FFCP PHASE1:Hg19::chr1:153585634..153585651,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=140576 | |EntrezGene=entrezgene:140576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=20441 | |HGNC=HGNC:20441 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q96FQ6 | |UniProt=uniprot:Q96FQ6 | ||
|association_with_transcript=0bp_to_ENST00000368706_5end | |association_with_transcript=0bp_to_ENST00000368706_5end | ||
|cluster_id=chr1:153585634..153585651,- | |||
|coexpression_cluster_id=C226 | |coexpression_cluster_id=C226 | ||
|description=CAGE_peak_7_at_S100A16_5end | |description=CAGE_peak_7_at_S100A16_5end | ||
Revision as of 21:47, 27 July 2015
| Short description: | p7@S100A16 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_7_at_S100A16_5end |
| Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
| Association with transcript: | 0bp_to_ENST00000368706_5end |
| EntrezGene: | 140576 |
| HGNC: | 20441 |
| UniProt: | Q96FQ6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p7@S100A16 |
|---|
0
25
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75
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125
150
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 1.83e-47 | 253 |
| embryonic cell | 1.70e-23 | 250 |
| endo-epithelial cell | 5.67e-21 | 42 |
| endodermal cell | 2.59e-16 | 58 |
| squamous epithelial cell | 5.63e-10 | 63 |
| respiratory epithelial cell | 1.35e-09 | 13 |
| kidney tubule cell | 4.20e-08 | 10 |
| nephron tubule epithelial cell | 4.20e-08 | 10 |
| epithelial cell of alimentary canal | 6.73e-08 | 20 |
| kidney cell | 1.22e-07 | 17 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| endoderm-derived structure | 5.01e-13 | 160 |
| endoderm | 5.01e-13 | 160 |
| presumptive endoderm | 5.01e-13 | 160 |
| trunk | 1.50e-11 | 199 |
| respiratory system | 7.04e-11 | 74 |
| respiratory tract | 1.02e-09 | 54 |
| embryo | 3.02e-09 | 592 |
| segment of respiratory tract | 4.73e-09 | 47 |
| renal system | 9.49e-09 | 48 |
| urinary system structure | 1.05e-08 | 47 |
Showing 1 to 10 of 33 entries
| Ontology term | p-value | n |
|---|---|---|
| carcinoma | 7.21e-18 | 106 |
| cell type cancer | 1.10e-11 | 143 |
| adenocarcinoma | 1.22e-07 | 25 |
| squamous cell carcinoma | 4.85e-07 | 14 |
Showing 1 to 4 of 4 entries
