FFCP PHASE1:Hg19::chr1:840237..840249,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:840237..840249,+ | |||
|coexpression_cluster_id=C3998 | |||
|description=CAGE_peak_at_chr1:840237..840249,+ | |description=CAGE_peak_at_chr1:840237..840249,+ | ||
|id=chr1:840237..840249,+ | |id=chr1:840237..840249,+ | ||
|ontology_enrichment_celltype=CL:0000133!1.41e-07!59 | |ontology_enrichment_celltype=CL:0000133!1.41e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.14e-10;23!CL:0002581;3.56e-08;1!CL:0000333;1.00e-06;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.26e-10,23;CL:0002581,2.69e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.50e-10;3!UBERON:0005425;3.56e-08;1 | |||
|ontology_enrichment_disease=DOID:171!7.00e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;6.11e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.15e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;3.73e-15;2!UBERON:0000941;3.56e-08;1!UBERON:0001785;3.56e-08;1!UBERON:0002464;3.56e-08;1!UBERON:0004904;3.56e-08;1!UBERON:0001021;3.56e-08;1!UBERON:0000010;1.15e-07;8!UBERON:0004457;1.67e-07;9!UBERON:0000042;1.67e-07;9!UBERON:0000013;1.00e-06;5!UBERON:0002410;1.00e-06;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,3.61e-15,2;UBERON:0000966,6.69e-11,6;UBERON:0005388,6.69e-11,6;UBERON:0001802,6.69e-11,6;UBERON:0000941,3.33e-08,1;UBERON:0001785,3.33e-08,1;UBERON:0002464,3.33e-08,1;UBERON:0004904,3.33e-08,1;UBERON:0001021,3.33e-08,1;UBERON:0003902,3.33e-08,1;UBERON:0005425,3.33e-08,1;UBERON:0001781,9.78e-08,4;UBERON:0000010,1.12e-07,8;UBERON:0002097,1.54e-07,41;UBERON:0000013,9.87e-07,5;UBERON:0002410,9.87e-07,5 | |||
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| ||
|short_description=p@chr1:840237..840249,+ | |short_description=p@chr1:840237..840249,+ | ||
}} | }} |
Latest revision as of 10:38, 28 July 2015
Short description: | p@chr1:840237..840249, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:840237..840249, + |
Coexpression cluster: | C3998_merkel_neuroepithelioma_small_medulloblastoma_acute_Hodgkin_retinoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.26e-10 | 23 |
perirenal preadipocyte | 2.69e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 3.61e-15 | 2 |
retina | 6.69e-11 | 6 |
photoreceptor array | 6.69e-11 | 6 |
posterior segment of eyeball | 6.69e-11 | 6 |
cranial nerve II | 3.33e-08 | 1 |
cranial nerve | 3.33e-08 | 1 |
nerve trunk | 3.33e-08 | 1 |
nerve connecting eye with brain | 3.33e-08 | 1 |
nerve | 3.33e-08 | 1 |
retinal neural layer | 3.33e-08 | 1 |
presumptive neural retina | 3.33e-08 | 1 |
layer of retina | 9.78e-08 | 4 |
peripheral nervous system | 1.12e-07 | 8 |
skin of body | 1.54e-07 | 41 |
sympathetic nervous system | 9.87e-07 | 5 |
autonomic nervous system | 9.87e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.15e-07 | 10 |