FFCP PHASE1:Hg19::chr21:45839939..45839955,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:45839939..45839955,- | |||
|description=CAGE_peak_at_chr21:45839939..45839955,- | |description=CAGE_peak_at_chr21:45839939..45839955,- | ||
|id=chr21:45839939..45839955,- | |id=chr21:45839939..45839955,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;9.52e-10;3!CL:0000167;1.74e-07;1!CL:0000164;1.74e-07;1!CL:0000502;1.74e-07;1!CL:0000172;1.74e-07;1!CL:0000173;1.74e-07;1!CL:0000083;4.47e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,9.14e-10,3;CL:0000066,1.53e-08,253;CL:0000167,1.15e-07,1;CL:0000164,1.15e-07,1;CL:0000502,1.15e-07,1;CL:0000172,1.15e-07,1;CL:0000173,1.15e-07,1;CL:0002351,1.15e-07,1;CL:0000083,4.91e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009847;2.09e-09;3!UBERON:0003353;2.09e-09;3!CL:0002351;1.74e-07;1 | |||
|ontology_enrichment_disease=DOID:305!4.92e-18!106;DOID:0050687!2.39e-16!143;DOID:14566!5.04e-12!239;DOID:162!1.51e-11!235 | |ontology_enrichment_disease=DOID:305!4.92e-18!106;DOID:0050687!2.39e-16!143;DOID:14566!5.04e-12!239;DOID:162!1.51e-11!235 | ||
|ontology_enrichment_disease_v019=DOID:299;5.83e-15;25!DOID:4929;2.70e-13;2!DOID:3119;2.71e-11;14!DOID:305;1.45e-08;106!DOID:1799;1.74e-07;1!DOID:10165;1.74e-07;1!DOID:1798;1.74e-07;1!DOID:4430;1.74e-07;1!DOID:0050687;4.25e-07;143!DOID:1793;4.47e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.00e-24,106;DOID:0050687,1.44e-22,143;DOID:162,1.04e-15,235;DOID:14566,2.84e-15,239;DOID:299,6.14e-15,25;DOID:4929,6.48e-13,2;DOID:3119,2.71e-11,14;DOID:4430,1.15e-07,1;DOID:1799,1.48e-07,1;DOID:10165,1.48e-07,1;DOID:1798,1.48e-07,1;DOID:0050686,2.66e-07,137;DOID:1793,4.91e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.73e-11!9;UBERON:0002114!4.82e-09!12;UBERON:0002075!1.15e-08!18;UBERON:0001041!4.34e-08!98;UBERON:0004921!7.09e-08!129;UBERON:0004185!7.09e-08!129;UBERON:0001557!1.16e-07!19;UBERON:0002108!1.52e-07!14;UBERON:0001264!1.57e-07!10;UBERON:0003922!1.57e-07!10;UBERON:0003923!1.57e-07!10;UBERON:0003924!1.57e-07!10;UBERON:0003921!1.57e-07!10;UBERON:0000077!1.80e-07!130;UBERON:0005409!1.94e-07!35 | |ontology_enrichment_uberon=UBERON:0001737!8.73e-11!9;UBERON:0002114!4.82e-09!12;UBERON:0002075!1.15e-08!18;UBERON:0001041!4.34e-08!98;UBERON:0004921!7.09e-08!129;UBERON:0004185!7.09e-08!129;UBERON:0001557!1.16e-07!19;UBERON:0002108!1.52e-07!14;UBERON:0001264!1.57e-07!10;UBERON:0003922!1.57e-07!10;UBERON:0003923!1.57e-07!10;UBERON:0003924!1.57e-07!10;UBERON:0003921!1.57e-07!10;UBERON:0000077!1.80e-07!130;UBERON:0005409!1.94e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.89e-14;2!UBERON:0002757;6.89e-14;2!UBERON:0010134;6.89e-14;2!UBERON:0005408;6.89e-14;2!UBERON:0001899;6.89e-14;2!UBERON:0004913;1.74e-07;1!UBERON:0003703;1.74e-07;1!UBERON:0001174;1.74e-07;1!UBERON:0004914;1.74e-07;1!UBERON:0003296;2.28e-07;4!UBERON:0010133;2.28e-07;4!UBERON:0002784;2.28e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.17e-14,2;UBERON:0002757,5.17e-14,2;UBERON:0010134,5.17e-14,2;UBERON:0005408,5.17e-14,2;UBERON:0001899,5.17e-14,2;UBERON:0003296,1.98e-07,4;UBERON:0010133,1.98e-07,4;UBERON:0002784,1.98e-07,4;UBERON:0004913,2.98e-07,1;UBERON:0003703,2.98e-07,1;UBERON:0001174,2.98e-07,1;UBERON:0004914,2.98e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0.128091319725675,0.260118695119756,0,0,0,0.296573126324121,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,1.01150814046861,0.723033089650446,0.882351781859152,1.08939722046203,0.474541238222193,0.539325232640658,0.784885860501384,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0.985143749731331,0,0,0.492663237895943,0.704387472105808,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,1.69291777801603,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,2.99424864653152,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,2.51932747854276,0,0,0,0,0.716084698702437,0,0,0,0,0,0,0,0,0,0,0,0,2.83665218121524,0.344743373241465,0,0,0,0,0,0,0.295547618953547,0,0.435753854075961,0.557694977114413,0.153900517007594,0,0,1.52587995496613,0,0,0,0,0,0,0,0,0.19606253431774,0.167821586975843,0,0.635746315921515,0,1.46909527343233,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0,0.664653872707185,0.330991955875499,0.627865836814451,2.38944859545918,0,0,1.73559738335131,0.489961987071888,0,0,0,1.16107597546902,2.19267951258557,0.574808199372465,0,0,0,0,0.993573058514948,0.126621591911757,5.67099009930929,0.881747022766871,0,4.79543062997113,2.59362750877391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0.0671834724867263,0,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.35857467866569,0,0,0,0,0,0,0,0,0.246277562248017,0,0.339936274560377,0,0,0.129282956361551,0,0.342173675768659,0,0,0,0,0,1.18566979138767,0,0.638341257770182,0,0,0,0,0.942324577501406,0,0,0.1251909307065,0,0,0,0,0,1.36484205787483,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.733714394086716,0.231051332300676,0,0,0.198916222116275,0.0752103283492573,0,0,1.57144016688853,0,1.03499260351932,0,0,0,0.0634158101939068,0,0,0,0,0.383287282918786,1.60710550763486,9.75222794434589,0,0,0,0,0,0,0.0657727735628491,1.18193840883968,2.22462803784138,0.078493092850514,0,1.68163297988273,0,0,0,0,0.632054446930906,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,1.3746412112643,0.93061915699296,0,0,0.588901401691458,0,0,0,0,0,1.63757624423474,0,0.594600453887843,0.22589216407792,0,6.03851374266694,0,0,3.29222107453066,0,1.64973582971138,0,0.297046400327086,0,0,0.187967835959707,0.0644578879735772,0,1.60698544745092,0,0,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,1.51399709802095,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,1.16772762738563,0,0.244482888365733,0,0,0,0 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| ||
|short_description=p@chr21:45839939..45839955,- | |short_description=p@chr21:45839939..45839955,- | ||
}} | }} |
Latest revision as of 18:29, 28 July 2015
Short description: | p@chr21:45839939..45839955, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:45839939..45839955, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 9.14e-10 | 3 |
epithelial cell | 1.53e-08 | 253 |
peptide hormone secreting cell | 1.15e-07 | 1 |
enteroendocrine cell | 1.15e-07 | 1 |
type D enteroendocrine cell | 1.15e-07 | 1 |
somatostatin secreting cell | 1.15e-07 | 1 |
pancreatic D cell | 1.15e-07 | 1 |
progenitor cell of endocrine pancreas | 1.15e-07 | 1 |
epithelial cell of pancreas | 4.91e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pineal body | 5.17e-14 | 2 |
regional part of epithalamus | 5.17e-14 | 2 |
secretory circumventricular organ | 5.17e-14 | 2 |
circumventricular organ | 5.17e-14 | 2 |
epithalamus | 5.17e-14 | 2 |
gland of diencephalon | 1.98e-07 | 4 |
neuroendocrine gland | 1.98e-07 | 4 |
regional part of diencephalon | 1.98e-07 | 4 |
hepatopancreatic ampulla | 2.98e-07 | 1 |
extrahepatic bile duct | 2.98e-07 | 1 |
common bile duct | 2.98e-07 | 1 |
duodenal papilla | 2.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.00e-24 | 106 |
cell type cancer | 1.44e-22 | 143 |
cancer | 1.04e-15 | 235 |
disease of cellular proliferation | 2.84e-15 | 239 |
adenocarcinoma | 6.14e-15 | 25 |
tubular adenocarcinoma | 6.48e-13 | 2 |
gastrointestinal system cancer | 2.71e-11 | 14 |
somatostatinoma | 1.15e-07 | 1 |
islet cell tumor | 1.48e-07 | 1 |
endocrine pancreas cancer | 1.48e-07 | 1 |
pancreatic endocrine carcinoma | 1.48e-07 | 1 |
organ system cancer | 2.66e-07 | 137 |
pancreatic cancer | 4.91e-07 | 4 |