FFCP PHASE1:Hg19::chr6:43970269..43970282,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:43970269..43970282,+ | |||
|description=CAGE_peak_at_chr6:43970269..43970282,+ | |description=CAGE_peak_at_chr6:43970269..43970282,+ | ||
|id=chr6:43970269..43970282,+ | |id=chr6:43970269..43970282,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.37e-21!45;CL:0002057!4.63e-19!42;CL:0002009!9.86e-15!65;CL:0000557!3.09e-14!71;CL:0000766!2.41e-13!76;CL:0002194!2.49e-13!63;CL:0000576!2.49e-13!63;CL:0000040!2.49e-13!63;CL:0000559!2.49e-13!63;CL:0000839!2.55e-13!70;CL:0000738!5.84e-08!140;CL:0000763!1.40e-07!112;CL:0000049!1.40e-07!112;CL:0002031!9.36e-07!124 | |ontology_enrichment_celltype=CL:0000860!1.37e-21!45;CL:0002057!4.63e-19!42;CL:0002009!9.86e-15!65;CL:0000557!3.09e-14!71;CL:0000766!2.41e-13!76;CL:0002194!2.49e-13!63;CL:0000576!2.49e-13!63;CL:0000040!2.49e-13!63;CL:0000559!2.49e-13!63;CL:0000839!2.55e-13!70;CL:0000738!5.84e-08!140;CL:0000763!1.40e-07!112;CL:0000049!1.40e-07!112;CL:0002031!9.36e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.87e-23;33!CL:0002057;4.87e-23;33!CL:0000473;1.78e-15;39!CL:0000234;1.78e-15;39!CL:0000576;4.64e-15;48!CL:0000766;2.01e-09;69!CL:0001014;2.70e-08;2!CL:0001016;2.70e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.10e-28,42;CL:0002057,3.10e-28,42;CL:0000473,4.29e-24,48;CL:0000234,4.29e-24,48;CL:0002009,8.75e-22,61;CL:0000557,2.16e-19,67;CL:0002194,2.61e-18,59;CL:0000576,2.61e-18,59;CL:0000040,2.61e-18,59;CL:0000559,2.61e-18,59;CL:0000766,1.08e-17,72;CL:0000839,6.70e-16,66;CL:0000763,1.40e-12,108;CL:0000049,1.40e-12,108;CL:0000738,5.68e-12,136;CL:0002031,9.76e-11,120;CL:0002087,2.85e-10,115;CL:0000037,1.47e-08,168;CL:0002032,2.61e-08,161;CL:0000837,2.61e-08,161;CL:0001014,3.77e-08,2;CL:0001016,3.77e-08,2;CL:0000988,7.89e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.67e-19;42!UBERON:0008947;1.94e-09;29 | |||
|ontology_enrichment_disease=DOID:305!2.65e-07!106 | |ontology_enrichment_disease=DOID:305!2.65e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:3493;2.70e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.61e-08,2;DOID:305,3.96e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.02e-12!80;UBERON:0001474!4.86e-12!86;UBERON:0001737!2.37e-11!9;UBERON:0002390!1.20e-09!102;UBERON:0003061!1.20e-09!102;UBERON:0004765!2.48e-09!101;UBERON:0001434!2.48e-09!101;UBERON:0002193!1.30e-07!112;UBERON:0002405!1.52e-07!115;UBERON:0000922!4.94e-07!612;UBERON:0000062!6.56e-07!511 | |ontology_enrichment_uberon=UBERON:0002371!1.02e-12!80;UBERON:0001474!4.86e-12!86;UBERON:0001737!2.37e-11!9;UBERON:0002390!1.20e-09!102;UBERON:0003061!1.20e-09!102;UBERON:0004765!2.48e-09!101;UBERON:0001434!2.48e-09!101;UBERON:0002193!1.30e-07!112;UBERON:0002405!1.52e-07!115;UBERON:0000922!4.94e-07!612;UBERON:0000062!6.56e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.31e-27;9!UBERON:0001557;1.31e-27;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.47e-27,9;UBERON:0002371,1.66e-16,76;UBERON:0001474,6.16e-15,82;UBERON:0004765,3.60e-13,90;UBERON:0002390,5.29e-13,98;UBERON:0003061,5.29e-13,98;UBERON:0002405,1.38e-12,93;UBERON:0001557,2.77e-12,19;UBERON:0001434,2.30e-11,100;UBERON:0002193,2.53e-11,108;UBERON:0008947,8.84e-07,38;UBERON:0003258,8.84e-07,38 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0.410623275218653,0.753255837568817,0.305653622991805,0.246301768349837,0.0787107813136792,0.786728553697808,0,1.70297735647684,0,0,0,0,0,0,4.9859586767869,3.20871115952227,1.95309783644267,0,0,0,0.145398238779565,0.377875943688809,0,0,2.46700732813095,1.85823822537062,0,0.512321413058201,0.236482229888585,0.344745680736619,1.29096936716765,1.35426486594342,0.752969358170419,2.72906150057846,1.79778787556068,4.28517449319264,5.1348644332175,3.83602275479425,0,0,0,4.35313857942876,2.8369261234557,5.60540024096017,0.502497330513487,3.65038042894141,0.434377689410233,1.21079900526674,4.78760926783834,2.21523671208619,0.211255286311942,0.425208599930087,0.209658645508376,0.336985893439485,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,1.14681968437569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0.886917589850256,0.263504357079378,0.130979075497713,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0,0,0,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0.339121184620975,0,0,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0.252320850875628,0.72995471815166,0,0,1.38134921352481,0,0.721879481669586,6.50687400219141,4.21461725195254,0.964044119533928,3.639701100169,4.35758888184812,3.79632990577755,4.44943316928543,5.101758093259,4.61696588335668,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,1.44331342025273,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0.553107505625109,0,0,0,0.413536052245775,1.2942852049117,0.74709290462411,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,0.519254429183621,0,0.241718899183244,0,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0.784349769176855,1.46139224653261,0.211103257785751,0,0,0,0,0.541892875087706,0,0.509752546090077,0,2.46262230194396,0.219259876645935,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0.275673144969061,0,0,0.170453254832202,0,0,0,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,1.05650146756755,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0.276283915531148,0,0.306806047506464,0.123084805461069,0,0.179736702294654,0.358042349351218,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0,0,2.06983080686081,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0.569219092059585,0,0,0,0.261177619741208,0.17472666824203,0,0.774050650312681,1.60796497589608,1.06750094169172,0,0,0.225980740780532,0,0,0.126621591911757,0.977756913674015,0.320635281006135,0,0,1.15272333723285,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0.720599767084807,0,0,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0.136203406111576,0.643012593860077,0.825236619583403,0,1.1248694577575,2.32140586367385,0,0,1.10327990218877,0.996637174564964,0.950403028674658,0,0.575745591958336,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0.129282956361551,0,1.19760786519031,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,1.72022758707021,0.332787154610557,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0.889811221596536,0.686520205190771,0.453692771289717,0.15543720058278,0,0,0,0,0.829412415681711,0,0,0.150257608997218,0,0,0.181848659202559,0.214821114084977,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0,0,0,0,2.04993214870357,0.345430341731199,0.607719912354764,0,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0,0.509197589862076,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03499260351932,0,0.781078098613847,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0,0,0.171488009437418,0,0,0,0,0,0,0,0,1.94334832096759,2.38875843943525,2.43020250200632,0.316027223465453,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,2.5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| ||
|short_description=p@chr6:43970269..43970282,+ | |short_description=p@chr6:43970269..43970282,+ | ||
}} | }} |
Latest revision as of 01:53, 31 July 2015
Short description: | p@chr6:43970269..43970282, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:43970269..43970282, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.10e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.10e-28 | 42 |
defensive cell | 4.29e-24 | 48 |
phagocyte | 4.29e-24 | 48 |
macrophage dendritic cell progenitor | 8.75e-22 | 61 |
granulocyte monocyte progenitor cell | 2.16e-19 | 67 |
monopoietic cell | 2.61e-18 | 59 |
monocyte | 2.61e-18 | 59 |
monoblast | 2.61e-18 | 59 |
promonocyte | 2.61e-18 | 59 |
myeloid leukocyte | 1.08e-17 | 72 |
myeloid lineage restricted progenitor cell | 6.70e-16 | 66 |
myeloid cell | 1.40e-12 | 108 |
common myeloid progenitor | 1.40e-12 | 108 |
leukocyte | 5.68e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 9.76e-11 | 120 |
nongranular leukocyte | 2.85e-10 | 115 |
hematopoietic stem cell | 1.47e-08 | 168 |
hematopoietic oligopotent progenitor cell | 2.61e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.61e-08 | 161 |
CD1a-positive Langerhans cell | 3.77e-08 | 2 |
immature CD1a-positive Langerhans cell | 3.77e-08 | 2 |
hematopoietic cell | 7.89e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.47e-27 | 9 |
bone marrow | 1.66e-16 | 76 |
bone element | 6.16e-15 | 82 |
skeletal element | 3.60e-13 | 90 |
hematopoietic system | 5.29e-13 | 98 |
blood island | 5.29e-13 | 98 |
immune system | 1.38e-12 | 93 |
upper respiratory tract | 2.77e-12 | 19 |
skeletal system | 2.30e-11 | 100 |
hemolymphoid system | 2.53e-11 | 108 |
respiratory primordium | 8.84e-07 | 38 |
endoderm of foregut | 8.84e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.61e-08 | 2 |
carcinoma | 3.96e-08 | 106 |