FFCP PHASE1:Hg19::chr4:127394496..127394500,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:127394496..127394500,- | |||
|coexpression_cluster_id=C4368 | |||
|description=CAGE_peak_at_chr4:127394496..127394500,- | |description=CAGE_peak_at_chr4:127394496..127394500,- | ||
|id=chr4:127394496..127394500,- | |id=chr4:127394496..127394500,- | ||
|ontology_enrichment_celltype=CL:0002274!6.02e-08!5;CL:0000457!6.02e-08!5;CL:0002191!6.02e-08!5;CL:0000097!6.02e-08!5;CL:0000831!6.02e-08!5;CL:0002028!6.02e-08!5 | |ontology_enrichment_celltype=CL:0002274!6.02e-08!5;CL:0000457!6.02e-08!5;CL:0002191!6.02e-08!5;CL:0000097!6.02e-08!5;CL:0000831!6.02e-08!5;CL:0002028!6.02e-08!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.37e-99;1!UBERON:0003056;4.27e-34;3 | |||
|ontology_enrichment_disease=DOID:1036!1.01e-13!8;DOID:8692!1.11e-09!31;DOID:1240!2.31e-07!39 | |ontology_enrichment_disease=DOID:1036!1.01e-13!8;DOID:8692!1.11e-09!31;DOID:1240!2.31e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.07e-13;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.07e-13,8 | |||
|ontology_enrichment_uberon=UBERON:0003714!5.20e-10!2 | |ontology_enrichment_uberon=UBERON:0003714!5.20e-10!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.37e-99;1!UBERON:0001785;9.37e-99;1!UBERON:0002464;9.37e-99;1!UBERON:0004904;9.37e-99;1!UBERON:0001021;9.37e-99;1!UBERON:0003714;2.74e-50;2!UBERON:0005162;2.74e-50;2!UBERON:0000122;2.74e-50;2!UBERON:0000010;2.19e-12;8!UBERON:0004732;5.28e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.37e-99,1;UBERON:0001785,9.37e-99,1;UBERON:0002464,9.37e-99,1;UBERON:0004904,9.37e-99,1;UBERON:0001021,9.37e-99,1;UBERON:0003902,9.37e-99,1;UBERON:0005425,9.37e-99,1;UBERON:0003714,2.74e-50,2;UBERON:0005162,2.74e-50,2;UBERON:0000122,2.74e-50,2;UBERON:0001781,5.56e-26,4;UBERON:0000966,7.67e-18,6;UBERON:0005388,7.67e-18,6;UBERON:0001802,7.67e-18,6;UBERON:0000010,2.19e-12,8;UBERON:0004732,5.28e-09,13 | |||
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| ||
|short_description=p@chr4:127394496..127394500,- | |short_description=p@chr4:127394496..127394500,- | ||
}} | }} |
Latest revision as of 01:28, 30 July 2015
Short description: | p@chr4:127394496..127394500, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:127394496..127394500, - |
Coexpression cluster: | C4368_optic_leukemia_myelodysplastic_occipital_CD8_chronic_cord |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.37e-99 | 1 |
cranial nerve | 9.37e-99 | 1 |
nerve trunk | 9.37e-99 | 1 |
nerve connecting eye with brain | 9.37e-99 | 1 |
nerve | 9.37e-99 | 1 |
retinal neural layer | 9.37e-99 | 1 |
presumptive neural retina | 9.37e-99 | 1 |
neural tissue | 2.74e-50 | 2 |
multi cell component structure | 2.74e-50 | 2 |
neuron projection bundle | 2.74e-50 | 2 |
layer of retina | 5.56e-26 | 4 |
retina | 7.67e-18 | 6 |
photoreceptor array | 7.67e-18 | 6 |
posterior segment of eyeball | 7.67e-18 | 6 |
peripheral nervous system | 2.19e-12 | 8 |
segmental subdivision of nervous system | 5.28e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.07e-13 | 8 |