FFCP PHASE1:Hg19::chr5:149792614..149792625,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:149792614..149792625,+ | |||
|coexpression_cluster_id=C569 | |||
|description=CAGE_peak_at_chr5:149792614..149792625,+ | |description=CAGE_peak_at_chr5:149792614..149792625,+ | ||
|id=chr5:149792614..149792625,+ | |id=chr5:149792614..149792625,+ | ||
|ontology_enrichment_celltype=CL:0000738!9.15e-91!140;CL:0000037!1.89e-79!172;CL:0000566!1.89e-79!172;CL:0000988!9.66e-76!182;CL:0002087!1.54e-75!119;CL:0002031!7.47e-72!124;CL:0002032!4.92e-71!165;CL:0000837!4.92e-71!165;CL:0002057!1.06e-59!42;CL:0000860!6.61e-55!45;CL:0002009!2.31e-47!65;CL:0000766!2.46e-47!76;CL:0000557!2.67e-44!71;CL:0002194!5.38e-44!63;CL:0000576!5.38e-44!63;CL:0000040!5.38e-44!63;CL:0000559!5.38e-44!63;CL:0000763!5.14e-42!112;CL:0000049!5.14e-42!112;CL:0000839!2.60e-40!70;CL:0000134!3.50e-28!358;CL:0002320!3.40e-27!365;CL:0000838!1.64e-25!52;CL:0000542!7.32e-25!53;CL:0000051!7.32e-25!53;CL:0000219!1.01e-23!390;CL:0000945!1.34e-23!24;CL:0000826!1.34e-23!24;CL:0000048!1.43e-19!430;CL:0000723!5.56e-19!436;CL:0000034!3.20e-18!444;CL:0002393!9.28e-18!9;CL:0002397!9.28e-18!9;CL:0000236!7.24e-17!14;CL:0000451!9.29e-11!10;CL:0000453!7.39e-10!5;CL:0000063!1.13e-08!578;CL:0002371!2.22e-08!591;CL:0000990!1.24e-07!8;CL:0000784!3.11e-07!3;CL:0000767!4.15e-07!3 | |ontology_enrichment_celltype=CL:0000738!9.15e-91!140;CL:0000037!1.89e-79!172;CL:0000566!1.89e-79!172;CL:0000988!9.66e-76!182;CL:0002087!1.54e-75!119;CL:0002031!7.47e-72!124;CL:0002032!4.92e-71!165;CL:0000837!4.92e-71!165;CL:0002057!1.06e-59!42;CL:0000860!6.61e-55!45;CL:0002009!2.31e-47!65;CL:0000766!2.46e-47!76;CL:0000557!2.67e-44!71;CL:0002194!5.38e-44!63;CL:0000576!5.38e-44!63;CL:0000040!5.38e-44!63;CL:0000559!5.38e-44!63;CL:0000763!5.14e-42!112;CL:0000049!5.14e-42!112;CL:0000839!2.60e-40!70;CL:0000134!3.50e-28!358;CL:0002320!3.40e-27!365;CL:0000838!1.64e-25!52;CL:0000542!7.32e-25!53;CL:0000051!7.32e-25!53;CL:0000219!1.01e-23!390;CL:0000945!1.34e-23!24;CL:0000826!1.34e-23!24;CL:0000048!1.43e-19!430;CL:0000723!5.56e-19!436;CL:0000034!3.20e-18!444;CL:0002393!9.28e-18!9;CL:0002397!9.28e-18!9;CL:0000236!7.24e-17!14;CL:0000451!9.29e-11!10;CL:0000453!7.39e-10!5;CL:0000063!1.13e-08!578;CL:0002371!2.22e-08!591;CL:0000990!1.24e-07!8;CL:0000784!3.11e-07!3;CL:0000767!4.15e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.71e-37;33!CL:0002057;5.71e-37;33!CL:0000236;8.75e-31;13!CL:0000576;2.16e-30;48!CL:0000473;1.83e-24;39!CL:0000234;1.83e-24;39!CL:0000945;7.48e-24;24!CL:0002393;4.21e-22;6!CL:0002397;4.21e-22;6!CL:0000766;4.81e-18;69!CL:0002087;2.62e-17;104!CL:0000738;8.51e-12;136!CL:0000763;4.35e-09;100!CL:0000988;2.23e-08;177!CL:0000784;5.78e-08;3!CL:0000542;1.81e-07;53!CL:0000219;4.61e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.62e-54,42;CL:0002057,1.62e-54,42;CL:0000738,7.88e-51,136;CL:0002087,4.69e-48,115;CL:0000473,4.35e-47,48;CL:0000234,4.35e-47,48;CL:0002031,5.34e-46,120;CL:0002009,7.08e-43,61;CL:0002194,1.84e-40,59;CL:0000576,1.84e-40,59;CL:0000040,1.84e-40,59;CL:0000559,1.84e-40,59;CL:0000037,6.52e-40,168;CL:0000766,8.94e-39,72;CL:0000557,1.27e-38,67;CL:0000988,1.51e-37,177;CL:0002032,3.47e-37,161;CL:0000837,3.47e-37,161;CL:0000839,1.07e-35,66;CL:0000236,4.42e-29,14;CL:0000763,1.71e-26,108;CL:0000049,1.71e-26,108;CL:0000945,3.50e-24,24;CL:0000826,3.50e-24,24;CL:0000134,2.53e-15,354;CL:0002320,6.88e-15,361;CL:0002393,1.30e-14,9;CL:0002397,1.30e-14,9;CL:0000219,2.35e-13,386;CL:0000048,1.77e-11,427;CL:0000723,3.22e-11,433;CL:0000034,6.97e-11,441;CL:0000838,5.20e-10,52;CL:0000542,8.80e-10,53;CL:0000051,8.80e-10,53;CL:0000784,5.60e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.12e-36;42!CL:0000051;1.81e-07;53 | |||
|ontology_enrichment_disease=DOID:0060058!6.29e-10!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.98e-40!80;UBERON:0002390!1.11e-39!102;UBERON:0003061!1.11e-39!102;UBERON:0002193!2.75e-36!112;UBERON:0001474!4.59e-36!86;UBERON:0004765!9.86e-29!101;UBERON:0001434!9.86e-29!101;UBERON:0002405!4.38e-26!115;UBERON:0002384!7.53e-26!375;UBERON:0002204!2.11e-12!167;UBERON:0003081!7.50e-12!216 | |ontology_enrichment_uberon=UBERON:0002371!8.98e-40!80;UBERON:0002390!1.11e-39!102;UBERON:0003061!1.11e-39!102;UBERON:0002193!2.75e-36!112;UBERON:0001474!4.59e-36!86;UBERON:0004765!9.86e-29!101;UBERON:0001434!9.86e-29!101;UBERON:0002405!4.38e-26!115;UBERON:0002384!7.53e-26!375;UBERON:0002204!2.11e-12!167;UBERON:0003081!7.50e-12!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.74e-33,76;UBERON:0001474,1.11e-30,82;UBERON:0004765,1.63e-27,90;UBERON:0002390,3.58e-27,98;UBERON:0003061,3.58e-27,98;UBERON:0002405,1.82e-26,93;UBERON:0001434,2.91e-24,100;UBERON:0002193,3.56e-24,108;UBERON:0002384,2.70e-14,371;UBERON:0002204,1.77e-12,167;UBERON:0003081,2.23e-10,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14620108621927,0.821005894499457,1.41679406364623,0.786728553697808,0.767658796194425,2.01260960310899,0,0,0,0.232401601740905,0,0.293600439334847,2.21598163412751,2.80762226458198,4.55722828503289,0,0,0.257575567634187,0.436194716338694,0.755751887377619,0,0.232429036905685,0.822335776043652,0.619412741790207,1.7261543539329,1.5369642391746,3.54723344832878,0.689491361473237,0,2.70852973188684,0,0.545812300115692,1.12361742222542,1.53041946185451,0.641858054152187,1.27867425159808,1.64925650093358,1.79517291859469,2.13112375266347,0.580418477257168,1.13477044938228,0.622822248995575,1.25624332628372,0,2.6062661364614,0,1.10483290796269,1.89877432464531,1.47878700418359,0.850417199860174,1.25795187305026,1.23561494261145,1.05123824989054,0.48217676009124,0.570025487482497,0.19891667719909,0.365328307529268,1.75996244461323,1.63841583378639,0,2.98711155796555,0.400395987036012,1.72425731986345,1.32208974556972,1.90810750907073,2.27685187643779,2.93618594685469,1.52909291250092,0,0,0,0.196709770113833,0,0,0,0,0,0,0.445641827540694,0,0,0,0.384273959177026,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38490624305342,0.571994910780128,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.985153801009636,0.431255149719035,0.77005821767849,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0.674921674654501,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.398594520940089,0.490696182767533,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14620108621927,0.821005894499457,1.41679406364623,0.786728553697808,0.767658796194425,2.01260960310899,0,0,0,0.232401601740905,0,0.293600439334847,2.21598163412751,2.80762226458198,4.55722828503289,0,0,0.257575567634187,0.436194716338694,0.755751887377619,0,0.232429036905685,0.822335776043652,0.619412741790207,1.7261543539329,1.5369642391746,3.54723344832878,0.689491361473237,0,2.70852973188684,0,0.545812300115692,1.12361742222542,1.53041946185451,0.641858054152187,1.27867425159808,1.64925650093358,1.79517291859469,2.13112375266347,0.580418477257168,1.13477044938228,0.622822248995575,1.25624332628372,0,2.6062661364614,0,1.10483290796269,1.89877432464531,1.47878700418359,0.850417199860174,1.25795187305026,1.23561494261145,1.05123824989054,0.48217676009124,0.570025487482497,0.19891667719909,0.365328307529268,1.75996244461323,1.63841583378639,0,2.98711155796555,0.400395987036012,1.72425731986345,1.32208974556972,1.90810750907073,2.27685187643779,2.93618594685469,1.52909291250092,0,0,0,0.196709770113833,0,0,0,0,0,0,0.445641827540694,0,0,0,0.384273959177026,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38490624305342,0.571994910780128,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0.985153801009636,0.431255149719035,0.77005821767849,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0.674921674654501,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.398594520940089,0.490696182767533,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:149792614..149792625,+ | |short_description=p@chr5:149792614..149792625,+ | ||
}} | }} |
Latest revision as of 11:37, 30 July 2015
Short description: | p@chr5:149792614..149792625, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:149792614..149792625, + |
Coexpression cluster: | C569_CD14_immature_CD19_Basophils_migratory_Dendritic_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.74e-33 | 76 |
bone element | 1.11e-30 | 82 |
skeletal element | 1.63e-27 | 90 |
hematopoietic system | 3.58e-27 | 98 |
blood island | 3.58e-27 | 98 |
immune system | 1.82e-26 | 93 |
skeletal system | 2.91e-24 | 100 |
hemolymphoid system | 3.56e-24 | 108 |
connective tissue | 2.70e-14 | 371 |
musculoskeletal system | 1.77e-12 | 167 |
lateral plate mesoderm | 2.23e-10 | 203 |