FFCP PHASE1:Hg19::chr5:77583788..77583798,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:77583788..77583798,- | |||
|coexpression_cluster_id=C432 | |coexpression_cluster_id=C432 | ||
|description=CAGE_peak_at_chr5:77583788..77583798,- | |description=CAGE_peak_at_chr5:77583788..77583798,- | ||
|id=chr5:77583788..77583798,- | |id=chr5:77583788..77583798,- | ||
|ontology_enrichment_celltype=CL:0000860;3.51e-38;33!CL:0002057;3.51e-38;33!CL:0000473;2.11e-25;39!CL:0000234;2.11e-25;39!CL:0000576;2.10e-22;48!CL:0000766;5.29e-14;69!CL:0002087;6.68e-12;104!CL:0000763;8.81e-08;100 | |ontology_enrichment_celltype=CL:0002057!1.59e-37!42;CL:0000860!7.70e-35!45;CL:0002194!1.34e-30!63;CL:0000576!1.34e-30!63;CL:0000040!1.34e-30!63;CL:0000559!1.34e-30!63;CL:0002009!1.42e-29!65;CL:0000766!4.36e-28!76;CL:0000839!2.86e-27!70;CL:0000557!7.58e-27!71;CL:0000763!4.57e-18!112;CL:0000049!4.57e-18!112;CL:0002087!7.94e-15!119;CL:0002031!4.19e-14!124;CL:0000738!8.35e-14!140;CL:0002032!3.27e-11!165;CL:0000837!3.27e-11!165;CL:0000037!1.28e-10!172;CL:0000566!1.28e-10!172;CL:0000988!7.46e-10!182;CL:0002393!6.38e-08!9;CL:0002397!6.38e-08!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;3.51e-38;33!CL:0002057;3.51e-38;33!CL:0000473;2.11e-25;39!CL:0000234;2.11e-25;39!CL:0000576;2.10e-22;48!CL:0000766;5.29e-14;69!CL:0002087;6.68e-12;104!CL:0000763;8.81e-08;100 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000860,5.11e-42,42;CL:0002057,5.11e-42,42;CL:0000473,9.02e-37,48;CL:0000234,9.02e-37,48;CL:0002194,2.04e-29,59;CL:0000576,2.04e-29,59;CL:0000040,2.04e-29,59;CL:0000559,2.04e-29,59;CL:0002009,1.81e-28,61;CL:0000839,2.43e-26,66;CL:0000557,5.95e-26,67;CL:0000766,3.60e-24,72;CL:0000763,3.81e-16,108;CL:0000049,3.81e-16,108;CL:0002087,3.68e-15,115;CL:0002031,1.59e-14,120;CL:0000738,8.37e-13,136;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=CL:0002057;1.30e-27;42 | ||
|ontology_enrichment_disease=DOID:0060085!1.91e-08!1;DOID:3165!1.91e-08!1;DOID:0060121!1.91e-08!1;DOID:2438!1.91e-08!1;DOID:4418!1.91e-08!1;DOID:0060072!2.78e-08!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.65e-23!80;UBERON:0001474!1.14e-21!86;UBERON:0004765!5.20e-18!101;UBERON:0001434!5.20e-18!101;UBERON:0002390!8.35e-18!102;UBERON:0003061!8.35e-18!102;UBERON:0002193!6.05e-16!112;UBERON:0002405!1.90e-15!115;UBERON:0002204!1.54e-12!167;UBERON:0003081!6.76e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.54e-23,76;UBERON:0001474,3.01e-21,82;UBERON:0004765,2.27e-19,90;UBERON:0002405,9.53e-19,93;UBERON:0002390,8.57e-18,98;UBERON:0003061,8.57e-18,98;UBERON:0001434,1.94e-17,100;UBERON:0002193,3.81e-16,108;UBERON:0002204,2.16e-10,167;UBERON:0003081,1.68e-08,203 | |||
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|short_description=p@chr5:77583788..77583798,- | |short_description=p@chr5:77583788..77583798,- | ||
}} | }} |
Latest revision as of 16:32, 30 July 2015
Short description: | p@chr5:77583788..77583798, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:77583788..77583798, - |
Coexpression cluster: | C432_CD14_choriocarcinoma_Peripheral_CD34_Mast_Fibroblast_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.11e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.11e-42 | 42 |
defensive cell | 9.02e-37 | 48 |
phagocyte | 9.02e-37 | 48 |
monopoietic cell | 2.04e-29 | 59 |
monocyte | 2.04e-29 | 59 |
monoblast | 2.04e-29 | 59 |
promonocyte | 2.04e-29 | 59 |
macrophage dendritic cell progenitor | 1.81e-28 | 61 |
myeloid lineage restricted progenitor cell | 2.43e-26 | 66 |
granulocyte monocyte progenitor cell | 5.95e-26 | 67 |
myeloid leukocyte | 3.60e-24 | 72 |
myeloid cell | 3.81e-16 | 108 |
common myeloid progenitor | 3.81e-16 | 108 |
nongranular leukocyte | 3.68e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.59e-14 | 120 |
leukocyte | 8.37e-13 | 136 |
hematopoietic oligopotent progenitor cell | 8.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-11 | 161 |
hematopoietic stem cell | 2.50e-10 | 168 |
hematopoietic cell | 8.62e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.54e-23 | 76 |
bone element | 3.01e-21 | 82 |
skeletal element | 2.27e-19 | 90 |
immune system | 9.53e-19 | 93 |
hematopoietic system | 8.57e-18 | 98 |
blood island | 8.57e-18 | 98 |
skeletal system | 1.94e-17 | 100 |
hemolymphoid system | 3.81e-16 | 108 |
musculoskeletal system | 2.16e-10 | 167 |
lateral plate mesoderm | 1.68e-08 | 203 |