FFCP PHASE1:Hg19::chr2:8851401..8851408,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:8851401..8851408,+ | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_at_chr2:8851401..8851408,+ | |description=CAGE_peak_at_chr2:8851401..8851408,+ | ||
|id=chr2:8851401..8851408,+ | |id=chr2:8851401..8851408,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!1.66e-74!3;UBERON:0005290!1.66e-74!3;UBERON:0010096!1.66e-74!3;UBERON:0003076!2.31e-41!15;UBERON:0003057!2.31e-41!15;UBERON:0002240!7.70e-34!3;UBERON:0002298!1.49e-28!8;UBERON:0002336!9.79e-26!1;UBERON:0001018!9.79e-26!1;UBERON:0002473!9.79e-26!1;UBERON:0005340!9.79e-26!1;UBERON:0002316!9.79e-26!1;UBERON:0003544!9.79e-26!1;UBERON:0001020!9.79e-26!1;UBERON:0005970!9.79e-26!1;UBERON:0002437!9.79e-26!1;UBERON:0001049!6.33e-21!57;UBERON:0005068!6.33e-21!57;UBERON:0006241!6.33e-21!57;UBERON:0007135!6.33e-21!57;UBERON:0005174!8.98e-21!5;UBERON:0001137!8.98e-21!5;UBERON:0004733!2.56e-19!12;UBERON:0002028!2.56e-19!12;UBERON:0007277!2.56e-19!12;UBERON:0001017!7.53e-19!82;UBERON:0003075!3.34e-18!86;UBERON:0007284!3.34e-18!86;UBERON:0005743!5.37e-18!86;UBERON:0004732!6.81e-18!13;UBERON:0002346!2.09e-17!90;UBERON:0000073!2.48e-16!94;UBERON:0001016!2.48e-16!94;UBERON:0007023!8.82e-14!115;UBERON:0001954!9.40e-14!2;UBERON:0003022!9.40e-14!2;UBERON:0002421!9.40e-14!2;UBERON:0002600!9.40e-14!2;UBERON:0002360!1.07e-13!2;UBERON:0000094!1.07e-13!2;UBERON:0007645!1.07e-13!2;UBERON:0005162!1.37e-13!2;UBERON:0000122!1.37e-13!2;UBERON:0002616!1.39e-10!59;UBERON:0004121!3.38e-09!169;UBERON:0000924!5.50e-09!173;UBERON:0006601!5.50e-09!173;UBERON:0000955!5.64e-09!69;UBERON:0006238!5.64e-09!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;8.98e-131;3!UBERON:0005290;8.98e-131;3!UBERON:0002298;2.83e-66;6!UBERON:0004733;5.98e-34;12!UBERON:0002028;5.98e-34;12!UBERON:0004732;1.86e-31;13!UBERON:0000073;8.54e-09;53!UBERON:0002616;8.54e-09;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,8.98e-131,3;UBERON:0005290,8.98e-131,3;UBERON:0010096,8.98e-131,3;UBERON:0002298,2.83e-66,6;UBERON:0004733,5.98e-34,12;UBERON:0002028,5.98e-34,12;UBERON:0007277,5.98e-34,12;UBERON:0004732,1.86e-31,13;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p@chr2:8851401..8851408,+ | |short_description=p@chr2:8851401..8851408,+ | ||
}} | }} |
Latest revision as of 13:01, 29 July 2015
Short description: | p@chr2:8851401..8851408, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:8851401..8851408, + |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 8.98e-131 | 3 |
myelencephalon | 8.98e-131 | 3 |
future myelencephalon | 8.98e-131 | 3 |
brainstem | 2.83e-66 | 6 |
segmental subdivision of hindbrain | 5.98e-34 | 12 |
hindbrain | 5.98e-34 | 12 |
presumptive hindbrain | 5.98e-34 | 12 |
segmental subdivision of nervous system | 1.86e-31 | 13 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |