FFCP PHASE1:Hg19::chr3:113933201..113933211,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_ENST00000493033,uc003ebe.1_5end | |||
|cluster_id=chr3:113933201..113933211,+ | |||
|coexpression_cluster_id=C4268 | |||
|description=CAGE_peak_3_at_ENST00000493033_5end,CAGE_peak_3_at_uc003ebe.1_5end | |||
|id=chr3:113933201..113933211,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.04e-46!53;CL:0000051!3.04e-46!53;CL:0000838!6.88e-45!52;CL:0000738!9.38e-34!140;CL:0000084!9.78e-33!25;CL:0000827!9.78e-33!25;CL:0000791!1.01e-32!18;CL:0000789!1.01e-32!18;CL:0002420!1.01e-32!18;CL:0002419!1.01e-32!18;CL:0000790!1.01e-32!18;CL:0002087!9.05e-30!119;CL:0000988!1.15e-28!182;CL:0000037!1.44e-27!172;CL:0000566!1.44e-27!172;CL:0002031!6.68e-27!124;CL:0002032!5.48e-26!165;CL:0000837!5.48e-26!165;CL:0000625!4.06e-21!11;CL:0000624!1.22e-11!6;CL:0000080!7.35e-11!6;CL:0000945!9.01e-11!24;CL:0000826!9.01e-11!24;CL:0000236!5.40e-09!14;CL:0000134!3.45e-08!358;CL:0002320!1.03e-07!365;CL:0000623!2.12e-07!3;CL:0000825!2.12e-07!3;CL:0000767!9.48e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.42e-40;18!CL:0000789;4.42e-40;18!CL:0002419;4.42e-40;18!CL:0000625;5.32e-30;11!CL:0000084;3.49e-28;25!CL:0000623;4.42e-17;3!CL:0000624;2.98e-14;6!CL:0000542;3.71e-13;53!CL:0000815;1.05e-11;2!CL:0000792;1.05e-11;2!CL:0002677;1.05e-11;2!CL:0000898;4.39e-08;3!CL:0000081;6.64e-08;11!CL:0000767;7.71e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.18e-40,18;CL:0000789,2.18e-40,18;CL:0002420,2.18e-40,18;CL:0002419,2.18e-40,18;CL:0000790,2.18e-40,18;CL:0000625,5.07e-30,11;CL:0000084,2.11e-28,25;CL:0000827,2.11e-28,25;CL:0000838,5.57e-26,52;CL:0000542,2.03e-25,53;CL:0000051,2.03e-25,53;CL:0000623,1.96e-17,3;CL:0000825,1.96e-17,3;CL:0000624,1.54e-14,6;CL:0000738,1.85e-12,136;CL:0000815,5.22e-12,2;CL:0000792,5.22e-12,2;CL:0002677,5.22e-12,2;CL:0000988,8.80e-11,177;CL:0002031,2.38e-10,120;CL:0002032,7.70e-10,161;CL:0000837,7.70e-10,161;CL:0002087,1.32e-09,115;CL:0000037,3.01e-09,168;CL:0000898,2.76e-08,3;CL:0000081,7.30e-08,11;CL:0000767,8.28e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;4.42e-40;18!CL:0000051;3.71e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.01e-13!15;UBERON:0000179!4.01e-13!15;UBERON:0000463!4.01e-13!15;UBERON:0002390!9.84e-09!102;UBERON:0003061!9.84e-09!102;UBERON:0002193!1.24e-08!112;UBERON:0004177!1.24e-07!7;UBERON:0002384!4.46e-07!375;UBERON:0002370!9.80e-07!4;UBERON:0005058!9.80e-07!4;UBERON:0009113!9.80e-07!4;UBERON:0003295!9.80e-07!4;UBERON:0005562!9.80e-07!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,1.18009283054671,1.53531759238885,0.928896739896456,0,0,0,0,0.426507697462265,0,0.553995408531877,0.601633342410425,0.651032612147555,0,0.32389366601898,0.515151135268373,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0.612167784741805,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0.800791974072025,0,1.32208974556972,0.954053754535364,1.1384259382189,0,0.382273228125229,0,2.24203425192614,0,1.37696839079683,0.393010762749165,1.64481199199607,0.501559486172034,1.95553359980154,3.31413464014313,3.89653456815823,2.33961959458865,2.65145316727353,2.43687284041983,3.79125409271022,0.25618263945135,0.390178042679635,1.64437904603676,1.10540007114339,1.73881851441031,0.444859689486181,1.60524496853828,0,1.13309342697566,0.383220493601921,1.03088233644789,1.01207876807801,0.95569624297229,3.25541726928209,0.950452044448374,0.903450714466637,1.02389288923535,2.49861453104692,2.13099526839615,2.46338399076314,1.81446068902259,1.60464117470104,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.264818361626438,0,0,0,0,0,0.622422070799533,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65862492432618,0.576479813667846,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.784596007954691,1.97030760201927,2.80315847317372,5.13372145118993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,0.476463550915578,0.822724546172388,0,0,0,0,0,0,0.371606350251437,0.28853842595289,0,0,0.997896857164083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0,0.552567831062295,0,0.102268682502155,0,0.311039587661807,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.627921025580099,0,0,0,0,0,0,0,0,0,0,0,0,0,8.30259160305741,0.370691816839509,1.35748534357092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.533937062838473,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0,0,0,0,0.310874401165561,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,1.18009283054671,1.53531759238885,0.928896739896456,0,0,0,0,0.426507697462265,0,0.553995408531877,0.601633342410425,0.651032612147555,0,0.32389366601898,0.515151135268373,0,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0.612167784741805,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0.800791974072025,0,1.32208974556972,0.954053754535364,1.1384259382189,0,0.382273228125229,0,2.24203425192614,0,1.37696839079683,0.393010762749165,1.64481199199607,0.501559486172034,1.95553359980154,3.31413464014313,3.89653456815823,2.33961959458865,2.65145316727353,2.43687284041983,3.79125409271022,0.25618263945135,0.390178042679635,1.64437904603676,1.10540007114339,1.73881851441031,0.444859689486181,1.60524496853828,0,1.13309342697566,0.383220493601921,1.03088233644789,1.01207876807801,0.95569624297229,3.25541726928209,0.950452044448374,0.903450714466637,1.02389288923535,2.49861453104692,2.13099526839615,2.46338399076314,1.81446068902259,1.60464117470104,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.264818361626438,0,0,0,0,0,0.622422070799533,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65862492432618,0.576479813667846,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.784596007954691,1.97030760201927,2.80315847317372,5.13372145118993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,0.476463550915578,0.822724546172388,0,0,0,0,0,0,0.371606350251437,0.28853842595289,0,0,0.997896857164083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0,0.552567831062295,0,0.102268682502155,0,0.311039587661807,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.627921025580099,0,0,0,0,0,0,0,0,0,0,0,0,0,8.30259160305741,0.370691816839509,1.35748534357092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.533937062838473,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0,0,0,0,0.310874401165561,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p3@ENST00000493033,p3@uc003ebe.1 | |||
}} | }} |
Latest revision as of 14:30, 29 July 2015
Short description: | p3@ENST00000493033, p3@uc003ebe.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000493033_5end, CAGE_peak_3_at_uc003ebe.1_5end |
Coexpression cluster: | C4268_Natural_CD4_cord_CD8_Basophils_CD14_CD34 |
Association with transcript: | -26bp_to_ENST00000493033, uc003ebe.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.18e-40 | 18 |
alpha-beta T cell | 2.18e-40 | 18 |
immature T cell | 2.18e-40 | 18 |
mature T cell | 2.18e-40 | 18 |
immature alpha-beta T cell | 2.18e-40 | 18 |
CD8-positive, alpha-beta T cell | 5.07e-30 | 11 |
T cell | 2.11e-28 | 25 |
pro-T cell | 2.11e-28 | 25 |
lymphoid lineage restricted progenitor cell | 5.57e-26 | 52 |
lymphocyte | 2.03e-25 | 53 |
common lymphoid progenitor | 2.03e-25 | 53 |
natural killer cell | 1.96e-17 | 3 |
pro-NK cell | 1.96e-17 | 3 |
CD4-positive, alpha-beta T cell | 1.54e-14 | 6 |
leukocyte | 1.85e-12 | 136 |
regulatory T cell | 5.22e-12 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.22e-12 | 2 |
naive regulatory T cell | 5.22e-12 | 2 |
hematopoietic cell | 8.80e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 2.38e-10 | 120 |
hematopoietic oligopotent progenitor cell | 7.70e-10 | 161 |
hematopoietic multipotent progenitor cell | 7.70e-10 | 161 |
nongranular leukocyte | 1.32e-09 | 115 |
hematopoietic stem cell | 3.01e-09 | 168 |
naive T cell | 2.76e-08 | 3 |
blood cell | 7.30e-08 | 11 |
basophil | 8.28e-08 | 3 |