FFCP PHASE1:Hg19::chr2:240195237..240195254,-: Difference between revisions
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|id=chr2:240195237..240195254,-
|short_description=p@chr2:240195237..240195254,-
|description=CAGE_peak_at_chr2:240195237..240195254,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:240195237..240195254,- | |||
|description=CAGE_peak_at_chr2:240195237..240195254,- | |||
|id=chr2:240195237..240195254,- | |||
|ontology_enrichment_celltype=CL:0002057!5.36e-46!42;CL:0000860!1.35e-42!45;CL:0002009!2.75e-30!65;CL:0000557!3.56e-30!71;CL:0002194!1.83e-28!63;CL:0000576!1.83e-28!63;CL:0000040!1.83e-28!63;CL:0000559!1.83e-28!63;CL:0000766!8.98e-28!76;CL:0000763!5.58e-27!112;CL:0000049!5.58e-27!112;CL:0000839!3.64e-25!70;CL:0002032!2.95e-19!165;CL:0000837!2.95e-19!165;CL:0000037!3.32e-18!172;CL:0000566!3.32e-18!172;CL:0000738!5.54e-17!140;CL:0000988!7.63e-17!182;CL:0002031!1.48e-16!124;CL:0002087!7.44e-16!119;CL:0000767!4.21e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.48e-26;33!CL:0002057;2.48e-26;33!CL:0002032;6.31e-21;1!CL:0000557;6.31e-21;1!CL:0000473;9.69e-18;39!CL:0000234;9.69e-18;39!CL:0000576;3.39e-17;48!CL:0002178;7.26e-08;3!CL:0000766;1.32e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.28e-23,42;CL:0002057,6.28e-23,42;CL:0000473,4.75e-20,48;CL:0000234,4.75e-20,48;CL:0000557,2.62e-18,67;CL:0002194,5.20e-16,59;CL:0000576,5.20e-16,59;CL:0000040,5.20e-16,59;CL:0000559,5.20e-16,59;CL:0002009,1.73e-15,61;CL:0000839,2.56e-14,66;CL:0000766,4.00e-13,72;CL:0000763,2.67e-11,108;CL:0000049,2.67e-11,108;CL:0002087,3.72e-08,115;CL:0002178,7.76e-08,3;CL:0002031,8.34e-08,120;CL:0002032,1.85e-07,161;CL:0000837,1.85e-07,161;CL:0000037,3.96e-07,168;CL:0000738,7.49e-07,136;CL:0000988,9.63e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.86e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;3.70e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.09e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!3.23e-26!80;UBERON:0001474!4.91e-24!86;UBERON:0002390!2.15e-23!102;UBERON:0003061!2.15e-23!102;UBERON:0002193!8.26e-21!112;UBERON:0004765!1.05e-19!101;UBERON:0001434!1.05e-19!101;UBERON:0002405!2.46e-18!115;UBERON:0002204!6.82e-10!167;UBERON:0003081!3.95e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.89e-16,76;UBERON:0001474,6.01e-15,82;UBERON:0004765,1.32e-13,90;UBERON:0002405,3.68e-13,93;UBERON:0002390,1.77e-12,98;UBERON:0003061,1.77e-12,98;UBERON:0001434,3.18e-12,100;UBERON:0002193,2.67e-11,108;UBERON:0002204,3.56e-07,167 | |||
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|short_description=p@chr2:240195237..240195254,- | |||
}} | }} |
Latest revision as of 08:23, 29 July 2015
Short description: | p@chr2:240195237..240195254, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:240195237..240195254, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.28e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.28e-23 | 42 |
defensive cell | 4.75e-20 | 48 |
phagocyte | 4.75e-20 | 48 |
granulocyte monocyte progenitor cell | 2.62e-18 | 67 |
monopoietic cell | 5.20e-16 | 59 |
monocyte | 5.20e-16 | 59 |
monoblast | 5.20e-16 | 59 |
promonocyte | 5.20e-16 | 59 |
macrophage dendritic cell progenitor | 1.73e-15 | 61 |
myeloid lineage restricted progenitor cell | 2.56e-14 | 66 |
myeloid leukocyte | 4.00e-13 | 72 |
myeloid cell | 2.67e-11 | 108 |
common myeloid progenitor | 2.67e-11 | 108 |
nongranular leukocyte | 3.72e-08 | 115 |
epithelial cell of stomach | 7.76e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 8.34e-08 | 120 |
hematopoietic oligopotent progenitor cell | 1.85e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-07 | 161 |
hematopoietic stem cell | 3.96e-07 | 168 |
leukocyte | 7.49e-07 | 136 |
hematopoietic cell | 9.63e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.89e-16 | 76 |
bone element | 6.01e-15 | 82 |
skeletal element | 1.32e-13 | 90 |
immune system | 3.68e-13 | 93 |
hematopoietic system | 1.77e-12 | 98 |
blood island | 1.77e-12 | 98 |
skeletal system | 3.18e-12 | 100 |
hemolymphoid system | 2.67e-11 | 108 |
musculoskeletal system | 3.56e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.09e-11 | 2 |