FFCP PHASE1:Hg19::chr1:8311992..8312003,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:8311992..8312003,+ | |||
|coexpression_cluster_id=C1392 | |coexpression_cluster_id=C1392 | ||
|description=CAGE_peak_at_chr1:8311992..8312003,+ | |description=CAGE_peak_at_chr1:8311992..8312003,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;2.74e-09;5 | |ontology_enrichment_development_v019=UBERON:0007123;2.74e-09;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!1.05e-20!2;UBERON:0002171!1.06e-11!1;UBERON:0006518!1.06e-11!1;UBERON:0008949!1.06e-11!1;UBERON:0000101!1.06e-11!1;UBERON:0002167!1.06e-11!1;UBERON:0002046!4.68e-09!5;UBERON:0004117!4.68e-09!5;UBERON:0007689!4.68e-09!5;UBERON:0007123!4.68e-09!5;UBERON:0003091!4.68e-09!5;UBERON:0005178!2.88e-07!34;UBERON:0002224!2.88e-07!34;UBERON:0005181!4.70e-07!35 | |ontology_enrichment_uberon=UBERON:0003127!1.05e-20!2;UBERON:0002171!1.06e-11!1;UBERON:0006518!1.06e-11!1;UBERON:0008949!1.06e-11!1;UBERON:0000101!1.06e-11!1;UBERON:0002167!1.06e-11!1;UBERON:0002046!4.68e-09!5;UBERON:0004117!4.68e-09!5;UBERON:0007689!4.68e-09!5;UBERON:0007123!4.68e-09!5;UBERON:0003091!4.68e-09!5;UBERON:0005178!2.88e-07!34;UBERON:0002224!2.88e-07!34;UBERON:0005181!4.70e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.48e-40;1!UBERON:0006518;1.48e-40;1!UBERON:0008949;1.48e-40;1!UBERON:0000101;1.48e-40;1!UBERON:0002167;1.48e-40;1!UBERON:0001896;1.96e-14;3!UBERON:0005290;1.96e-14;3!UBERON:0002046;2.74e-09;5!UBERON:0002048;2.93e-08;22!UBERON:0000117;2.93e-08;22!UBERON:0000171;2.93e-08;22!UBERON:0000170;2.93e-08;22!UBERON:0002298;7.01e-08;6 | |ontology_enrichment_uberon_v019=UBERON:0002171;1.48e-40;1!UBERON:0006518;1.48e-40;1!UBERON:0008949;1.48e-40;1!UBERON:0000101;1.48e-40;1!UBERON:0002167;1.48e-40;1!UBERON:0001896;1.96e-14;3!UBERON:0005290;1.96e-14;3!UBERON:0002046;2.74e-09;5!UBERON:0002048;2.93e-08;22!UBERON:0000117;2.93e-08;22!UBERON:0000171;2.93e-08;22!UBERON:0000170;2.93e-08;22!UBERON:0002298;7.01e-08;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.48e-40,1;UBERON:0006518,1.48e-40,1;UBERON:0008949,1.48e-40,1;UBERON:0000101,1.48e-40,1;UBERON:0002167,1.48e-40,1;UBERON:0001896,2.09e-14,3;UBERON:0005290,2.09e-14,3;UBERON:0010096,2.09e-14,3;UBERON:0002046,2.74e-09,5;UBERON:0004117,2.74e-09,5;UBERON:0007689,2.74e-09,5;UBERON:0007123,2.74e-09,5;UBERON:0003091,2.74e-09,5;UBERON:0002048,2.93e-08,22;UBERON:0000117,2.93e-08,22;UBERON:0000171,2.93e-08,22;UBERON:0000170,2.93e-08,22;UBERON:0005597,2.93e-08,22;UBERON:0000118,2.93e-08,22;UBERON:0002298,7.25e-08,6 | |||
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|short_description=p@chr1:8311992..8312003,+ | |short_description=p@chr1:8311992..8312003,+ | ||
}} | }} |
Latest revision as of 10:37, 28 July 2015
Short description: | p@chr1:8311992..8312003, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:8311992..8312003, + |
Coexpression cluster: | C1392_lung_thyroid_chorionic_epididymis_throat_seminal_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.48e-40 | 1 |
right lung lobe | 1.48e-40 | 1 |
lower lobe of lung | 1.48e-40 | 1 |
lobe of lung | 1.48e-40 | 1 |
right lung | 1.48e-40 | 1 |
medulla oblongata | 2.09e-14 | 3 |
myelencephalon | 2.09e-14 | 3 |
future myelencephalon | 2.09e-14 | 3 |
thyroid gland | 2.74e-09 | 5 |
pharyngeal pouch | 2.74e-09 | 5 |
thyroid diverticulum | 2.74e-09 | 5 |
pharyngeal pouch 2 | 2.74e-09 | 5 |
thyroid primordium | 2.74e-09 | 5 |
lung | 2.93e-08 | 22 |
respiratory tube | 2.93e-08 | 22 |
respiration organ | 2.93e-08 | 22 |
pair of lungs | 2.93e-08 | 22 |
lung primordium | 2.93e-08 | 22 |
lung bud | 2.93e-08 | 22 |
brainstem | 7.25e-08 | 6 |