,8.21e-09,11;CL:0000226,8.41e-09,3;CL:0000842,8.41e-09,3;CL:0000084,5.24e-08,25;CL:0000827,5.24e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000790;2.42e-11;18!UBERON:0001045;6.48e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;6.48e-07;1!UBERON:0003112;6.48e-07;1!UBERON:0001153;6.48e-07;1!UBERON:0009854;6.48e-07;1!UBERON:0011158;6.48e-07;1!UBERON:0003128;6.48e-07;1!UBERON:0001703;6.48e-07;1!UBERON:0002241;6.48e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003112,5.78e-07,1;UBERON:0011158,5.78e-07,1;UBERON:0003128,5.78e-07,1;UBERON:0001703,5.78e-07,1;UBERON:0002241,5.78e-07,1;UBERON:0004761,5.78e-07,1;UBERON:0009617,5.78e-07,1;UBERON:0001154,6.88e-07,1;UBERON:0001153,6.88e-07,1;UBERON:0001045,6.88e-07,1 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0.572471974262113,0.273748850145768,0.125542639594803,0.152826811495903,0.246301768349837,0.0787107813136792,0,0.383829398097213,0,0,0,0,0.154934401160603,0.568676929949686,0.293600439334847,3.32397245119126,3.20871115952227,0.434021741431704,0,0,0,0.581592955118259,0.377875943688809,0.485168122375632,0.232429036905685,0,0,0.863077176966451,0.256160706529101,0.236482229888585,0.689491361473237,1.29096936716765,0,0.376484679085209,0.272906150057846,0,0.306083892370903,0.320929027076094,0,1.64925650093358,0.997318288108159,0,0,0.56738522469114,0,1.00499466102697,2.60741459210101,0.217188844705117,0.605399502633369,0,0,0,0,0,0.22465726229299,0.300353785683013,0.32145117339416,0,0.19891667719909,0,1.75996244461323,0,0,0.853460445133014,0.800791974072025,0.574752439954483,0,0,0.569212969109448,4.11066032559657,3.82273228125229,0,0,0,2.360517241366,11.3973121197258,1.64481199199607,0.501559486172034,0.977766799900771,0.946895611469467,1.94826728407911,0.111410456885174,2.65145316727353,0.664601683750863,0.270803863765016,1.0247305578054,0.390178042679635,0.328875809207352,0.552700035571697,0.289803085735052,1.03800594213442,0.802622484269139,0,0.226618685395132,0,1.03088233644789,0.759059076058509,0,0.651083453856419,0,0,0.127986611154418,0,0,0,2.01606743224732,5.88368430723716,0.579297615531196,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0.280901613404497,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,5.39068937148793,0.513372145118994,0,0,0,0,0,2.99602809578873,5.9832291840805,0.414415513436035,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,1.86091223510599,3.23571301227925,0.640365346820666,0,0,0,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0.325378394664303,0.412164046590889,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,2.27858874869665,0.476463550915578,0.822724546172388,0,0,1.58625035258854,0.213648142254946,0,0.245040215981032,0.371606350251437,0,0.213425530045242,0,0,0,0.423347165447766,0,0,0.684704037099577,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0.540911356951966,0.33307196799782,0,0,0.146508179271894,0,0.111443384277478,0.284136146806413,0,0.296964680832639,0,0,0.422008249231538,0,0,1.26675244876796,0.398495976502139,1.38141957765574,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0,0,0.344743373241465,0,0.520874984799877,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0.10893846351899,0.139423744278603,0.153900517007594,0.113942055847001,0,0,0.217294743844016,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0.37950746544837,0.158936578980379,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0.313265848516366,0.067401132980677,0,0,0.547364367646998,0.19566461893209,0,0,0,1.22429104652196,0.252746318513952,0.150323419414493,0,0,0,0,0,0.284609546029793,0.277349346026277,0,0,0.0870592065804026,0.698906672968121,0.171986032471617,0.387025325156341,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0,0,0,0.126621591911757,0.586654148204409,0.0801588202515337,0,0,0,0,0.514784993585894,0,0,0,0.135904206073614,0,0.203996435272644,0,0,0.273810757783986,0,0,0.788662062837943,0.558564802544508,0,0.717873024576814,0,0,0.223171457441873,0.134366944973453,0,0,0.157566364614447,0.164831716762333,0.337017719270924,0.295282444544246,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0.387848869084652,0.13223260174269,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0.314108192500469,1.77213635993397,0.244052529803926,0.1251909307065,0.573409195690071,0.221858103073705,0,0.138348634936231,0,0,0.285465333544967,0.235265819698172,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0.337884881306145,0,0,0,0,0.19486030883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| ||
|short_description=p@chr18:2734660..2734665,+ | |short_description=p@chr18:2734660..2734665,+ | ||
}} | }} |
Latest revision as of 00:16, 26 July 2015
Short description: | p@chr18:2734660..2734665, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:2734660..2734665, + |
Coexpression cluster: | C306_CD4_CD8_Neutrophils_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.86e-16 | 136 |
CD4-positive, alpha-beta T cell | 5.16e-16 | 6 |
eosinophil | 1.28e-12 | 2 |
nongranular leukocyte | 1.76e-12 | 115 |
hematopoietic stem cell | 4.08e-12 | 168 |
granulocyte | 4.40e-12 | 8 |
mature alpha-beta T cell | 2.36e-11 | 18 |
alpha-beta T cell | 2.36e-11 | 18 |
immature T cell | 2.36e-11 | 18 |
mature T cell | 2.36e-11 | 18 |
immature alpha-beta T cell | 2.36e-11 | 18 |
hematopoietic cell | 2.87e-11 | 177 |
hematopoietic oligopotent progenitor cell | 3.40e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.40e-10 | 161 |
lymphoid lineage restricted progenitor cell | 1.25e-09 | 52 |
lymphocyte | 2.06e-09 | 53 |
common lymphoid progenitor | 2.06e-09 | 53 |
neutrophil | 4.67e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 5.35e-09 | 120 |
blood cell | 8.21e-09 | 11 |
single nucleate cell | 8.41e-09 | 3 |
mononuclear cell | 8.41e-09 | 3 |
T cell | 5.24e-08 | 25 |
pro-T cell | 5.24e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
olfactory region | 5.78e-07 | 1 |
primary subdivision of skull | 5.78e-07 | 1 |
cranium | 5.78e-07 | 1 |
neurocranium | 5.78e-07 | 1 |
chondrocranium | 5.78e-07 | 1 |
cartilaginous neurocranium | 5.78e-07 | 1 |
head paraxial mesoderm | 5.78e-07 | 1 |
vermiform appendix | 6.88e-07 | 1 |
caecum | 6.88e-07 | 1 |
midgut | 6.88e-07 | 1 |