FFCP PHASE1:Hg19::chr19:7580234..7580253,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:7580234..7580253,+ | |||
|description=CAGE_peak_at_chr19:7580234..7580253,+ | |description=CAGE_peak_at_chr19:7580234..7580253,+ | ||
|id=chr19:7580234..7580253,+ | |id=chr19:7580234..7580253,+ | ||
|ontology_enrichment_celltype=CL:0000148!9.58e-07!10;CL:0000541!9.58e-07!10 | |ontology_enrichment_celltype=CL:0000148!9.58e-07!10;CL:0000541!9.58e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002367;4.30e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002367,5.20e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.20e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.61e-30!115;UBERON:0001950!3.38e-23!20;UBERON:0002619!5.50e-23!22;UBERON:0001869!1.65e-20!32;UBERON:0002020!5.62e-20!34;UBERON:0003528!5.62e-20!34;UBERON:0000956!1.57e-19!25;UBERON:0000203!1.57e-19!25;UBERON:0001893!7.14e-19!34;UBERON:0002780!7.51e-18!41;UBERON:0001890!7.51e-18!41;UBERON:0006240!7.51e-18!41;UBERON:0002791!1.01e-17!33;UBERON:0001049!2.86e-17!57;UBERON:0005068!2.86e-17!57;UBERON:0006241!2.86e-17!57;UBERON:0007135!2.86e-17!57;UBERON:0003080!3.11e-17!42;UBERON:0002616!2.36e-16!59;UBERON:0003075!7.58e-16!86;UBERON:0007284!7.58e-16!86;UBERON:0000955!8.00e-16!69;UBERON:0006238!8.00e-16!69;UBERON:0002346!1.04e-15!90;UBERON:0000153!1.46e-15!129;UBERON:0007811!1.46e-15!129;UBERON:0000033!2.00e-15!123;UBERON:0003056!1.56e-14!61;UBERON:0000924!3.91e-14!173;UBERON:0006601!3.91e-14!173;UBERON:0004121!4.76e-14!169;UBERON:0001017!2.45e-13!82;UBERON:0000073!3.27e-13!94;UBERON:0001016!3.27e-13!94;UBERON:0005743!5.37e-13!86;UBERON:0000475!1.75e-12!365;UBERON:0004111!3.20e-12!241;UBERON:0000477!6.60e-11!286;UBERON:0000481!4.72e-10!347;UBERON:0000483!4.69e-09!309;UBERON:0001872!7.06e-09!5;UBERON:0000119!8.85e-09!312;UBERON:0001871!9.20e-09!7;UBERON:0002021!4.90e-08!5;UBERON:0000025!5.84e-08!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001872;6.32e-31;5!UBERON:0001950;1.58e-27;20!UBERON:0002619;5.53e-25;22!UBERON:0000956;6.72e-22;25!UBERON:0000203;6.72e-22;25!UBERON:0001893;1.03e-17;34!UBERON:0001869;6.42e-17;32!UBERON:0002780;1.53e-15;41!UBERON:0001890;1.53e-15;41!UBERON:0003528;1.40e-14;34!UBERON:0002020;1.40e-14;34!UBERON:0000007;5.13e-14;2!UBERON:0002791;1.50e-13;32!UBERON:0005969;4.30e-13;2!UBERON:0003956;4.30e-13;2!UBERON:0000073;1.47e-12;53!UBERON:0002616;1.47e-12;53!UBERON:0002021;1.78e-11;5!UBERON:0000200;7.69e-10;6!UBERON:0000955;2.20e-08;68!UBERON:0001017;1.01e-07;75!UBERON:0001016;1.29e-07;83!UBERON:0003296;2.01e-07;4!UBERON:0010133;2.01e-07;4!UBERON:0002581;2.20e-07;1!UBERON:0002902;2.20e-07;1!UBERON:0002171;2.20e-07;1!UBERON:0006518;2.20e-07;1!UBERON:0008949;2.20e-07;1!UBERON:0009899;2.20e-07;1!UBERON:0000101;2.20e-07;1!UBERON:0007190;2.20e-07;1!UBERON:0002167;2.20e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,1.67e-30,5;UBERON:0001950,1.06e-27,20;UBERON:0002619,3.84e-25,22;UBERON:0002780,2.74e-22,41;UBERON:0001890,2.74e-22,41;UBERON:0003080,2.74e-22,41;UBERON:0006240,2.74e-22,41;UBERON:0000956,4.89e-22,25;UBERON:0000203,4.89e-22,25;UBERON:0001869,1.83e-20,32;UBERON:0000073,1.56e-19,53;UBERON:0002616,1.56e-19,53;UBERON:0003056,3.06e-19,61;UBERON:0001893,3.53e-19,34;UBERON:0001049,2.34e-18,56;UBERON:0005068,2.34e-18,56;UBERON:0006241,2.34e-18,56;UBERON:0007135,2.34e-18,56;UBERON:0002791,5.48e-17,32;UBERON:0002346,9.11e-17,86;UBERON:0000955,9.18e-17,68;UBERON:0006238,9.18e-17,68;UBERON:0003528,6.47e-16,34;UBERON:0002020,6.47e-16,34;UBERON:0003075,1.29e-15,82;UBERON:0007284,1.29e-15,82;UBERON:0000007,5.51e-14,2;UBERON:0001017,1.18e-13,81;UBERON:0010371,2.55e-13,104;UBERON:0005969,5.20e-13,2;UBERON:0003956,5.20e-13,2;UBERON:0007023,4.37e-12,114;UBERON:0001016,5.09e-12,89;UBERON:0002021,9.67e-12,5;UBERON:0010314,3.56e-11,132;UBERON:0004121,3.96e-11,171;UBERON:0000924,3.96e-11,171;UBERON:0006601,3.96e-11,171;UBERON:0000200,1.08e-09,6;UBERON:0002902,1.18e-07,1;UBERON:0009899,1.18e-07,1;UBERON:0002581,2.07e-07,1;UBERON:0003296,2.08e-07,4;UBERON:0010133,2.08e-07,4;UBERON:0002171,2.35e-07,1;UBERON:0006518,2.35e-07,1;UBERON:0008949,2.35e-07,1;UBERON:0000101,2.35e-07,1;UBERON:0002167,2.35e-07,1;UBERON:0007190,4.90e-07,1;UBERON:0004111,6.34e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0.56530794192401,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0.937285727335186,0.624320153660641,0,0,0,0,0,0.408308342509787,0.491337269247072,0.619954687054593,0,0.247266929278557,0.910161361938026,1.43723628363248,0.168336113954066,0.250237039743928,1.10825646193673,0,0,0,0,0,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0,0,0,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63497894292169,0.763976851116555,3.51652341630141,0,0.411309970813294,1.20137223137567,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0,1.42977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0.630809660135739,0.117141414992713,0,0,0,0,0,0,0.587403472388222,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0.464845549297286,0,0.6970372701606,0,0,0,0.55597265731176,0.143124886741991,0,0,0,0.511795582622668,0,0,0.78494864019923,0.539617372749944,0.274537029736055,0,0.404364963146632,1.58510321173008,0,0.48763373908959,0,0,0.409499734223957,0.282810863907425,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,1.13841952129715,1.39973888097993,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0.969332746095218,0.649376687132959,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.484945082442097,0,0.225980740780532,0,0,0.759729551470544,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0.399358000997982,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.668245123238271,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,1.24643300672138,0,0,0.129282956361551,0.13223260174269,0,0,0.427149650270779,0.78602152549833,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.500763722825999,0,0.221858103073705,0.496771223531068,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90342715918635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0.215649622793364,0,0,1.01839517972415,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0.513833800771676,1.41696576325585,1.27707087245721,0.615349092722265,0.252071696221718,1.65977405914123,0.968853873791107,0,0,0,0,0,0,0,0.198916222116275,0.82731361184183,0,0,0,0,0,1.01306376927592,3.12431239445539,2.68692835451539,1.14148458349032,1.09394961803644,0,0.496211178389294,0,0,0,0,4.24875922965642,2.50428410486427,0.177404740325278,0,0,1.22345519358297,1.24968269769413,0,0,1.0989032999072,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,1.38251932362818,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0.118920090777569,0,0,0,0.540219106755613,0,0,1.47088993052343,0,0,0,0,0.169927114687817,0,0.257831551894309,0,0,0,0,0,0.458729283404541,0,0,0.747906392100062,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0.56530794192401,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0.937285727335186,0.624320153660641,0,0,0,0,0,0.408308342509787,0.491337269247072,0.619954687054593,0,0.247266929278557,0.910161361938026,1.43723628363248,0.168336113954066,0.250237039743928,1.10825646193673,0,0,0,0,0,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0,0,0,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63497894292169,0.763976851116555,3.51652341630141,0,0.411309970813294,1.20137223137567,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0,1.42977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0.630809660135739,0.117141414992713,0,0,0,0,0,0,0.587403472388222,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0.464845549297286,0,0.6970372701606,0,0,0,0.55597265731176,0.143124886741991,0,0,0,0.511795582622668,0,0,0.78494864019923,0.539617372749944,0.274537029736055,0,0.404364963146632,1.58510321173008,0,0.48763373908959,0,0,0.409499734223957,0.282810863907425,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,1.13841952129715,1.39973888097993,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0.969332746095218,0.649376687132959,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.484945082442097,0,0.225980740780532,0,0,0.759729551470544,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0.399358000997982,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.668245123238271,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,1.24643300672138,0,0,0.129282956361551,0.13223260174269,0,0,0.427149650270779,0.78602152549833,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.500763722825999,0,0.221858103073705,0.496771223531068,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90342715918635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0.215649622793364,0,0,1.01839517972415,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0.513833800771676,1.41696576325585,1.27707087245721,0.615349092722265,0.252071696221718,1.65977405914123,0.968853873791107,0,0,0,0,0,0,0,0.198916222116275,0.82731361184183,0,0,0,0,0,1.01306376927592,3.12431239445539,2.68692835451539,1.14148458349032,1.09394961803644,0,0.496211178389294,0,0,0,0,4.24875922965642,2.50428410486427,0.177404740325278,0,0,1.22345519358297,1.24968269769413,0,0,1.0989032999072,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,1.38251932362818,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0.118920090777569,0,0,0,0.540219106755613,0,0,1.47088993052343,0,0,0,0,0.169927114687817,0,0.257831551894309,0,0,0,0,0,0.458729283404541,0,0,0.747906392100062,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0.665756774185513,0,0 | ||
|short_description=p@chr19:7580234..7580253,+ | |short_description=p@chr19:7580234..7580253,+ | ||
}} | }} |
Latest revision as of 18:26, 27 July 2015
Short description: | p@chr19:7580234..7580253, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:7580234..7580253, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trabecular meshwork cell | 5.20e-13 | 2 |