FFCP PHASE1:Hg19::chr19:28284079..28284110,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:28284079..28284110,- | |||
|coexpression_cluster_id=C2483 | |||
|description=CAGE_peak_at_chr19:28284079..28284110,- | |description=CAGE_peak_at_chr19:28284079..28284110,- | ||
|id=chr19:28284079..28284110,- | |id=chr19:28284079..28284110,- | ||
|ontology_enrichment_celltype=CL:0000066!7.80e-17!254;CL:0000223!4.85e-11!59;CL:0002076!2.11e-09!43;CL:0000548!1.17e-08!679;CL:0000004!1.17e-08!679;CL:0000255!1.17e-08!679;CL:0000012!1.72e-08!682 | |ontology_enrichment_celltype=CL:0000066!7.80e-17!254;CL:0000223!4.85e-11!59;CL:0002076!2.11e-09!43;CL:0000548!1.17e-08!679;CL:0000004!1.17e-08!679;CL:0000255!1.17e-08!679;CL:0000012!1.72e-08!682 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.90e-07;42!CL:0000083;8.01e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.69e-15,253;CL:0000223,2.38e-13,58;CL:0002076,1.15e-08,42 | |||
|ontology_enrichment_development_v019=CL:0000223;9.94e-09;58!UBERON:0001041;4.64e-08;30 | |||
|ontology_enrichment_disease=DOID:162!9.42e-39!235;DOID:14566!7.54e-37!239;DOID:0050687!1.41e-26!143;DOID:305!3.17e-23!106;DOID:0050686!3.19e-21!137;DOID:0050615!5.85e-07!16 | |ontology_enrichment_disease=DOID:162!9.42e-39!235;DOID:14566!7.54e-37!239;DOID:0050687!1.41e-26!143;DOID:305!3.17e-23!106;DOID:0050686!3.19e-21!137;DOID:0050615!5.85e-07!16 | ||
|ontology_enrichment_disease_v019=DOID:0050615;2.83e-08;16!DOID:0050687;4.38e-08;143!DOID:3905;6.09e-08;9!DOID:1324;4.72e-07;15!DOID:305;7.98e-07;106!DOID:1793;8.01e-07;4!DOID:170;9.72e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.40e-29,235;DOID:14566,6.00e-28,239;DOID:0050687,4.21e-21,143;DOID:305,1.65e-19,106;DOID:0050686,1.12e-17,137;DOID:0050615,3.05e-08,16;DOID:3905,6.42e-08,9;DOID:1324,5.06e-07,15;DOID:3093,7.73e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0005911!1.03e-07!82;UBERON:0004119!7.15e-07!169;UBERON:0000925!7.15e-07!169;UBERON:0006595!7.15e-07!169 | |ontology_enrichment_uberon=UBERON:0005911!1.03e-07!82;UBERON:0004119!7.15e-07!169;UBERON:0000925!7.15e-07!169;UBERON:0006595!7.15e-07!169 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.527533956456907,0,0.331397375727916,0,0,0,0,0.369363174230364,0.408001382488506,0.313454721478088,0.286235987131057,0.273748850145768,0.376627918784408,0.0764134057479513,0.164201178899891,0.236132343941038,0,0.383829398097213,0,0,0.30120591877825,1.10926203050036,0.542270404062111,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0.895037932904712,0,0,0,0,0,0.283604451492204,0.886917589850256,0.263504357079378,0.196468613246569,0,1.11235332835329,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0,0,0,1.3082821564276,1.49091585508596,2.15271869829786,0.132409180813219,1.43418310374407,0.354668382198357,1.12135520028461,0,0.74000264525148,0,0.538842688278752,0.163461903113459,0,0,0.468642863667593,0,0,0.149448680551801,0.469737994575059,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0.336672227908132,0,0.277064115484183,0.438977620880838,0,0,0.226864366320042,0,0,0,0,0.103052529238439,0,0.558350568994769,0.337552664482532,0.487185025805993,0.504867548488229,0,0.161646056818812,0.355009592516614,0.201504196455281,0.169560592310488,0.966304265816484,2.18196896472668,0.573609190778008,0,0,0,0,0,1.82488679537915,0,0,0,0,0,0.236613600079688,0.842923450390509,0,0.330881918197182,0.435758888184812,0.237270619111097,0.134831308160164,0,0.769494313892781,0,0,0.8231480226628,0,0,0,0,0,0.491953754172454,0.171567810298526,0.878002283269004,1.1240175325762,1.20634766893957,1.11106134190236,0.325808305310325,0,0,0.231860809950154,0.469634776943287,0.144366447761074,0,0,0,0,0,0.234004265139238,0,1.87467667973554,3.52762469217605,1.70130116690864,2.86587272649115,2.90633938513962,0,0.985326475791887,0.176096868026452,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0.600686115687835,0,0.224262168690721,0,0.1466765716419,0.646358578788889,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,0,0,0.199945982364114,0,0.502257091432126,0,0.718874566474748,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0,0,0.254094624222463,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.713715955188647,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0.248107807818777,0.767309866440312,0.561320188866147,0.384417447767103,1.02341449813341,0.64341568457443,0,0,0,0.0821271560138091,0,0,0.725156697549733,3.00759705454927,0.828728900423067,0.574072240823034,0.364182336013434,0,0.902399225814824,0.385076685522074,0,0,0.73886140225013,1.13733384070897,0,0.431831832204279,0,0,0,0.509752546090077,0,0,0,0,0,0,0.650756789328606,0,18.7717402877604,28.3832679726823,0,0,0,0.290012154876366,0.154048617114644,0.307007349452259,0.413509717453592,0.429680979473094,0.145016693914229,0.255679882248303,0.623224249527161,2.47927373041467,1.15314040419064,0.510450849978337,1.11273558941105,0,0,1.3940745403212,0,0,0,0.37064843820784,0.286249773483982,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.487426979262569,0,0.272999822815972,0,0,0,0,0,0,0,0.202910376962704,0,0.563391205064483,0,0.196498082026242,0,0.709522128141196,0,0,0,0,1.92444225451024,0,0,0,1.72202149068492,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,14.9553699578462,0,5.14584453560167,2.60124445176006,0.144269212976445,0.497992903438899,0.159426272728822,0.59873811429845,0.191505370132367,5.08016598537319,1.62310970137278,0.280797178113459,0.228234679033192,0.626719583092093,0,0.677167111206413,0.481764225311099,0.403599414382095,0,0.343505344755765,0,0,0.500547425135725,0.19538809540204,0.278406173895242,9.84699191581699,2.70455678475983,0,5.63948020351398,0,0,0.728163130497081,0.111443384277478,0.284136146806413,0.23874448473769,0,0.307160702099232,0.994147647766298,0,0.111308705022906,0.329607748453519,0.211125408127993,0.398495976502139,0,0.251932747854276,1.84083628503879,1.47701766553283,0,0.808815160325942,0.537063524026827,0.511572370226872,0.197286811273867,0,0,0,0.0927680981618513,0,0.7812832832557,0,0,0.1137934482855,1.27126825146383,0.945550727071745,0.689486746482929,0,1.04174996959975,0,0,0,0.221158519862449,0,0,3.92178468668365,0.278847488557207,0,0.113942055847001,1.1528195219403,9.3347950186163,0.108647371922008,0,0.366390373607449,0,0,0.156980256395025,0.498635045700469,0.676786981851542,0.19606253431774,0.167821586975843,0,2.06617552674492,1.47698645169619,10.1204341058672,0.282706142867882,2.81305231664718,0,0.0884575645033392,0,8.00607047437679,6.17819694732514,3.9680340812073,0.067401132980677,0,0.234264445725339,1.64209310294099,3.32629852184552,3.3989253134773,0.394584402849391,0,0,0,8.8690817454550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| ||
|short_description=p@chr19:28284079..28284110,- | |short_description=p@chr19:28284079..28284110,- | ||
}} | }} |
Latest revision as of 05:59, 26 July 2015
Short description: | p@chr19:28284079..28284110, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:28284079..28284110, - |
Coexpression cluster: | C2483_Saos2_myeloma_Wilms_medulloblastoma_giant_endometrial_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.69e-15 | 253 |
endodermal cell | 2.38e-13 | 58 |
endo-epithelial cell | 1.15e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.40e-29 | 235 |
disease of cellular proliferation | 6.00e-28 | 239 |
cell type cancer | 4.21e-21 | 143 |
carcinoma | 1.65e-19 | 106 |
organ system cancer | 1.12e-17 | 137 |
respiratory system cancer | 3.05e-08 | 16 |
lung carcinoma | 6.42e-08 | 9 |
lung cancer | 5.06e-07 | 15 |
nervous system cancer | 7.73e-07 | 11 |