FFCP PHASE1:Hg19::chr1:179265135..179265140,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:179265135..179265140,+ | |||
|coexpression_cluster_id=C1573 | |||
|description=CAGE_peak_at_chr1:179265135..179265140,+ | |description=CAGE_peak_at_chr1:179265135..179265140,+ | ||
|id=chr1:179265135..179265140,+ | |id=chr1:179265135..179265140,+ | ||
|ontology_enrichment_celltype=CL:0002194!2.23e-29!63;CL:0000576!2.23e-29!63;CL:0000040!2.23e-29!63;CL:0000559!2.23e-29!63;CL:0002009!1.30e-28!65;CL:0000766!1.41e-28!76;CL:0000860!2.57e-28!45;CL:0000557!1.09e-27!71;CL:0002087!1.23e-27!119;CL:0000839!2.09e-27!70;CL:0002057!2.39e-26!42;CL:0000738!7.90e-26!140;CL:0002031!9.83e-25!124;CL:0000037!3.93e-21!172;CL:0000566!3.93e-21!172;CL:0002032!5.56e-21!165;CL:0000837!5.56e-21!165;CL:0000763!1.24e-19!112;CL:0000049!1.24e-19!112;CL:0000988!2.75e-18!182;CL:0000219!7.75e-10!390;CL:0000134!5.17e-09!358;CL:0002320!3.90e-08!365;CL:0002393!8.42e-07!9;CL:0002397!8.42e-07!9 | |ontology_enrichment_celltype=CL:0002194!2.23e-29!63;CL:0000576!2.23e-29!63;CL:0000040!2.23e-29!63;CL:0000559!2.23e-29!63;CL:0002009!1.30e-28!65;CL:0000766!1.41e-28!76;CL:0000860!2.57e-28!45;CL:0000557!1.09e-27!71;CL:0002087!1.23e-27!119;CL:0000839!2.09e-27!70;CL:0002057!2.39e-26!42;CL:0000738!7.90e-26!140;CL:0002031!9.83e-25!124;CL:0000037!3.93e-21!172;CL:0000566!3.93e-21!172;CL:0002032!5.56e-21!165;CL:0000837!5.56e-21!165;CL:0000763!1.24e-19!112;CL:0000049!1.24e-19!112;CL:0000988!2.75e-18!182;CL:0000219!7.75e-10!390;CL:0000134!5.17e-09!358;CL:0002320!3.90e-08!365;CL:0002393!8.42e-07!9;CL:0002397!8.42e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.79e-39;33!CL:0002057;7.79e-39;33!CL:0000576;8.85e-34;48!CL:0000473;5.14e-31;39!CL:0000234;5.14e-31;39!CL:0000766;3.67e-22;69!CL:0002087;3.27e-15;104!CL:0002393;9.13e-11;6!CL:0002397;9.13e-11;6!CL:0000738;3.30e-10;136!CL:0000763;2.16e-09;100!CL:0000623;6.30e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.23e-57,42;CL:0002057,1.23e-57,42;CL:0000473,3.47e-54,48;CL:0000234,3.47e-54,48;CL:0002194,7.11e-53,59;CL:0000576,7.11e-53,59;CL:0000040,7.11e-53,59;CL:0000559,7.11e-53,59;CL:0002009,1.14e-50,61;CL:0000839,3.43e-50,66;CL:0002087,1.28e-49,115;CL:0000557,3.23e-49,67;CL:0000766,5.04e-47,72;CL:0002031,1.74e-44,120;CL:0000738,1.52e-43,136;CL:0000037,9.96e-33,168;CL:0002032,7.40e-31,161;CL:0000837,7.40e-31,161;CL:0000988,4.95e-30,177;CL:0000763,9.07e-28,108;CL:0000049,9.07e-28,108;CL:0002393,8.17e-15,9;CL:0002397,8.17e-15,9;CL:0000134,3.13e-13,354;CL:0002320,1.46e-12,361;CL:0000219,1.86e-12,386;CL:0000048,2.15e-08,427;CL:0000723,5.32e-08,433;CL:0000034,1.70e-07,441;CL:0000623,6.30e-07,3;CL:0000825,6.30e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.78e-39;42!CL:0000049;4.46e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.08e-22!80;UBERON:0001474!1.75e-20!86;UBERON:0002390!2.16e-19!102;UBERON:0003061!2.16e-19!102;UBERON:0002405!4.11e-17!115;UBERON:0002193!5.40e-17!112;UBERON:0004765!2.35e-14!101;UBERON:0001434!2.35e-14!101;UBERON:0002384!1.21e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!3.08e-22!80;UBERON:0001474!1.75e-20!86;UBERON:0002390!2.16e-19!102;UBERON:0003061!2.16e-19!102;UBERON:0002405!4.11e-17!115;UBERON:0002193!5.40e-17!112;UBERON:0004765!2.35e-14!101;UBERON:0001434!2.35e-14!101;UBERON:0002384!1.21e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.51e-43,76;UBERON:0001474,3.04e-39,82;UBERON:0002390,1.26e-38,98;UBERON:0003061,1.26e-38,98;UBERON:0004765,2.10e-34,90;UBERON:0002193,1.63e-33,108;UBERON:0002405,8.32e-33,93;UBERON:0001434,1.86e-29,100;UBERON:0002204,3.12e-14,167;UBERON:0003081,4.20e-14,203;UBERON:0002384,1.18e-11,371 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.85870796139317,0.958120975510189,0.502170558379211,1.22261449196722,0.903106483949403,1.02324015707783,0.786728553697808,0.767658796194425,0.928896739896456,0,0,0,0.852139206383318,0.426507697462265,0.293600439334847,8.30993112797816,15.4419224552009,6.2933152507597,0.895661896959697,2.59114932815184,1.80302897343931,2.76256653681173,1.51150377475524,3.39617685662943,3.0215774797739,5.75635043230556,4.95530193432166,4.31538588483226,1.5369642391746,0.709446689665756,7.58440497620561,4.51839278508678,2.70852973188684,4.1413314699373,1.91034305040492,0.449446968890169,5.50951006267625,2.24650318953266,4.47535988059329,1.64925650093358,0.997318288108159,2.13112375266347,2.90209238628584,2.26954089876456,2.4912889959823,7.03496262718881,5.73631210262222,1.52032191293582,1.81619850790011,1.47311054395026,1.58231193720442,1.47878700418359,1.70083439972035,1.88692780957538,2.2465726229299,2.4028302854641,1.6072558669708,1.71007646244749,1.19350006319454,1.27864907635244,0,0,0,0,0,1.14950487990897,0,0,1.70763890732835,4.11066032559657,0.764546456250458,0,0,0.263384084775077,2.360517241366,4.71612915298998,2.05601498999509,0.334372990781356,0.32592226663359,0.473447805734733,0,0.557052284425868,1.17842362989935,0,1.62482318259009,1.79327847615945,1.30059347559878,2.63100647365882,0.552700035571697,1.44901542867526,0.741432815810302,2.1403266247177,0,0.679856056185397,0,1.37450978193052,1.01207876807801,0.318565414324097,0,0,0,0.127986611154418,1.24930726552346,0.236777252044017,0,2.82249440514625,4.54648332831962,3.76543450095277,2.43806866313962,0,0,0,0,0.289693037921647,0,0.486634870302636,0.189069634328136,0,0.263504357079378,0.261958150995425,0,0,2.59637914923747,1.74129737299267,1.59549552622638,0.476981248610684,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,1.43418310374407,0.709336764396714,0,1.06748995729705,0,0.622422070799533,0.134710672069688,0.163461903113459,0,0,0,0,0.570471821544449,0.448346041655403,0,0.323745888736263,0.421352420106746,0.408308342509787,0.368502951935304,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0,1.25572744982203,0,0.211931901159562,0.300091096084402,0.103052529238439,0.257640540045629,0,1.85653965465393,0.0974370051611986,1.51460264546469,0.184099797284599,0.161646056818812,1.06502877754984,0.201504196455281,0,0,0.272746120590835,0,0,0.132529768321485,0.116193942869518,0,0,0.72995471815166,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.330881918197182,0.217879444092406,0,0.134831308160164,0.784885860501384,0.38474715694639,0,0,0,0,2.53510069643662,1.96565443335525,0.590789906681404,0,0,0,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0.231860809950154,0,0.288732895522148,0,0.380508304469197,0,0,0.246217006087397,0.234004265139238,0.445893486866185,0,0,0,0.0895585227028483,0,0.383382679165211,0,0.176096868026452,1.4512968087854,0.720599767084807,1.51490920111656,0.444485260045183,1.90994212779139,0,0,0.514137463516618,0.300343057843917,0.285826432630578,0.336393253036082,0,0.1466765716419,0,0,0,0.531876233169741,1.04007436911366,0,1.41849132023278,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0.502257091432126,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0.821905290201534,0.537182889719687,0.112085143993527,3.15249216323084,6.90008239550455,4.62034930607094,0.254094624222463,0,0.773288812777695,0,0.637938751653163,2.24702107184155,0,0.828831026872071,0.12269149171914,0,0,0.623912584592421,0.892144943985809,0.788512075169673,0.117141414992713,0,0,0,0.664225598535437,0,0.347534457872331,0,0.343143423810856,2.48121631347465,5.82428342210265,2.13455115606889,0,0,0,0.496215615637554,0.306923946576125,0.280660094433074,0.384417447767103,0,0.321707842287215,0,0,0,0.410635780069046,0.519254429183621,0.348631135379878,0,0,0.368323955743585,0.114814448164607,0.364182336013434,0.786746489756545,0,0,0,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.721287081534056,0.366277859273374,0.660075999364704,0,0,0,0.096670718292122,0.154048617114644,1.22802939780904,0.137836572484531,0.537101224341368,0.435050081742686,0.255679882248303,0.534192213880424,0.165284915360978,0.192190067365106,1.02090169995667,0,0,0,0,0,0,0,0,0.143124886741991,0,0.632758849437452,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0.487426979262569,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.196498082026242,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0.443430153536676,0,1.01489521846434,0,0,0.714695326373367,0,0.648473311192717,0.540031437238115,1.58625035258854,0.106824071127473,0,0.245040215981032,0.371606350251437,0.1442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| ||
|short_description=p@chr1:179265135..179265140,+ | |short_description=p@chr1:179265135..179265140,+ | ||
}} | }} |
Latest revision as of 00:52, 28 July 2015
Short description: | p@chr1:179265135..179265140, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:179265135..179265140, + |
Coexpression cluster: | C1573_CD14_CD8_Natural_Peripheral_CD4_Basophils_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.51e-43 | 76 |
bone element | 3.04e-39 | 82 |
hematopoietic system | 1.26e-38 | 98 |
blood island | 1.26e-38 | 98 |
skeletal element | 2.10e-34 | 90 |
hemolymphoid system | 1.63e-33 | 108 |
immune system | 8.32e-33 | 93 |
skeletal system | 1.86e-29 | 100 |
musculoskeletal system | 3.12e-14 | 167 |
lateral plate mesoderm | 4.20e-14 | 203 |
connective tissue | 1.18e-11 | 371 |