FFCP PHASE1:Hg19::chr20:30574762..30574771,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:30574762..30574771,+ | |||
|coexpression_cluster_id=C705 | |||
|description=CAGE_peak_at_chr20:30574762..30574771,+ | |description=CAGE_peak_at_chr20:30574762..30574771,+ | ||
|id=chr20:30574762..30574771,+ | |id=chr20:30574762..30574771,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.23e-38;3 | |||
|ontology_enrichment_disease=DOID:169!2.17e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:3119;4.21e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,4.56e-09,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;6.48e-20;6!UBERON:0000007;2.05e-15;2!UBERON:0002702;2.05e-15;2!UBERON:0002680;1.23e-13;9!UBERON:0001895;1.23e-13;9!UBERON:0000073;1.14e-11;53!UBERON:0002616;1.14e-11;53!UBERON:0001870;9.90e-11;3!UBERON:0004733;1.76e-10;12!UBERON:0002028;1.76e-10;12!UBERON:0004732;9.51e-10;13!UBERON:0003296;2.26e-08;4!UBERON:0010133;2.26e-08;4!UBERON:0001016;1.12e-07;83!UBERON:0001872;6.04e-07;5 | |||
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|short_description=p@chr20:30574762..30574771,+ | |short_description=p@chr20:30574762..30574771,+ | ||
}} | }} |
Latest revision as of 12:54, 28 July 2015
Short description: | p@chr20:30574762..30574771, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:30574762..30574771, + |
Coexpression cluster: | C705_small_cerebellum_parietal_occipital_temporal_amygdala_olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.48e-20 | 6 |
rhombic lip | 6.48e-20 | 6 |
middle frontal gyrus | 1.54e-15 | 2 |
pituitary gland | 2.37e-15 | 2 |
regional part of metencephalon | 1.23e-13 | 9 |
metencephalon | 1.23e-13 | 9 |
future metencephalon | 1.23e-13 | 9 |
regional part of nervous system | 1.86e-13 | 53 |
regional part of brain | 1.86e-13 | 53 |
neural tube | 9.09e-13 | 56 |
neural rod | 9.09e-13 | 56 |
future spinal cord | 9.09e-13 | 56 |
neural keel | 9.09e-13 | 56 |
frontal cortex | 8.17e-11 | 3 |
segmental subdivision of hindbrain | 1.77e-10 | 12 |
hindbrain | 1.77e-10 | 12 |
presumptive hindbrain | 1.77e-10 | 12 |
brain | 1.85e-10 | 68 |
future brain | 1.85e-10 | 68 |
segmental subdivision of nervous system | 9.51e-10 | 13 |
central nervous system | 7.26e-09 | 81 |
neural plate | 7.26e-09 | 82 |
presumptive neural plate | 7.26e-09 | 82 |
posterior neural tube | 1.42e-08 | 15 |
chordal neural plate | 1.42e-08 | 15 |
neurectoderm | 1.81e-08 | 86 |
gland of diencephalon | 2.43e-08 | 4 |
neuroendocrine gland | 2.43e-08 | 4 |
nervous system | 5.05e-08 | 89 |
ecto-epithelium | 4.67e-07 | 104 |
parietal lobe | 5.70e-07 | 5 |
regional part of forebrain | 9.42e-07 | 41 |
forebrain | 9.42e-07 | 41 |
anterior neural tube | 9.42e-07 | 41 |
future forebrain | 9.42e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.56e-09 | 14 |