FFCP PHASE1:Hg19::chr5:176874773..176874785,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-73bp_to_ENST00000425316_5end | |||
|cluster_id=chr5:176874773..176874785,- | |||
|description=CAGE_peak_1_at_ENST00000425316_5end | |||
|id=chr5:176874773..176874785,- | |||
|ontology_enrichment_celltype=CL:0000147!6.42e-11!14;CL:0000148!3.05e-10!10;CL:0000541!3.05e-10!10;CL:0000333!3.86e-09!41;CL:0000243!9.54e-08!15;CL:0000125!9.54e-08!15;CL:0000030!9.54e-08!15;CL:0000339!9.54e-08!15;CL:0000133!7.68e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.57e-27;2!CL:0000182;1.40e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.57e-10,12;CL:0000223,5.57e-08,58;CL:0000047,1.76e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.73e-11;11!UBERON:0009497;8.27e-10;13!UBERON:0001041;2.25e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;5.80e-15;1!DOID:3493;3.56e-08;2!DOID:3910;4.53e-08;2!DOID:4074;6.80e-08;2!DOID:4905;6.80e-08;2!DOID:3498;6.80e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,6.22e-15,1;DOID:3493,3.56e-08,2;DOID:3910,4.69e-08,2;DOID:4074,5.74e-08,2;DOID:4905,5.74e-08,2;DOID:3498,5.74e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005743!2.31e-31!86;UBERON:0000073!2.05e-28!94;UBERON:0001016!2.05e-28!94;UBERON:0001017!2.87e-28!82;UBERON:0000955!1.66e-26!69;UBERON:0006238!1.66e-26!69;UBERON:0001049!2.42e-26!57;UBERON:0005068!2.42e-26!57;UBERON:0006241!2.42e-26!57;UBERON:0007135!2.42e-26!57;UBERON:0004121!1.12e-21!169;UBERON:0000033!1.41e-21!123;UBERON:0002616!1.71e-21!59;UBERON:0000924!8.73e-21!173;UBERON:0006601!8.73e-21!173;UBERON:0003075!3.78e-20!86;UBERON:0007284!3.78e-20!86;UBERON:0000153!6.49e-20!129;UBERON:0007811!6.49e-20!129;UBERON:0002346!9.50e-19!90;UBERON:0002780!4.61e-16!41;UBERON:0001890!4.61e-16!41;UBERON:0006240!4.61e-16!41;UBERON:0003080!1.57e-15!42;UBERON:0003056!2.24e-13!61;UBERON:0001893!2.96e-13!34;UBERON:0002020!5.24e-13!34;UBERON:0003528!5.24e-13!34;UBERON:0003076!6.18e-13!15;UBERON:0003057!6.18e-13!15;UBERON:0007023!6.83e-13!115;UBERON:0002791!4.22e-12!33;UBERON:0004733!5.32e-11!12;UBERON:0002028!5.32e-11!12;UBERON:0007277!5.32e-11!12;UBERON:0001869!6.21e-11!32;UBERON:0002298!8.16e-11!8;UBERON:0004732!5.41e-10!13;UBERON:0000956!1.12e-09!25;UBERON:0000203!1.12e-09!25;UBERON:0000475!1.60e-09!365;UBERON:0002619!2.44e-08!22;UBERON:0000025!3.45e-08!194;UBERON:0001950!1.04e-07!20;UBERON:0002680!8.20e-07!9;UBERON:0001895!8.20e-07!9;UBERON:0010092!8.20e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;7.63e-15;1!UBERON:0011215;7.63e-15;1!UBERON:0001018;7.63e-15;1!UBERON:0002473;7.63e-15;1!UBERON:0005340;7.63e-15;1!UBERON:0003544;7.63e-15;1!UBERON:0005970;7.63e-15;1!UBERON:0002316;7.63e-15;1!UBERON:0001020;7.63e-15;1!UBERON:0002437;7.63e-15;1!UBERON:0004903;4.53e-08;2!UBERON:0005162;4.53e-08;2!UBERON:0000122;4.53e-08;2!UBERON:0002173;4.53e-08;2!UBERON:0002186;4.53e-08;2!UBERON:0000949;6.39e-07;43!UBERON:0002107;7.12e-07;19!UBERON:0006925;7.12e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,7.13e-15,1;UBERON:0011215,7.13e-15,1;UBERON:0001018,7.13e-15,1;UBERON:0002473,7.13e-15,1;UBERON:0005340,7.13e-15,1;UBERON:0003544,7.13e-15,1;UBERON:0005970,7.13e-15,1;UBERON:0002316,7.13e-15,1;UBERON:0001020,7.13e-15,1;UBERON:0002437,7.13e-15,1;UBERON:0007499,8.96e-09,25;UBERON:0009856,1.91e-08,26;UBERON:0005162,4.38e-08,2;UBERON:0000122,4.38e-08,2;UBERON:0004903,4.69e-08,2;UBERON:0002173,4.69e-08,2;UBERON:0002186,4.69e-08,2;UBERON:0000949,2.59e-07,45;UBERON:0002107,7.64e-07,19;UBERON:0006925,7.64e-07,19;UBERON:0008836,7.64e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.626909442956176,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,1.94653948121054,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0.286804595389004,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0.253991577168676,0.381988425558278,0,1.71072446022705,0.514137463516618,0.600686115687835,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.769350375349168,0,0.325378394664303,0,0,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27308917445131,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,2.3590396543237,0,0.234264445725339,0,0,1.69946265673865,0,0,0,0.063186579628488,0,0,0,1.323967823502,0.627865836814451,0,0,0.832048038078832,0,0,0.0870592065804026,0,0,0,0,0.164230914106418,0,0,0,0.959293472527256,0,0.443175571691151,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0.418411385249333,0.203996435272644,0.288950589901519,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,1.10296455230113,0.659326867049332,1.41547442093788,0,0,0,0.681017030557878,0,0,0,0,0,0.303747783290123,0,0,0,0,0.179287339332845,0,0,0,3.81402806482125,0,0,0,0,0,0,0.566560457600628,0,0,0.258565912723101,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0.332787154610557,0.869349641179368,0,0.499921631848426,0.758245587708239,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0.319267718114302,0.615349092722265,0,0.622415272177961,0.322951291263702,0,0,0.235939446695481,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0.675375846183947,0,0.206686796501184,0.634158101939068,0,0,0,0,0,0,0,0,0.455324382702595,0,0,3.08678416987353,0.815636795721981,0.197318320688547,0,0,0,0,0,0,0,0,0.929195074296532,0,1.16241425368125,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,8.73537079175662,0.609589624911347,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,1.2679671827502,0,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0.573358332605805,0,0.339957450954573,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.606229585745915,0.803892390468535,0.829169439458779,0.517164979309476,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000425316 | |||
}} |
Latest revision as of 13:38, 30 July 2015
Short description: | p1@ENST00000425316 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000425316_5end |
Coexpression cluster: | NA |
Association with transcript: | -73bp_to_ENST00000425316_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.57e-10 | 12 |
endodermal cell | 5.57e-08 | 58 |
neuronal stem cell | 1.76e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
corpus callosum | 7.13e-15 | 1 |
central nervous system cell part cluster | 7.13e-15 | 1 |
axon tract | 7.13e-15 | 1 |
intercerebral commissure | 7.13e-15 | 1 |
dorsal telencephalic commissure | 7.13e-15 | 1 |
brain white matter | 7.13e-15 | 1 |
brain commissure | 7.13e-15 | 1 |
white matter | 7.13e-15 | 1 |
nervous system commissure | 7.13e-15 | 1 |
cerebral hemisphere white matter | 7.13e-15 | 1 |
epithelial sac | 8.96e-09 | 25 |
sac | 1.91e-08 | 26 |
multi cell component structure | 4.38e-08 | 2 |
neuron projection bundle | 4.38e-08 | 2 |
bronchoalveolar duct junction | 4.69e-08 | 2 |
alveolar duct | 4.69e-08 | 2 |
bronchiole | 4.69e-08 | 2 |
endocrine system | 2.59e-07 | 45 |
liver | 7.64e-07 | 19 |
digestive gland | 7.64e-07 | 19 |
liver bud | 7.64e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 6.22e-15 | 1 |
signet ring cell adenocarcinoma | 3.56e-08 | 2 |
lung adenocarcinoma | 4.69e-08 | 2 |
pancreas adenocarcinoma | 5.74e-08 | 2 |
pancreatic carcinoma | 5.74e-08 | 2 |
pancreatic ductal adenocarcinoma | 5.74e-08 | 2 |