FFCP PHASE1:Hg19::chr20:62708698..62708701,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:62708698..62708701,+ | |||
|coexpression_cluster_id=C560 | |||
|description=CAGE_peak_at_chr20:62708698..62708701,+ | |description=CAGE_peak_at_chr20:62708698..62708701,+ | ||
|id=chr20:62708698..62708701,+ | |id=chr20:62708698..62708701,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.91e-65!42;CL:0000037!2.77e-62!172;CL:0000566!2.77e-62!172;CL:0000860!8.52e-60!45;CL:0000738!1.19e-59!140;CL:0000766!2.55e-58!76;CL:0000988!6.55e-58!182;CL:0002032!3.81e-55!165;CL:0000837!3.81e-55!165;CL:0000763!1.59e-53!112;CL:0000049!1.59e-53!112;CL:0002087!6.75e-46!119;CL:0002194!6.81e-44!63;CL:0000576!6.81e-44!63;CL:0000040!6.81e-44!63;CL:0000559!6.81e-44!63;CL:0000839!2.47e-43!70;CL:0000557!1.43e-42!71;CL:0002009!3.13e-42!65;CL:0002031!1.30e-41!124;CL:0000134!8.45e-21!358;CL:0002320!4.61e-20!365;CL:0002393!8.61e-18!9;CL:0002397!8.61e-18!9;CL:0000219!1.82e-17!390;CL:0000094!2.39e-16!8;CL:0000048!2.28e-14!430;CL:0000034!4.21e-14!444;CL:0000723!6.28e-14!436;CL:0000081!1.58e-11!11;CL:0000775!2.71e-09!3;CL:0000875!4.02e-09!3;CL:0002396!4.02e-09!3;CL:0000784!1.53e-08!3;CL:0000842!1.01e-07!3 | |ontology_enrichment_celltype=CL:0002057!7.91e-65!42;CL:0000037!2.77e-62!172;CL:0000566!2.77e-62!172;CL:0000860!8.52e-60!45;CL:0000738!1.19e-59!140;CL:0000766!2.55e-58!76;CL:0000988!6.55e-58!182;CL:0002032!3.81e-55!165;CL:0000837!3.81e-55!165;CL:0000763!1.59e-53!112;CL:0000049!1.59e-53!112;CL:0002087!6.75e-46!119;CL:0002194!6.81e-44!63;CL:0000576!6.81e-44!63;CL:0000040!6.81e-44!63;CL:0000559!6.81e-44!63;CL:0000839!2.47e-43!70;CL:0000557!1.43e-42!71;CL:0002009!3.13e-42!65;CL:0002031!1.30e-41!124;CL:0000134!8.45e-21!358;CL:0002320!4.61e-20!365;CL:0002393!8.61e-18!9;CL:0002397!8.61e-18!9;CL:0000219!1.82e-17!390;CL:0000094!2.39e-16!8;CL:0000048!2.28e-14!430;CL:0000034!4.21e-14!444;CL:0000723!6.28e-14!436;CL:0000081!1.58e-11!11;CL:0000775!2.71e-09!3;CL:0000875!4.02e-09!3;CL:0002396!4.02e-09!3;CL:0000784!1.53e-08!3;CL:0000842!1.01e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.21e-32;8!CL:0000766;1.31e-24;69!CL:0000081;1.25e-23;11!CL:0000576;3.12e-23;48!CL:0000775;4.50e-23;3!CL:0000875;9.74e-23;3!CL:0002396;9.74e-23;3!CL:0000860;3.59e-19;33!CL:0002057;3.59e-19;33!CL:0000771;8.64e-16;2!CL:0000473;4.53e-14;39!CL:0000234;4.53e-14;39!CL:0002393;4.27e-11;6!CL:0002397;4.27e-11;6!CL:0000763;1.76e-10;100!CL:0000784;2.61e-10;3!CL:0000738;4.46e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.17e-48,72;CL:0000860,2.90e-40,42;CL:0002057,2.90e-40,42;CL:0000473,7.41e-35,48;CL:0000234,7.41e-35,48;CL:0000094,8.51e-33,8;CL:0000738,3.56e-31,136;CL:0000763,9.05e-31,108;CL:0000049,9.05e-31,108;CL:0002393,3.27e-28,9;CL:0002397,3.27e-28,9;CL:0000839,2.01e-27,66;CL:0002194,2.78e-27,59;CL:0000576,2.78e-27,59;CL:0000040,2.78e-27,59;CL:0000559,2.78e-27,59;CL:0000557,5.66e-27,67;CL:0002009,2.64e-26,61;CL:0000037,1.88e-24,168;CL:0000081,9.73e-24,11;CL:0000775,3.89e-23,3;CL:0000988,5.38e-23,177;CL:0000875,1.17e-22,3;CL:0002396,1.17e-22,3;CL:0002032,2.16e-21,161;CL:0000837,2.16e-21,161;CL:0000771,8.04e-16,2;CL:0002031,1.17e-15,120;CL:0002087,1.64e-14,115;CL:0000784,1.79e-10,3;CL:0000134,2.82e-09,354;CL:0002320,5.25e-09,361;CL:0000219,4.69e-08,386;CL:0000048,6.88e-07,427;CL:0000723,9.98e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.81e-31;42!CL:0000049;2.34e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.01e-47!102;UBERON:0003061!3.01e-47!102;UBERON:0002193!7.86e-42!112;UBERON:0002371!1.42e-36!80;UBERON:0001474!2.85e-33!86;UBERON:0004765!9.81e-27!101;UBERON:0001434!9.81e-27!101;UBERON:0002405!2.94e-26!115;UBERON:0002384!4.67e-19!375;UBERON:0003081!2.36e-15!216;UBERON:0002204!4.35e-12!167;UBERON:0000178!2.67e-09!15;UBERON:0000179!2.67e-09!15;UBERON:0000463!2.67e-09!15 | |ontology_enrichment_uberon=UBERON:0002390!3.01e-47!102;UBERON:0003061!3.01e-47!102;UBERON:0002193!7.86e-42!112;UBERON:0002371!1.42e-36!80;UBERON:0001474!2.85e-33!86;UBERON:0004765!9.81e-27!101;UBERON:0001434!9.81e-27!101;UBERON:0002405!2.94e-26!115;UBERON:0002384!4.67e-19!375;UBERON:0003081!2.36e-15!216;UBERON:0002204!4.35e-12!167;UBERON:0000178!2.67e-09!15;UBERON:0000179!2.67e-09!15;UBERON:0000463!2.67e-09!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.92e-23,76;UBERON:0002390,3.19e-22,98;UBERON:0003061,3.19e-22,98;UBERON:0001474,1.63e-21,82;UBERON:0002193,7.44e-20,108;UBERON:0004765,2.45e-19,90;UBERON:0002405,1.29e-18,93;UBERON:0001434,4.22e-17,100;UBERON:0002204,5.53e-09,167;UBERON:0003081,6.34e-09,203;UBERON:0002384,1.23e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.157421562627358,1.57345710739562,0,0.77408061658038,0,0,0,0.0774672005803016,0,0,0,0.401088894940283,0.434021741431704,0,0,0,2.90796477559129,3.02300754951048,2.18325655069035,1.16214518452842,1.23350366406548,0.929119112685311,0.28769239232215,0.256160706529101,0.236482229888585,0,1.29096936716765,0,1.88242339542605,1.36453075028923,2.47195832889593,0.306083892370903,0,0,0.989553900560148,0.997318288108159,1.27867425159808,0.290209238628584,0.56738522469114,0.622822248995575,0,0.521482918420201,0.434377689410233,0.605399502633369,0,0.316462387440884,1.90129757680748,1.06302149982522,1.46761051855863,0.112328631146495,0.150176892841506,0.48217676009124,5.13022938734247,4.57508357557907,1.27864907635244,0,0.546138611262131,0,3.41384178053206,0,0,0,0,0.569212969109448,0,0.764546456250458,0,0.560508562981536,0,0.196709770113833,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,1.71598473234038,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58531948758658,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,5.99205619157746,2.99161459204025,4.14415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,1.13929437434833,0.714695326373367,0,0.648473311192717,1.08006287447623,0,0,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0.211673582723883,0.324621940274555,0,0.228234679033192,0.626719583092093,0,0,0.1605880751037,0.80719882876419,0,0,0,0,0.166849141711909,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.157421562627358,1.57345710739562,0,0.77408061658038,0,0,0,0.0774672005803016,0,0,0,0.401088894940283,0.434021741431704,0,0,0,2.90796477559129,3.02300754951048,2.18325655069035,1.16214518452842,1.23350366406548,0.929119112685311,0.28769239232215,0.256160706529101,0.236482229888585,0,1.29096936716765,0,1.88242339542605,1.36453075028923,2.47195832889593,0.306083892370903,0,0,0.989553900560148,0.997318288108159,1.27867425159808,0.290209238628584,0.56738522469114,0.622822248995575,0,0.521482918420201,0.434377689410233,0.605399502633369,0,0.316462387440884,1.90129757680748,1.06302149982522,1.46761051855863,0.112328631146495,0.150176892841506,0.48217676009124,5.13022938734247,4.57508357557907,1.27864907635244,0,0.546138611262131,0,3.41384178053206,0,0,0,0,0.569212969109448,0,0.764546456250458,0,0.560508562981536,0,0.196709770113833,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,1.71598473234038,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58531948758658,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,5.99205619157746,2.99161459204025,4.14415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,1.13929437434833,0.714695326373367,0,0.648473311192717,1.08006287447623,0,0,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0.211673582723883,0.324621940274555,0,0.228234679033192,0.626719583092093,0,0,0.1605880751037,0.80719882876419,0,0,0,0,0.166849141711909,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:62708698..62708701,+ | |short_description=p@chr20:62708698..62708701,+ | ||
}} | }} |
Latest revision as of 16:30, 28 July 2015
Short description: | p@chr20:62708698..62708701, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:62708698..62708701, + |
Coexpression cluster: | C560_Neutrophils_Eosinophils_CD14CD16_Whole_CD14_acute_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.92e-23 | 76 |
hematopoietic system | 3.19e-22 | 98 |
blood island | 3.19e-22 | 98 |
bone element | 1.63e-21 | 82 |
hemolymphoid system | 7.44e-20 | 108 |
skeletal element | 2.45e-19 | 90 |
immune system | 1.29e-18 | 93 |
skeletal system | 4.22e-17 | 100 |
musculoskeletal system | 5.53e-09 | 167 |
lateral plate mesoderm | 6.34e-09 | 203 |
connective tissue | 1.23e-08 | 371 |