FFCP PHASE1:Hg19::chr1:202318377..202318390,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:202318377..202318390,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr1:202318377..202318390,- | |description=CAGE_peak_at_chr1:202318377..202318390,- | ||
|id=chr1:202318377..202318390,- | |id=chr1:202318377..202318390,- | ||
|ontology_enrichment_celltype=CL:0000860!1.23e-19!45;CL:0000557!7.17e-19!71;CL:0002057!9.42e-19!42;CL:0000766!3.29e-18!76;CL:0002009!1.65e-15!65;CL:0000839!4.25e-15!70;CL:0002194!1.37e-13!63;CL:0000576!1.37e-13!63;CL:0000040!1.37e-13!63;CL:0000559!1.37e-13!63;CL:0000763!4.40e-13!112;CL:0000049!4.40e-13!112;CL:0000134!2.84e-12!358;CL:0002320!3.81e-12!365;CL:0000219!1.12e-10!390;CL:0000048!1.94e-10!430;CL:0000034!2.53e-10!444;CL:0002393!2.70e-10!9;CL:0002397!2.70e-10!9;CL:0000738!5.48e-10!140;CL:0000723!5.90e-10!436;CL:0002031!8.02e-09!124;CL:0002032!7.19e-08!165;CL:0000837!7.19e-08!165;CL:0000037!1.39e-07!172;CL:0000566!1.39e-07!172;CL:0000988!1.44e-07!182 | |ontology_enrichment_celltype=CL:0000860!1.23e-19!45;CL:0000557!7.17e-19!71;CL:0002057!9.42e-19!42;CL:0000766!3.29e-18!76;CL:0002009!1.65e-15!65;CL:0000839!4.25e-15!70;CL:0002194!1.37e-13!63;CL:0000576!1.37e-13!63;CL:0000040!1.37e-13!63;CL:0000559!1.37e-13!63;CL:0000763!4.40e-13!112;CL:0000049!4.40e-13!112;CL:0000134!2.84e-12!358;CL:0002320!3.81e-12!365;CL:0000219!1.12e-10!390;CL:0000048!1.94e-10!430;CL:0000034!2.53e-10!444;CL:0002393!2.70e-10!9;CL:0002397!2.70e-10!9;CL:0000738!5.48e-10!140;CL:0000723!5.90e-10!436;CL:0002031!8.02e-09!124;CL:0002032!7.19e-08!165;CL:0000837!7.19e-08!165;CL:0000037!1.39e-07!172;CL:0000566!1.39e-07!172;CL:0000988!1.44e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.48e-16;2!CL:0001016;1.48e-16;2!CL:0000097;3.24e-15;5!CL:0000767;4.42e-11;3!CL:0000136;8.39e-10;13!CL:0002032;2.93e-09;1!CL:0000557;2.93e-09;1!CL:0000094;4.21e-09;8!CL:0000163;1.13e-08;9!CL:0000453;3.79e-07;5!CL:0000081;9.55e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.03e-16,2;CL:0001016,2.03e-16,2;CL:0000097,3.25e-15,5;CL:0002028,3.25e-15,5;CL:0000767,2.15e-11,3;CL:0000134,1.13e-10,354;CL:0002320,2.20e-10,361;CL:0000557,8.20e-10,67;CL:0000763,1.12e-09,108;CL:0000049,1.12e-09,108;CL:0000219,2.28e-09,386;CL:0000094,2.84e-09,8;CL:0000766,5.17e-09,72;CL:0000163,1.14e-08,9;CL:0000136,1.61e-08,15;CL:0000048,4.01e-08,427;CL:0000723,5.96e-08,433;CL:0000034,9.95e-08,441;CL:0000738,3.56e-07,136;CL:0000453,4.29e-07,5;CL:0000081,7.21e-07,11;CL:0002032,8.67e-07,161;CL:0000837,8.67e-07,161 | |||
|ontology_enrichment_development_v019=UBERON:0003099;6.21e-09;1!UBERON:0003852;6.21e-09;1 | |||
|ontology_enrichment_disease=DOID:2394!1.54e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.53e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.39e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001474!4.85e-18!86;UBERON:0002371!6.87e-18!80;UBERON:0004765!1.47e-14!101;UBERON:0001434!1.47e-14!101;UBERON:0002390!2.09e-13!102;UBERON:0003061!2.09e-13!102;UBERON:0002384!1.08e-11!375;UBERON:0002193!3.27e-11!112;UBERON:0002405!9.07e-11!115;UBERON:0003081!9.35e-08!216;UBERON:0002204!2.58e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;6.21e-09;1!UBERON:0008193;6.21e-09;1!UBERON:0010912;6.21e-09;1!UBERON:0002514;6.21e-09;1!UBERON:0003457;6.21e-09;1!UBERON:0008907;6.21e-09;1!UBERON:0008001;6.21e-09;1!UBERON:0007213;6.21e-09;1!UBERON:0009891;6.21e-09;1!UBERON:0007914;6.21e-09;1!UBERON:0007375;6.21e-09;1!UBERON:0003323;6.21e-09;1!UBERON:0010258;6.21e-09;1!UBERON:0005253;6.21e-09;1!UBERON:0007842;6.21e-09;1!UBERON:0002397;6.21e-09;1!UBERON:0003113;6.21e-09;1!UBERON:0003277;6.21e-09;1!UBERON:0001709;6.21e-09;1!UBERON:0002244;6.21e-09;1!UBERON:0005620;6.21e-09;1!UBERON:0010364;6.21e-09;1!UBERON:0004288;6.21e-09;1!UBERON:0002119;1.09e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.43e-10,371;UBERON:0001474,2.10e-09,82;UBERON:0005705,9.91e-09,1;UBERON:0008193,9.91e-09,1;UBERON:0010912,9.91e-09,1;UBERON:0002514,9.91e-09,1;UBERON:0003457,9.91e-09,1;UBERON:0008907,9.91e-09,1;UBERON:0008001,9.91e-09,1;UBERON:0007213,9.91e-09,1;UBERON:0009891,9.91e-09,1;UBERON:0007914,9.91e-09,1;UBERON:0009292,9.91e-09,1;UBERON:0003099,9.91e-09,1;UBERON:0007375,9.91e-09,1;UBERON:0003323,9.91e-09,1;UBERON:0010258,9.91e-09,1;UBERON:0007842,9.91e-09,1;UBERON:0009494,9.91e-09,1;UBERON:0010042,9.91e-09,1;UBERON:0010045,9.91e-09,1;UBERON:0010259,9.91e-09,1;UBERON:0010359,9.91e-09,1;UBERON:0009526,9.91e-09,1;UBERON:0002397,9.91e-09,1;UBERON:0003113,9.91e-09,1;UBERON:0003277,9.91e-09,1;UBERON:0001709,9.91e-09,1;UBERON:0004066,9.91e-09,1;UBERON:0002244,9.91e-09,1;UBERON:0005620,9.91e-09,1;UBERON:0004362,9.91e-09,1;UBERON:0010364,9.91e-09,1;UBERON:0010046,9.91e-09,1;UBERON:0005868,9.91e-09,1;UBERON:0007238,9.91e-09,1;UBERON:0004288,9.91e-09,1;UBERON:0004068,9.91e-09,1;UBERON:0010334,9.91e-09,1;UBERON:0003852,9.91e-09,1;UBERON:0010253,9.91e-09,1;UBERON:0002119,1.16e-08,4;UBERON:0002371,1.78e-08,76;UBERON:0004765,2.05e-08,90;UBERON:0001434,2.12e-07,100 | |||
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|short_description=p@chr1:202318377..202318390,- | |short_description=p@chr1:202318377..202318390,- | ||
}} | }} |
Latest revision as of 02:17, 28 July 2015
Short description: | p@chr1:202318377..202318390, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:202318377..202318390, - |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.03e-16 | 2 |
immature CD1a-positive Langerhans cell | 2.03e-16 | 2 |
mast cell | 3.25e-15 | 5 |
basophil mast progenitor cell | 3.25e-15 | 5 |
basophil | 2.15e-11 | 3 |
mesenchymal cell | 1.13e-10 | 354 |
connective tissue cell | 2.20e-10 | 361 |
granulocyte monocyte progenitor cell | 8.20e-10 | 67 |
myeloid cell | 1.12e-09 | 108 |
common myeloid progenitor | 1.12e-09 | 108 |
motile cell | 2.28e-09 | 386 |
granulocyte | 2.84e-09 | 8 |
myeloid leukocyte | 5.17e-09 | 72 |
endocrine cell | 1.14e-08 | 9 |
fat cell | 1.61e-08 | 15 |
multi fate stem cell | 4.01e-08 | 427 |
somatic stem cell | 5.96e-08 | 433 |
stem cell | 9.95e-08 | 441 |
leukocyte | 3.56e-07 | 136 |
Langerhans cell | 4.29e-07 | 5 |
blood cell | 7.21e-07 | 11 |
hematopoietic oligopotent progenitor cell | 8.67e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.67e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.39e-09 | 14 |