FFCP PHASE1:Hg19::chr21:43859686..43859724,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:43859686..43859724,+ | |||
|coexpression_cluster_id=C2634 | |||
|description=CAGE_peak_at_chr21:43859686..43859724,+ | |description=CAGE_peak_at_chr21:43859686..43859724,+ | ||
|id=chr21:43859686..43859724,+ | |id=chr21:43859686..43859724,+ | ||
|ontology_enrichment_celltype=CL:0000084!2.06e-28!25;CL:0000827!2.06e-28!25;CL:0000791!8.00e-22!18;CL:0000789!8.00e-22!18;CL:0002420!8.00e-22!18;CL:0002419!8.00e-22!18;CL:0000790!8.00e-22!18;CL:0000838!3.60e-20!52;CL:0000542!1.32e-19!53;CL:0000051!1.32e-19!53;CL:0000625!1.86e-14!11;CL:0000988!8.10e-13!182;CL:0000037!2.81e-12!172;CL:0000566!2.81e-12!172;CL:0002087!2.72e-11!119;CL:0000738!4.06e-11!140;CL:0000624!1.12e-10!6;CL:0002032!1.66e-10!165;CL:0000837!1.66e-10!165;CL:0002031!3.93e-10!124;CL:0000080!3.10e-09!6 | |ontology_enrichment_celltype=CL:0000084!2.06e-28!25;CL:0000827!2.06e-28!25;CL:0000791!8.00e-22!18;CL:0000789!8.00e-22!18;CL:0002420!8.00e-22!18;CL:0002419!8.00e-22!18;CL:0000790!8.00e-22!18;CL:0000838!3.60e-20!52;CL:0000542!1.32e-19!53;CL:0000051!1.32e-19!53;CL:0000625!1.86e-14!11;CL:0000988!8.10e-13!182;CL:0000037!2.81e-12!172;CL:0000566!2.81e-12!172;CL:0002087!2.72e-11!119;CL:0000738!4.06e-11!140;CL:0000624!1.12e-10!6;CL:0002032!1.66e-10!165;CL:0000837!1.66e-10!165;CL:0002031!3.93e-10!124;CL:0000080!3.10e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.68e-41;25!CL:0000791;2.46e-39;18!CL:0000789;2.46e-39;18!CL:0002419;2.46e-39;18!CL:0000624;9.61e-23;6!CL:0000625;9.75e-22;11!CL:0000542;1.09e-12;53!CL:0000898;9.23e-12;3!CL:0000623;9.23e-12;3!CL:0000815;2.12e-08;2!CL:0000792;2.12e-08;2!CL:0002677;2.12e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,9.15e-42,25;CL:0000827,9.15e-42,25;CL:0000791,1.14e-39,18;CL:0000789,1.14e-39,18;CL:0002420,1.14e-39,18;CL:0002419,1.14e-39,18;CL:0000790,1.14e-39,18;CL:0000838,3.78e-25,52;CL:0000542,1.40e-24,53;CL:0000051,1.40e-24,53;CL:0000624,3.13e-23,6;CL:0000625,1.07e-21,11;CL:0000898,4.56e-12,3;CL:0000623,1.43e-11,3;CL:0000825,1.43e-11,3;CL:0002087,8.90e-10,115;CL:0000815,1.06e-08,2;CL:0000792,1.06e-08,2;CL:0002677,1.06e-08,2;CL:0002031,4.07e-08,120;CL:0000738,1.47e-07,136;CL:0000988,6.91e-07,177;CL:0000037,9.42e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;2.46e-39;18!CL:0000051;1.09e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.52e-18!15;UBERON:0000179!1.52e-18!15;UBERON:0000463!1.52e-18!15;UBERON:0004177!5.57e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.97e-15;15!UBERON:0000179;5.97e-15;15!UBERON:0000463;5.97e-15;15!UBERON:0002390;5.47e-09;32!UBERON:0002370;6.57e-09;2!UBERON:0005058;6.57e-09;2!UBERON:0009113;6.57e-09;2!UBERON:0002193;5.52e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.15e-15,15;UBERON:0000179,7.15e-15,15;UBERON:0000463,7.15e-15,15;UBERON:0002370,2.29e-09,4;UBERON:0005058,2.29e-09,4;UBERON:0009113,2.29e-09,4;UBERON:0003295,2.29e-09,4;UBERON:0005562,2.29e-09,4 | |||
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| ||
|short_description=p@chr21:43859686..43859724,+ | |short_description=p@chr21:43859686..43859724,+ | ||
}} | }} |
Latest revision as of 18:10, 28 July 2015
Short description: | p@chr21:43859686..43859724, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:43859686..43859724, + |
Coexpression cluster: | C2634_acute_CD4_thymus_CD8_Whole_Peripheral_chronic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 9.15e-42 | 25 |
pro-T cell | 9.15e-42 | 25 |
mature alpha-beta T cell | 1.14e-39 | 18 |
alpha-beta T cell | 1.14e-39 | 18 |
immature T cell | 1.14e-39 | 18 |
mature T cell | 1.14e-39 | 18 |
immature alpha-beta T cell | 1.14e-39 | 18 |
lymphoid lineage restricted progenitor cell | 3.78e-25 | 52 |
lymphocyte | 1.40e-24 | 53 |
common lymphoid progenitor | 1.40e-24 | 53 |
CD4-positive, alpha-beta T cell | 3.13e-23 | 6 |
CD8-positive, alpha-beta T cell | 1.07e-21 | 11 |
naive T cell | 4.56e-12 | 3 |
natural killer cell | 1.43e-11 | 3 |
pro-NK cell | 1.43e-11 | 3 |
nongranular leukocyte | 8.90e-10 | 115 |
regulatory T cell | 1.06e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.06e-08 | 2 |
naive regulatory T cell | 1.06e-08 | 2 |
hematopoietic lineage restricted progenitor cell | 4.07e-08 | 120 |
leukocyte | 1.47e-07 | 136 |
hematopoietic cell | 6.91e-07 | 177 |
hematopoietic stem cell | 9.42e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
blood | 7.15e-15 | 15 |
haemolymphatic fluid | 7.15e-15 | 15 |
organism substance | 7.15e-15 | 15 |
thymus | 2.29e-09 | 4 |
hemolymphoid system gland | 2.29e-09 | 4 |
thymic region | 2.29e-09 | 4 |
pharyngeal gland | 2.29e-09 | 4 |
thymus primordium | 2.29e-09 | 4 |