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FFCP PHASE1:Hg19::chr4:7412700..7412704,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:7412700..7412704,+
|DHSsupport=supported 
|short_description=p@chr4:7412700..7412704,+
|DPIdataset=robust
|description=CAGE_peak_at_chr4:7412700..7412704,+
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr4:7412700..7412704,+
|description=CAGE_peak_at_chr4:7412700..7412704,+
|id=chr4:7412700..7412704,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=CL:0000047;4.32e-26;2!CL:0000306;1.13e-13;4!CL:0002222;1.13e-13;4!CL:0002224;1.13e-13;4
|ontology_enrichment_celltype_v019_2=CL:0000306,1.13e-13,4;CL:0002222,1.13e-13,4;CL:0002224,1.13e-13,4;CL:0000047,1.49e-07,8
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.99e-26!57;UBERON:0005068!1.99e-26!57;UBERON:0006241!1.99e-26!57;UBERON:0007135!1.99e-26!57;UBERON:0002780!1.44e-25!41;UBERON:0001890!1.44e-25!41;UBERON:0006240!1.44e-25!41;UBERON:0003080!8.95e-25!42;UBERON:0001893!9.93e-25!34;UBERON:0002020!1.13e-24!34;UBERON:0003528!1.13e-24!34;UBERON:0007023!1.07e-23!115;UBERON:0002791!1.47e-23!33;UBERON:0002616!1.74e-23!59;UBERON:0003056!1.97e-22!61;UBERON:0003075!3.78e-22!86;UBERON:0007284!3.78e-22!86;UBERON:0001017!5.68e-22!82;UBERON:0005743!7.60e-22!86;UBERON:0001869!1.55e-21!32;UBERON:0000955!2.80e-21!69;UBERON:0006238!2.80e-21!69;UBERON:0002346!1.19e-20!90;UBERON:0000073!1.01e-18!94;UBERON:0001016!1.01e-18!94;UBERON:0002619!3.82e-15!22;UBERON:0000956!1.17e-14!25;UBERON:0000203!1.17e-14!25;UBERON:0000033!1.61e-14!123;UBERON:0001950!1.78e-14!20;UBERON:0000153!3.35e-14!129;UBERON:0007811!3.35e-14!129;UBERON:0002308!1.87e-12!9;UBERON:0000125!1.87e-12!9;UBERON:0004121!2.76e-10!169;UBERON:0000924!8.75e-10!173;UBERON:0006601!8.75e-10!173;UBERON:0009663!1.80e-09!7;UBERON:0002420!2.22e-09!9;UBERON:0007245!2.22e-09!9;UBERON:0010009!2.22e-09!9;UBERON:0010011!2.22e-09!9;UBERON:0000454!2.22e-09!9;UBERON:0002298!1.37e-08!8;UBERON:0000200!1.20e-07!6;UBERON:0000064!3.82e-07!219;UBERON:0000475!8.56e-07!365;UBERON:0001872!9.84e-07!5
|ontology_enrichment_uberon_v019=UBERON:0002336;3.99e-50;1!UBERON:0011215;3.99e-50;1!UBERON:0001018;3.99e-50;1!UBERON:0002473;3.99e-50;1!UBERON:0005340;3.99e-50;1!UBERON:0003544;3.99e-50;1!UBERON:0005970;3.99e-50;1!UBERON:0002316;3.99e-50;1!UBERON:0001020;3.99e-50;1!UBERON:0002437;3.99e-50;1!UBERON:0005162;7.14e-26;2!UBERON:0000122;7.14e-26;2!UBERON:0010077;1.13e-13;4!UBERON:0005389;1.13e-13;4!UBERON:0000484;1.13e-13;4!UBERON:0000965;1.13e-13;4!UBERON:0001803;1.13e-13;4
|ontology_enrichment_uberon_v019_2=UBERON:0002336,6.58e-50,1;UBERON:0011215,6.58e-50,1;UBERON:0001018,6.58e-50,1;UBERON:0002473,6.58e-50,1;UBERON:0005340,6.58e-50,1;UBERON:0003544,6.58e-50,1;UBERON:0005970,6.58e-50,1;UBERON:0002316,6.58e-50,1;UBERON:0001020,6.58e-50,1;UBERON:0002437,6.58e-50,1;UBERON:0005162,9.18e-26,2;UBERON:0000122,9.18e-26,2;UBERON:0010077,1.13e-13,4;UBERON:0005389,1.13e-13,4;UBERON:0000484,1.13e-13,4;UBERON:0002546,1.13e-13,4;UBERON:0000965,1.13e-13,4;UBERON:0001803,1.13e-13,4;UBERON:0003073,1.13e-13,4;UBERON:0005426,1.13e-13,4;UBERON:0000076,1.69e-07,8
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.283604451492204,0,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0.194874010322397,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.330881918197182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,2.60279707715243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0.382838137483752,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0.111308705022906,0,1.68900326502395,0.19924798825107,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.384751292518985,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,1.14581926067151,0,0.468528891450678,0,0,0,0,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0,0,0,0,0,0,0.451961481561065,0,0,0.126621591911757,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.607495566580247,0,0.157611414598396,0,0,0,0,0,0,0.25426853765475,0,0,0,1.19730191562487,0,0,0,0,0,0.646414781807753,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.443716206147409,0.558867626472451,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0.226705925512272,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,0,0,0.205116364240755,0.756215088665154,0.345786262321089,0.322951291263702,0,0,0,0,0.115525666150338,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.634158101939068,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0.40781839786099,0.460409414939944,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.285906176706625,0.790068058663633,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0,0.169927114687817,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0.716697915757256,0,0.203974470572744,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,0,0.186224142887574,0,0,0.202117188958219,0.435433495793923,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0.366724332548599,0.406896178315738,0.665756774185513,0,0
|short_description=p@chr4:7412700..7412704,+
}}
}}

Latest revision as of 06:32, 30 July 2015

Short description:p@chr4:7412700..7412704, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr4:7412700..7412704, +
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data