FFCP PHASE1:Hg19::chr3:147128031..147128038,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=131bp_to_AB464362_5end | |association_with_transcript=131bp_to_AB464362_5end | ||
|cluster_id=chr3:147128031..147128038,+ | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_7_at_AB464362_5end | |description=CAGE_peak_7_at_AB464362_5end | ||
|id=chr3:147128031..147128038,+ | |id=chr3:147128031..147128038,+ | ||
|ontology_enrichment_celltype=CL:0000708!4.29e-18!3;CL:0000064!1.03e-17!3;CL:0005012!1.03e-17!3;CL:0000067!1.03e-17!3;CL:0002304!1.03e-17!3;CL:0002575!9.52e-14!2;CL:0000346!2.41e-09!3;CL:1000428!2.41e-09!3;CL:0002590!3.92e-09!3;CL:0002559!3.31e-07!4;CL:0000327!8.28e-07!14 | |ontology_enrichment_celltype=CL:0000708!4.29e-18!3;CL:0000064!1.03e-17!3;CL:0005012!1.03e-17!3;CL:0000067!1.03e-17!3;CL:0002304!1.03e-17!3;CL:0002575!9.52e-14!2;CL:0000346!2.41e-09!3;CL:1000428!2.41e-09!3;CL:0002590!3.92e-09!3;CL:0002559!3.31e-07!4;CL:0000327!8.28e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002575;8.81e-51;2!CL:0000346;1.07e-33;3!CL:1000428;1.07e-33;3!CL:0000669;5.23e-26;4!CL:0002559;1.10e-20;5!CL:0002590;1.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,8.82e-51,2;CL:0000346,7.70e-34,3;CL:1000428,7.70e-34,3;CL:0000669,5.23e-26,4;CL:0002559,8.98e-21,5;CL:0002590,1.41e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.07e-33;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!1.36e-21!59;UBERON:0002200!1.01e-18!11;UBERON:0006876!1.01e-18!11;UBERON:0003210!4.29e-18!3;UBERON:0000955!9.86e-18!69;UBERON:0006238!9.86e-18!69;UBERON:0001778!1.03e-17!3;UBERON:0001775!1.03e-17!3;UBERON:0004733!2.07e-17!12;UBERON:0002028!2.07e-17!12;UBERON:0007277!2.07e-17!12;UBERON:0001017!1.41e-16!82;UBERON:0002037!1.49e-16!6;UBERON:0006215!1.49e-16!6;UBERON:0002680!1.50e-16!9;UBERON:0001895!1.50e-16!9;UBERON:0010092!1.50e-16!9;UBERON:0004732!4.95e-16!13;UBERON:0003075!1.06e-15!86;UBERON:0007284!1.06e-15!86;UBERON:0005743!1.16e-15!86;UBERON:0002346!7.38e-15!90;UBERON:0000033!1.81e-14!123;UBERON:0001049!2.45e-14!57;UBERON:0005068!2.45e-14!57;UBERON:0006241!2.45e-14!57;UBERON:0007135!2.45e-14!57;UBERON:0000073!6.98e-14!94;UBERON:0001016!6.98e-14!94;UBERON:0003076!8.00e-14!15;UBERON:0003057!8.00e-14!15;UBERON:0000153!1.29e-13!129;UBERON:0007811!1.29e-13!129;UBERON:0000488!1.98e-13!4;UBERON:0004121!2.45e-13!169;UBERON:0000924!6.31e-13!173;UBERON:0006601!6.31e-13!173;UBERON:0005284!1.73e-11!5;UBERON:0000412!2.41e-09!3;UBERON:0001992!2.41e-09!3;UBERON:0003056!3.59e-09!61;UBERON:0002203!4.00e-09!6;UBERON:0001768!4.00e-09!6;UBERON:0007625!1.19e-08!11;UBERON:0000119!1.81e-07!312;UBERON:0002073!3.31e-07!4;UBERON:0005086!3.31e-07!4;UBERON:0001874!4.60e-07!1;UBERON:0007190!6.97e-07!1;UBERON:0005085!7.15e-07!29;UBERON:0002336!7.40e-07!1;UBERON:0001018!7.40e-07!1;UBERON:0002473!7.40e-07!1;UBERON:0005340!7.40e-07!1;UBERON:0002316!7.40e-07!1;UBERON:0003544!7.40e-07!1;UBERON:0001020!7.40e-07!1;UBERON:0005970!7.40e-07!1;UBERON:0002437!7.40e-07!1;UBERON:0001801!8.15e-07!14 | |ontology_enrichment_uberon=UBERON:0002616!1.36e-21!59;UBERON:0002200!1.01e-18!11;UBERON:0006876!1.01e-18!11;UBERON:0003210!4.29e-18!3;UBERON:0000955!9.86e-18!69;UBERON:0006238!9.86e-18!69;UBERON:0001778!1.03e-17!3;UBERON:0001775!1.03e-17!3;UBERON:0004733!2.07e-17!12;UBERON:0002028!2.07e-17!12;UBERON:0007277!2.07e-17!12;UBERON:0001017!1.41e-16!82;UBERON:0002037!1.49e-16!6;UBERON:0006215!1.49e-16!6;UBERON:0002680!1.50e-16!9;UBERON:0001895!1.50e-16!9;UBERON:0010092!1.50e-16!9;UBERON:0004732!4.95e-16!13;UBERON:0003075!1.06e-15!86;UBERON:0007284!1.06e-15!86;UBERON:0005743!1.16e-15!86;UBERON:0002346!7.38e-15!90;UBERON:0000033!1.81e-14!123;UBERON:0001049!2.45e-14!57;UBERON:0005068!2.45e-14!57;UBERON:0006241!2.45e-14!57;UBERON:0007135!2.45e-14!57;UBERON:0000073!6.98e-14!94;UBERON:0001016!6.98e-14!94;UBERON:0003076!8.00e-14!15;UBERON:0003057!8.00e-14!15;UBERON:0000153!1.29e-13!129;UBERON:0007811!1.29e-13!129;UBERON:0000488!1.98e-13!4;UBERON:0004121!2.45e-13!169;UBERON:0000924!6.31e-13!173;UBERON:0006601!6.31e-13!173;UBERON:0005284!1.73e-11!5;UBERON:0000412!2.41e-09!3;UBERON:0001992!2.41e-09!3;UBERON:0003056!3.59e-09!61;UBERON:0002203!4.00e-09!6;UBERON:0001768!4.00e-09!6;UBERON:0007625!1.19e-08!11;UBERON:0000119!1.81e-07!312;UBERON:0002073!3.31e-07!4;UBERON:0005086!3.31e-07!4;UBERON:0001874!4.60e-07!1;UBERON:0007190!6.97e-07!1;UBERON:0005085!7.15e-07!29;UBERON:0002336!7.40e-07!1;UBERON:0001018!7.40e-07!1;UBERON:0002473!7.40e-07!1;UBERON:0005340!7.40e-07!1;UBERON:0002316!7.40e-07!1;UBERON:0003544!7.40e-07!1;UBERON:0001020!7.40e-07!1;UBERON:0005970!7.40e-07!1;UBERON:0002437!7.40e-07!1;UBERON:0001801!8.15e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.07e-33;3!UBERON:0001992;1.07e-33;3!UBERON:0002073;1.10e-20;5!UBERON:0002037;2.01e-17;6!UBERON:0002680;5.83e-12;9!UBERON:0002067;5.83e-12;9!UBERON:0001895;5.83e-12;9!UBERON:0002114;1.47e-09;2!UBERON:0004733;3.27e-09;12!UBERON:0002028;3.27e-09;12!UBERON:0004732;1.42e-08;13!UBERON:0001003;1.49e-07;15!UBERON:0007376;1.49e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,7.70e-34,3;UBERON:0001992,7.70e-34,3;UBERON:0002073,8.98e-21,5;UBERON:0005086,8.98e-21,5;UBERON:0002037,2.01e-17,6;UBERON:0006215,2.01e-17,6;UBERON:0002067,5.22e-12,9;UBERON:0004016,5.22e-12,9;UBERON:0010083,5.22e-12,9;UBERON:0002680,5.83e-12,9;UBERON:0001895,5.83e-12,9;UBERON:0010092,5.83e-12,9;UBERON:0002114,1.81e-09,2;UBERON:0004733,3.27e-09,12;UBERON:0002028,3.27e-09,12;UBERON:0007277,3.27e-09,12;UBERON:0004732,1.42e-08,13;UBERON:0001003,1.40e-07,15;UBERON:0007376,1.40e-07,15;UBERON:0007383,1.40e-07,15;UBERON:0003076,1.49e-07,15;UBERON:0003057,1.49e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811512834825538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,3.32861967686659,2.74514739048685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863347743867,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.331737779793674,1.18219047581419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811512834825538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,3.32861967686659,2.74514739048685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48863347743867,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.331737779793674,1.18219047581419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@AB464362 | |short_description=p7@AB464362 | ||
}} | }} |
Latest revision as of 16:45, 29 July 2015
Short description: | p7@AB464362 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_AB464362_5end |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | 131bp_to_AB464362_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 8.82e-51 | 2 |
hair follicle dermal papilla cell | 7.70e-34 | 3 |
stem cell of epidermis | 7.70e-34 | 3 |
pericyte cell | 5.23e-26 | 4 |
hair follicle cell | 8.98e-21 | 5 |
smooth muscle cell of the brain vasculature | 1.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 7.70e-34 | 3 |
papillary layer of dermis | 7.70e-34 | 3 |
hair follicle | 8.98e-21 | 5 |
hair follicle placode | 8.98e-21 | 5 |
cerebellum | 2.01e-17 | 6 |
rhombic lip | 2.01e-17 | 6 |
dermis | 5.22e-12 | 9 |
dermatome | 5.22e-12 | 9 |
future dermis | 5.22e-12 | 9 |
regional part of metencephalon | 5.83e-12 | 9 |
metencephalon | 5.83e-12 | 9 |
future metencephalon | 5.83e-12 | 9 |
duodenum | 1.81e-09 | 2 |
segmental subdivision of hindbrain | 3.27e-09 | 12 |
hindbrain | 3.27e-09 | 12 |
presumptive hindbrain | 3.27e-09 | 12 |
segmental subdivision of nervous system | 1.42e-08 | 13 |
skin epidermis | 1.40e-07 | 15 |
outer epithelium | 1.40e-07 | 15 |
enveloping layer of ectoderm | 1.40e-07 | 15 |
posterior neural tube | 1.49e-07 | 15 |
chordal neural plate | 1.49e-07 | 15 |