FFCP PHASE1:Hg19::chr4:188963120..188963125,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:188963120..188963125,+ | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_at_chr4:188963120..188963125,+ | |description=CAGE_peak_at_chr4:188963120..188963125,+ | ||
|id=chr4:188963120..188963125,+ | |id=chr4:188963120..188963125,+ | ||
|ontology_enrichment_celltype=CL:0000039!7.68e-67!7;CL:0000586!7.68e-67!7;CL:0000319!1.10e-10!1;CL:0000083!1.15e-10!4 | |ontology_enrichment_celltype=CL:0000039!7.68e-67!7;CL:0000586!7.68e-67!7;CL:0000319!1.10e-10!1;CL:0000083!1.15e-10!4 | ||
|ontology_enrichment_celltype_v019=CL:0000039;7.19e-101;7!CL:0000586;7.19e-101;7!CL:0000083;9.45e-21;4!CL:0000054;3.70e-11;2!CL:0000137;3.70e-11;2!CL:0000092;3.70e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.20e-101,7;CL:0000586,7.20e-101,7;CL:0000083,1.15e-20,4;CL:0000054,3.02e-11,2;CL:0000137,3.02e-11,2;CL:0000092,3.02e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.62e-18;10!UBERON:0005564;2.62e-18;10 | |||
|ontology_enrichment_disease=DOID:3095!5.17e-27!22;DOID:2994!5.17e-27!22;DOID:0050687!1.73e-14!143;DOID:305!5.84e-13!106;DOID:0060085!4.15e-11!1;DOID:3165!4.15e-11!1;DOID:0060121!4.15e-11!1;DOID:2438!4.15e-11!1;DOID:4418!4.15e-11!1;DOID:1799!6.14e-11!1;DOID:10165!6.14e-11!1;DOID:1798!6.14e-11!1;DOID:3030!1.10e-10!1;DOID:1793!1.15e-10!4;DOID:162!5.51e-09!235;DOID:14566!9.68e-09!239;DOID:170!2.16e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.89e-32;22!DOID:2994;2.89e-32;22!DOID:0060085;6.31e-21;1!DOID:1799;6.31e-21;1!DOID:10165;6.31e-21;1!DOID:3165;6.31e-21;1!DOID:0060121;6.31e-21;1!DOID:2438;6.31e-21;1!DOID:4418;6.31e-21;1!DOID:1798;6.31e-21;1!DOID:1793;9.45e-21;4!DOID:170;3.48e-14;6!DOID:4074;2.47e-11;2!DOID:4905;2.47e-11;2!DOID:3498;2.47e-11;2!DOID:200;3.70e-11;2!DOID:4305;3.70e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.89e-32,22;DOID:2994,2.89e-32,22;DOID:0060085,4.22e-21,1;DOID:3165,4.22e-21,1;DOID:0060121,4.22e-21,1;DOID:2438,4.22e-21,1;DOID:4418,4.22e-21,1;DOID:1799,9.43e-21,1;DOID:10165,9.43e-21,1;DOID:1798,9.43e-21,1;DOID:1793,1.15e-20,4;DOID:170,3.97e-14,6;DOID:4074,2.47e-11,2;DOID:4905,2.47e-11,2;DOID:3498,2.47e-11,2;DOID:200,3.02e-11,2;DOID:4305,3.02e-11,2;DOID:0050687,1.67e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.45e-29!8;UBERON:0003135!1.66e-21!11;UBERON:0002323!2.68e-12!46;UBERON:0004458!1.74e-11!49;UBERON:0000991!3.14e-11!21;UBERON:0009196!3.14e-11!21;UBERON:0009117!3.14e-11!21;UBERON:0005564!3.14e-11!21;UBERON:0004176!1.03e-10!22;UBERON:0003101!1.03e-10!22;UBERON:0000079!1.03e-10!22;UBERON:0003886!1.03e-08!63;UBERON:0002553!9.60e-08!70 | |ontology_enrichment_uberon=UBERON:0000473!1.45e-29!8;UBERON:0003135!1.66e-21!11;UBERON:0002323!2.68e-12!46;UBERON:0004458!1.74e-11!49;UBERON:0000991!3.14e-11!21;UBERON:0009196!3.14e-11!21;UBERON:0009117!3.14e-11!21;UBERON:0005564!3.14e-11!21;UBERON:0004176!1.03e-10!22;UBERON:0003101!1.03e-10!22;UBERON:0000079!1.03e-10!22;UBERON:0003886!1.03e-08!63;UBERON:0002553!9.60e-08!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.08e-22;8!UBERON:0003135;1.03e-16;11!UBERON:0002323;5.62e-10;45!UBERON:0000991;4.56e-09;21!UBERON:0001264;6.80e-09;10!UBERON:0003101;1.11e-08;22!UBERON:0000079;1.11e-08;22!UBERON:0002553;1.70e-07;52!UBERON:0004458;2.33e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.08e-22,8;UBERON:0003135,1.03e-16,11;UBERON:0002323,7.96e-11,46;UBERON:0004458,3.60e-10,49;UBERON:0003886,3.09e-09,54;UBERON:0000991,4.56e-09,21;UBERON:0009196,4.56e-09,21;UBERON:0009117,4.56e-09,21;UBERON:0005564,4.56e-09,21;UBERON:0001264,7.36e-09,10;UBERON:0004176,1.11e-08,22;UBERON:0003101,1.11e-08,22;UBERON:0000079,1.11e-08,22;UBERON:0002553,3.47e-08,61 | |||
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|short_description=p@chr4:188963120..188963125,+ | |short_description=p@chr4:188963120..188963125,+ | ||
}} | }} |
Latest revision as of 04:12, 30 July 2015
Short description: | p@chr4:188963120..188963125, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:188963120..188963125, + |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.20e-101 | 7 |
germ cell | 7.20e-101 | 7 |
epithelial cell of pancreas | 1.15e-20 | 4 |
bone matrix secreting cell | 3.02e-11 | 2 |
osteocyte | 3.02e-11 | 2 |
osteoclast | 3.02e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 1.08e-22 | 8 |
male reproductive organ | 1.03e-16 | 11 |
body cavity | 7.96e-11 | 46 |
body cavity or lining | 3.60e-10 | 49 |
body cavity precursor | 3.09e-09 | 54 |
gonad | 4.56e-09 | 21 |
indifferent external genitalia | 4.56e-09 | 21 |
indifferent gonad | 4.56e-09 | 21 |
gonad primordium | 4.56e-09 | 21 |
pancreas | 7.36e-09 | 10 |
external genitalia | 1.11e-08 | 22 |
male organism | 1.11e-08 | 22 |
male reproductive system | 1.11e-08 | 22 |
anatomical cavity | 3.47e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.89e-32 | 22 |
germ cell cancer | 2.89e-32 | 22 |
organ system benign neoplasm | 4.22e-21 | 1 |
skin benign neoplasm | 4.22e-21 | 1 |
integumentary system benign neoplasm | 4.22e-21 | 1 |
dermis tumor | 4.22e-21 | 1 |
cutaneous fibrous histiocytoma | 4.22e-21 | 1 |
islet cell tumor | 9.43e-21 | 1 |
endocrine pancreas cancer | 9.43e-21 | 1 |
pancreatic endocrine carcinoma | 9.43e-21 | 1 |
pancreatic cancer | 1.15e-20 | 4 |
endocrine gland cancer | 3.97e-14 | 6 |
pancreas adenocarcinoma | 2.47e-11 | 2 |
pancreatic carcinoma | 2.47e-11 | 2 |
pancreatic ductal adenocarcinoma | 2.47e-11 | 2 |
giant cell tumor | 3.02e-11 | 2 |
bone giant cell tumor | 3.02e-11 | 2 |
cell type cancer | 1.67e-08 | 143 |