FFCP PHASE1:Hg19::chr3:147115400..147115411,+: Difference between revisions
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|id=chr3:147115400..147115411,+
|short_description=p@chr3:147115400..147115411,+
|description=CAGE_peak_at_chr3:147115400..147115411,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:147115400..147115411,+ | |||
|coexpression_cluster_id=C711 | |||
|description=CAGE_peak_at_chr3:147115400..147115411,+ | |||
|id=chr3:147115400..147115411,+ | |||
|ontology_enrichment_celltype=CL:0002603!2.10e-12!3;CL:0000064!4.11e-12!3;CL:0005012!4.11e-12!3;CL:0000067!4.11e-12!3;CL:0002304!4.11e-12!3;CL:0000708!7.13e-12!3;CL:0002590!1.83e-11!3;CL:0002559!1.95e-09!4;CL:0002575!1.24e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002603;9.27e-50;3!CL:0000346;6.43e-23;3!CL:1000428;6.43e-23;3!CL:0000128;8.41e-22;7!CL:0000126;8.41e-22;7!CL:0000127;8.41e-22;7!CL:0002559;3.59e-14;5!CL:0002575;1.38e-09;2!CL:0000243;2.32e-09;15!CL:0000125;2.32e-09;15!CL:0000095;1.96e-08;17!CL:0000064;8.38e-07;3!CL:0000067;8.38e-07;3!CL:0005012;8.38e-07;3!CL:0002304;8.38e-07;3!CL:0000708;8.38e-07;3!CL:0002590;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,2.33e-49,3;CL:0000346,4.61e-23,3;CL:1000428,4.61e-23,3;CL:0000128,1.25e-21,7;CL:0000126,1.25e-21,7;CL:0000127,1.25e-21,7;CL:0002453,1.25e-21,7;CL:0002559,2.95e-14,5;CL:0000333,1.27e-09,41;CL:0000133,1.55e-09,59;CL:0002575,1.71e-09,2;CL:0000243,2.72e-09,15;CL:0000125,2.72e-09,15;CL:0000030,2.72e-09,15;CL:0000339,2.72e-09,15;CL:0000095,2.25e-08,17;CL:0000123,2.25e-08,17;CL:0000221,8.09e-08,72;CL:0000708,6.88e-07,3;CL:0000064,8.15e-07,3;CL:0000067,8.15e-07,3;CL:0005012,8.15e-07,3;CL:0002304,8.15e-07,3;CL:0002590,8.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.23e-50;3!CL:0000339;2.32e-09;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;1.32e-98;6!UBERON:0002680;8.30e-66;9!UBERON:0001895;8.30e-66;9!UBERON:0004733;2.17e-49;12!UBERON:0002028;2.17e-49;12!UBERON:0004732;1.34e-45;13!UBERON:0000412;6.43e-23;3!UBERON:0001992;6.43e-23;3!UBERON:0002073;3.59e-14;5!UBERON:0002067;2.75e-08;9!UBERON:0006876;6.16e-07;11!UBERON:0003210;8.38e-07;3!UBERON:0001778;8.38e-07;3!UBERON:0001775;8.38e-07;3 | |||
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| ||
|short_description=p@chr3:147115400..147115411,+ | |||
}} | }} |
Latest revision as of 16:43, 29 July 2015
Short description: | p@chr3:147115400..147115411, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:147115400..147115411, + |
Coexpression cluster: | C711_cerebellum_Pericytes_Fibroblast_Meningeal_spinal_Astrocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 2.33e-49 | 3 |
hair follicle dermal papilla cell | 4.61e-23 | 3 |
stem cell of epidermis | 4.61e-23 | 3 |
oligodendrocyte | 1.25e-21 | 7 |
macroglial cell | 1.25e-21 | 7 |
astrocyte | 1.25e-21 | 7 |
oligodendrocyte precursor cell | 1.25e-21 | 7 |
hair follicle cell | 2.95e-14 | 5 |
migratory neural crest cell | 1.27e-09 | 41 |
neurectodermal cell | 1.55e-09 | 59 |
central nervous system pericyte | 1.71e-09 | 2 |
glial cell (sensu Vertebrata) | 2.72e-09 | 15 |
glial cell | 2.72e-09 | 15 |
glioblast | 2.72e-09 | 15 |
glioblast (sensu Vertebrata) | 2.72e-09 | 15 |
neuron associated cell | 2.25e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 2.25e-08 | 17 |
ectodermal cell | 8.09e-08 | 72 |
leptomeningeal cell | 6.88e-07 | 3 |
ciliated cell | 8.15e-07 | 3 |
ciliated epithelial cell | 8.15e-07 | 3 |
multi-ciliated epithelial cell | 8.15e-07 | 3 |
non-pigmented ciliary epithelial cell | 8.15e-07 | 3 |
smooth muscle cell of the brain vasculature | 8.62e-07 | 3 |