FFCP PHASE1:Hg19::chr4:185771791..185771803,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:185771791..185771803,- | |||
|coexpression_cluster_id=C1939 | |||
|description=CAGE_peak_at_chr4:185771791..185771803,- | |description=CAGE_peak_at_chr4:185771791..185771803,- | ||
|id=chr4:185771791..185771803,- | |id=chr4:185771791..185771803,- | ||
|ontology_enrichment_celltype=CL:0002057!9.01e-50!42;CL:0000860!4.17e-46!45;CL:0000766!5.78e-39!76;CL:0002194!3.60e-37!63;CL:0000576!3.60e-37!63;CL:0000040!3.60e-37!63;CL:0000559!3.60e-37!63;CL:0002009!7.14e-36!65;CL:0000839!5.96e-33!70;CL:0000557!2.05e-32!71;CL:0000738!1.25e-31!140;CL:0002087!5.61e-31!119;CL:0000988!5.64e-30!182;CL:0002031!1.83e-29!124;CL:0002032!1.42e-27!165;CL:0000837!1.42e-27!165;CL:0000763!1.22e-26!112;CL:0000049!1.22e-26!112;CL:0000037!3.71e-26!172;CL:0000566!3.71e-26!172;CL:0000775!2.31e-15!3;CL:0000134!1.46e-09!358;CL:0002320!3.11e-09!365;CL:0000080!3.44e-08!6;CL:0000219!4.45e-08!390;CL:0000081!2.56e-07!11 | |ontology_enrichment_celltype=CL:0002057!9.01e-50!42;CL:0000860!4.17e-46!45;CL:0000766!5.78e-39!76;CL:0002194!3.60e-37!63;CL:0000576!3.60e-37!63;CL:0000040!3.60e-37!63;CL:0000559!3.60e-37!63;CL:0002009!7.14e-36!65;CL:0000839!5.96e-33!70;CL:0000557!2.05e-32!71;CL:0000738!1.25e-31!140;CL:0002087!5.61e-31!119;CL:0000988!5.64e-30!182;CL:0002031!1.83e-29!124;CL:0002032!1.42e-27!165;CL:0000837!1.42e-27!165;CL:0000763!1.22e-26!112;CL:0000049!1.22e-26!112;CL:0000037!3.71e-26!172;CL:0000566!3.71e-26!172;CL:0000775!2.31e-15!3;CL:0000134!1.46e-09!358;CL:0002320!3.11e-09!365;CL:0000080!3.44e-08!6;CL:0000219!4.45e-08!390;CL:0000081!2.56e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.53e-35;33!CL:0002057;1.53e-35;33!CL:0000473;4.49e-23;39!CL:0000234;4.49e-23;39!CL:0000576;3.00e-16;48!CL:0000775;9.43e-16;3!CL:0000766;7.93e-10;69!CL:0000081;1.04e-09;11!CL:0002087;1.46e-08;104!CL:0000763;5.85e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.20e-30,42;CL:0002057,4.20e-30,42;CL:0000473,3.62e-26,48;CL:0000234,3.62e-26,48;CL:0000766,1.26e-23,72;CL:0002194,1.19e-20,59;CL:0000576,1.19e-20,59;CL:0000040,1.19e-20,59;CL:0000559,1.19e-20,59;CL:0002009,6.14e-20,61;CL:0000839,2.42e-18,66;CL:0000557,4.74e-18,67;CL:0000988,5.62e-18,177;CL:0000738,4.69e-16,136;CL:0000775,9.80e-16,3;CL:0000763,3.10e-15,108;CL:0000049,3.10e-15,108;CL:0002087,3.16e-14,115;CL:0002031,1.46e-13,120;CL:0002032,2.95e-13,161;CL:0000837,2.95e-13,161;CL:0000037,1.28e-12,168;CL:0000081,1.12e-09,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.24e-20;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4960;7.02e-13;1!DOID:0070004;7.02e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,7.03e-13,1;DOID:0070004,7.03e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.48e-32!102;UBERON:0003061!1.48e-32!102;UBERON:0002371!5.53e-31!80;UBERON:0002193!4.29e-29!112;UBERON:0001474!1.91e-28!86;UBERON:0004765!2.08e-23!101;UBERON:0001434!2.08e-23!101;UBERON:0002405!1.08e-21!115;UBERON:0003081!3.86e-13!216;UBERON:0002204!5.78e-12!167;UBERON:0002384!8.71e-09!375 | |ontology_enrichment_uberon=UBERON:0002390!1.48e-32!102;UBERON:0003061!1.48e-32!102;UBERON:0002371!5.53e-31!80;UBERON:0002193!4.29e-29!112;UBERON:0001474!1.91e-28!86;UBERON:0004765!2.08e-23!101;UBERON:0001434!2.08e-23!101;UBERON:0002405!1.08e-21!115;UBERON:0003081!3.86e-13!216;UBERON:0002204!5.78e-12!167;UBERON:0002384!8.71e-09!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;7.82e-11;10!UBERON:0000178;2.18e-07;15!UBERON:0000179;2.18e-07;15!UBERON:0000463;2.18e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.74e-23,98;UBERON:0003061,3.74e-23,98;UBERON:0002193,7.58e-21,108;UBERON:0002371,5.94e-19,76;UBERON:0001474,1.83e-17,82;UBERON:0004765,8.77e-16,90;UBERON:0002405,3.16e-15,93;UBERON:0001434,4.69e-14,100;UBERON:0002331,8.36e-11,10;UBERON:0000358,8.36e-11,10;UBERON:0000307,8.36e-11,10;UBERON:0000091,8.36e-11,10;UBERON:0000087,8.36e-11,10;UBERON:0007010,8.36e-11,10;UBERON:0007806,8.36e-11,10;UBERON:0008780,8.36e-11,10;UBERON:0005728,8.36e-11,10;UBERON:0003081,3.66e-10,203;UBERON:0002204,9.25e-08,167;UBERON:0000178,2.28e-07,15;UBERON:0000179,2.28e-07,15;UBERON:0000463,2.28e-07,15 | |||
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|short_description=p@chr4:185771791..185771803,- | |short_description=p@chr4:185771791..185771803,- | ||
}} | }} |
Latest revision as of 03:56, 30 July 2015
Short description: | p@chr4:185771791..185771803, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:185771791..185771803, - |
Coexpression cluster: | C1939_cord_myeloma_CD14_Neutrophils_b_Whole_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.20e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.20e-30 | 42 |
defensive cell | 3.62e-26 | 48 |
phagocyte | 3.62e-26 | 48 |
myeloid leukocyte | 1.26e-23 | 72 |
monopoietic cell | 1.19e-20 | 59 |
monocyte | 1.19e-20 | 59 |
monoblast | 1.19e-20 | 59 |
promonocyte | 1.19e-20 | 59 |
macrophage dendritic cell progenitor | 6.14e-20 | 61 |
myeloid lineage restricted progenitor cell | 2.42e-18 | 66 |
granulocyte monocyte progenitor cell | 4.74e-18 | 67 |
hematopoietic cell | 5.62e-18 | 177 |
leukocyte | 4.69e-16 | 136 |
neutrophil | 9.80e-16 | 3 |
myeloid cell | 3.10e-15 | 108 |
common myeloid progenitor | 3.10e-15 | 108 |
nongranular leukocyte | 3.16e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 1.46e-13 | 120 |
hematopoietic oligopotent progenitor cell | 2.95e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.95e-13 | 161 |
hematopoietic stem cell | 1.28e-12 | 168 |
blood cell | 1.12e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.74e-23 | 98 |
blood island | 3.74e-23 | 98 |
hemolymphoid system | 7.58e-21 | 108 |
bone marrow | 5.94e-19 | 76 |
bone element | 1.83e-17 | 82 |
skeletal element | 8.77e-16 | 90 |
immune system | 3.16e-15 | 93 |
skeletal system | 4.69e-14 | 100 |
umbilical cord | 8.36e-11 | 10 |
blastocyst | 8.36e-11 | 10 |
blastula | 8.36e-11 | 10 |
bilaminar disc | 8.36e-11 | 10 |
inner cell mass | 8.36e-11 | 10 |
cleaving embryo | 8.36e-11 | 10 |
connecting stalk | 8.36e-11 | 10 |
inner cell mass derived epiblast | 8.36e-11 | 10 |
extraembryonic mesoderm | 8.36e-11 | 10 |
lateral plate mesoderm | 3.66e-10 | 203 |
musculoskeletal system | 9.25e-08 | 167 |
blood | 2.28e-07 | 15 |
haemolymphatic fluid | 2.28e-07 | 15 |
organism substance | 2.28e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 7.03e-13 | 1 |
myeloma | 7.03e-13 | 1 |