FFCP PHASE1:Hg19::chr2:179459301..179459312,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:179459301..179459312,- | |||
|coexpression_cluster_id=C410 | |coexpression_cluster_id=C410 | ||
|description=CAGE_peak_at_chr2:179459301..179459312,- | |description=CAGE_peak_at_chr2:179459301..179459312,- | ||
|id=chr2:179459301..179459312,- | |id=chr2:179459301..179459312,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.15e-26;1!UBERON:0010226;3.15e-26;1!UBERON:0008814;1.21e-13;2!UBERON:0010056;1.21e-13;2!UBERON:0005062;1.80e-07;4!UBERON:0007284;1.80e-07;4 | |||
|ontology_enrichment_disease=DOID:114!3.16e-18!2;DOID:178!8.24e-10!1;DOID:326!8.24e-10!1;DOID:3978!8.24e-10!1;DOID:3394!8.24e-10!1;DOID:5844!8.24e-10!1;DOID:1287!1.39e-09!4 | |ontology_enrichment_disease=DOID:114!3.16e-18!2;DOID:178!8.24e-10!1;DOID:326!8.24e-10!1;DOID:3978!8.24e-10!1;DOID:3394!8.24e-10!1;DOID:5844!8.24e-10!1;DOID:1287!1.39e-09!4 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!8.28e-20!27;UBERON:0007023!9.15e-17!115;UBERON:0003103!1.34e-13!69;UBERON:0004151!4.34e-13!3;UBERON:0001723!6.58e-13!3;UBERON:0001033!6.58e-13!3;UBERON:0010056!6.58e-13!3;UBERON:0003978!1.05e-12!3;UBERON:0009751!1.05e-12!3;UBERON:0000946!1.05e-12!3;UBERON:0002523!1.05e-12!3;UBERON:0005983!1.05e-12!3;UBERON:0002165!1.05e-12!3;UBERON:0002062!1.05e-12!3;UBERON:0007280!1.05e-12!3;UBERON:0002084!1.80e-10!1;UBERON:0002082!1.80e-10!1;UBERON:0004706!1.80e-10!1;UBERON:0002079!1.98e-10!1;UBERON:0002135!2.59e-10!1;UBERON:0000989!3.40e-10!1;UBERON:0008811!3.40e-10!1;UBERON:0006258!3.40e-10!1;UBERON:0005876!3.40e-10!1;UBERON:0004874!3.40e-10!1;UBERON:0002426!4.06e-10!1;UBERON:0003831!4.06e-10!1;UBERON:0003898!4.06e-10!1;UBERON:0004830!4.06e-10!1;UBERON:0001774!4.06e-10!1;UBERON:0003830!4.06e-10!1;UBERON:0005175!4.06e-10!1;UBERON:0003897!4.06e-10!1;UBERON:0001103!4.06e-10!1;UBERON:0010084!4.06e-10!1;UBERON:0002146!5.30e-10!1;UBERON:0005623!5.30e-10!1;UBERON:0001301!9.82e-10!1;UBERON:0000948!4.39e-09!24;UBERON:0005498!4.39e-09!24;UBERON:0004140!4.39e-09!24;UBERON:0009881!4.39e-09!24;UBERON:0004141!4.39e-09!24;UBERON:0003084!4.39e-09!24;UBERON:0007005!4.39e-09!24;UBERON:0004139!4.39e-09!24;UBERON:0004291!4.39e-09!24 | |ontology_enrichment_uberon=UBERON:0007100!8.28e-20!27;UBERON:0007023!9.15e-17!115;UBERON:0003103!1.34e-13!69;UBERON:0004151!4.34e-13!3;UBERON:0001723!6.58e-13!3;UBERON:0001033!6.58e-13!3;UBERON:0010056!6.58e-13!3;UBERON:0003978!1.05e-12!3;UBERON:0009751!1.05e-12!3;UBERON:0000946!1.05e-12!3;UBERON:0002523!1.05e-12!3;UBERON:0005983!1.05e-12!3;UBERON:0002165!1.05e-12!3;UBERON:0002062!1.05e-12!3;UBERON:0007280!1.05e-12!3;UBERON:0002084!1.80e-10!1;UBERON:0002082!1.80e-10!1;UBERON:0004706!1.80e-10!1;UBERON:0002079!1.98e-10!1;UBERON:0002135!2.59e-10!1;UBERON:0000989!3.40e-10!1;UBERON:0008811!3.40e-10!1;UBERON:0006258!3.40e-10!1;UBERON:0005876!3.40e-10!1;UBERON:0004874!3.40e-10!1;UBERON:0002426!4.06e-10!1;UBERON:0003831!4.06e-10!1;UBERON:0003898!4.06e-10!1;UBERON:0004830!4.06e-10!1;UBERON:0001774!4.06e-10!1;UBERON:0003830!4.06e-10!1;UBERON:0005175!4.06e-10!1;UBERON:0003897!4.06e-10!1;UBERON:0001103!4.06e-10!1;UBERON:0010084!4.06e-10!1;UBERON:0002146!5.30e-10!1;UBERON:0005623!5.30e-10!1;UBERON:0001301!9.82e-10!1;UBERON:0000948!4.39e-09!24;UBERON:0005498!4.39e-09!24;UBERON:0004140!4.39e-09!24;UBERON:0009881!4.39e-09!24;UBERON:0004141!4.39e-09!24;UBERON:0003084!4.39e-09!24;UBERON:0007005!4.39e-09!24;UBERON:0004139!4.39e-09!24;UBERON:0004291!4.39e-09!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;3.93e-34;3!UBERON:0001723;1.27e-33;3!UBERON:0001033;1.27e-33;3!UBERON:0002084;3.15e-26;1!UBERON:0002079;3.15e-26;1!UBERON:0002082;3.15e-26;1!UBERON:0002135;7.62e-26;1!UBERON:0007100;2.58e-16;25!UBERON:0002081;7.77e-14;2!UBERON:0000341;1.21e-13;2!UBERON:0002133;1.21e-13;2!UBERON:0000948;7.16e-11;22!UBERON:0003978;1.53e-09;3!UBERON:0000946;1.53e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,3.94e-34,3;UBERON:0001723,1.27e-33,3;UBERON:0001033,1.27e-33,3;UBERON:0010056,1.27e-33,3;UBERON:0002084,2.78e-26,1;UBERON:0002082,2.78e-26,1;UBERON:0010226,2.78e-26,1;UBERON:0002079,3.58e-26,1;UBERON:0002135,7.62e-26,1;UBERON:0007100,3.68e-15,27;UBERON:0002081,8.28e-14,2;UBERON:0010227,8.28e-14,2;UBERON:0002133,1.21e-13,2;UBERON:0000341,1.37e-13,2;UBERON:0003103,3.21e-13,68;UBERON:0001042,7.67e-11,10;UBERON:0009145,7.67e-11,10;UBERON:0007023,1.08e-10,114;UBERON:0000948,5.07e-10,24;UBERON:0005498,5.07e-10,24;UBERON:0004140,5.07e-10,24;UBERON:0009881,5.07e-10,24;UBERON:0004141,5.07e-10,24;UBERON:0003084,5.07e-10,24;UBERON:0007005,5.07e-10,24;UBERON:0004139,5.07e-10,24;UBERON:0004291,5.07e-10,24;UBERON:0006562,6.06e-10,11;UBERON:0003978,1.54e-09,3;UBERON:0009751,1.54e-09,3;UBERON:0000946,1.54e-09,3;UBERON:0002523,1.54e-09,3;UBERON:0005983,1.54e-09,3;UBERON:0002165,1.54e-09,3;UBERON:0002062,1.54e-09,3;UBERON:0007280,1.54e-09,3 | |||
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|short_description=p@chr2:179459301..179459312,- | |short_description=p@chr2:179459301..179459312,- | ||
}} | }} |
Latest revision as of 03:21, 29 July 2015
Short description: | p@chr2:179459301..179459312, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:179459301..179459312, - |
Coexpression cluster: | C410_skeletal_left_heart_penis_diaphragm_throat_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 3.94e-34 | 3 |
tongue | 1.27e-33 | 3 |
gustatory system | 1.27e-33 | 3 |
future tongue | 1.27e-33 | 3 |
heart left ventricle | 2.78e-26 | 1 |
cardiac ventricle | 2.78e-26 | 1 |
future cardiac ventricle | 2.78e-26 | 1 |
left cardiac atrium | 3.58e-26 | 1 |
mitral valve | 7.62e-26 | 1 |
primary circulatory organ | 3.68e-15 | 27 |
cardiac atrium | 8.28e-14 | 2 |
future cardiac atrium | 8.28e-14 | 2 |
atrioventricular valve | 1.21e-13 | 2 |
throat | 1.37e-13 | 2 |
compound organ | 3.21e-13 | 68 |
chordate pharynx | 7.67e-11 | 10 |
pharyngeal region of foregut | 7.67e-11 | 10 |
adult organism | 1.08e-10 | 114 |
heart | 5.07e-10 | 24 |
primitive heart tube | 5.07e-10 | 24 |
primary heart field | 5.07e-10 | 24 |
anterior lateral plate mesoderm | 5.07e-10 | 24 |
heart tube | 5.07e-10 | 24 |
heart primordium | 5.07e-10 | 24 |
cardiac mesoderm | 5.07e-10 | 24 |
cardiogenic plate | 5.07e-10 | 24 |
heart rudiment | 5.07e-10 | 24 |
pharynx | 6.06e-10 | 11 |
valve | 1.54e-09 | 3 |
cardiac mesenchyme | 1.54e-09 | 3 |
cardial valve | 1.54e-09 | 3 |
tunica intima | 1.54e-09 | 3 |
heart layer | 1.54e-09 | 3 |
endocardium | 1.54e-09 | 3 |
endocardial cushion | 1.54e-09 | 3 |
presumptive endocardium | 1.54e-09 | 3 |