FFCP PHASE1:Hg19::chr19:35800815..35800836,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:35800815..35800836,+ | |||
|coexpression_cluster_id=C337 | |coexpression_cluster_id=C337 | ||
|description=CAGE_peak_at_chr19:35800815..35800836,+ | |description=CAGE_peak_at_chr19:35800815..35800836,+ | ||
|id=chr19:35800815..35800836,+ | |id=chr19:35800815..35800836,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000415;2.07e-10;2!CL:0000746;2.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.89e-10,2;CL:0000746,2.32e-07,3;CL:0000513,2.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.12e-15;5!UBERON:0007297;2.07e-10;2!CL:0000513;2.32e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.05e-11!115;UBERON:0001896!1.96e-09!3;UBERON:0005290!1.96e-09!3;UBERON:0010096!1.96e-09!3;UBERON:0002791!3.33e-08!33;UBERON:0001893!6.60e-08!34;UBERON:0001049!6.88e-08!57;UBERON:0005068!6.88e-08!57;UBERON:0006241!6.88e-08!57;UBERON:0007135!6.88e-08!57;UBERON:0000341!1.88e-07!2;UBERON:0002619!6.12e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!8.05e-11!115;UBERON:0001896!1.96e-09!3;UBERON:0005290!1.96e-09!3;UBERON:0010096!1.96e-09!3;UBERON:0002791!3.33e-08!33;UBERON:0001893!6.60e-08!34;UBERON:0001049!6.88e-08!57;UBERON:0005068!6.88e-08!57;UBERON:0006241!6.88e-08!57;UBERON:0007135!6.88e-08!57;UBERON:0000341!1.88e-07!2;UBERON:0002619!6.12e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.88e-19;1!UBERON:0002046;3.12e-15;5!UBERON:0000341;2.99e-10;2!UBERON:0002110;2.32e-07;3!UBERON:0006947;2.32e-07;3!UBERON:0004054;2.32e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.25e-19,1;UBERON:0002046,2.90e-15,5;UBERON:0004117,2.90e-15,5;UBERON:0007689,2.90e-15,5;UBERON:0007123,2.90e-15,5;UBERON:0003091,2.90e-15,5;UBERON:0000341,2.49e-10,2;UBERON:0009722,1.90e-07,11;UBERON:0007690,1.90e-07,11;UBERON:0002110,2.19e-07,3;UBERON:0006242,2.19e-07,3;UBERON:0006947,2.47e-07,3;UBERON:0004054,2.47e-07,3 | |||
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| ||
|short_description=p@chr19:35800815..35800836,+ | |short_description=p@chr19:35800815..35800836,+ | ||
}} | }} |
Latest revision as of 06:41, 26 July 2015
Short description: | p@chr19:35800815..35800836, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:35800815..35800836, + |
Coexpression cluster: | C337_ovary_testis_Adipocyte_mesothelioma_chorionic_placenta_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.89e-10 | 2 |
cardiac muscle cell | 2.32e-07 | 3 |
cardiac muscle myoblast | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epididymis | 2.25e-19 | 1 |
thyroid gland | 2.90e-15 | 5 |
pharyngeal pouch | 2.90e-15 | 5 |
thyroid diverticulum | 2.90e-15 | 5 |
pharyngeal pouch 2 | 2.90e-15 | 5 |
thyroid primordium | 2.90e-15 | 5 |
throat | 2.49e-10 | 2 |
entire pharyngeal arch endoderm | 1.90e-07 | 11 |
early pharyngeal endoderm | 1.90e-07 | 11 |
gallbladder | 2.19e-07 | 3 |
gall bladder primordium | 2.19e-07 | 3 |
male genital duct | 2.47e-07 | 3 |
internal male genitalia | 2.47e-07 | 3 |