FFCP PHASE1:Hg19::chr6:5054373..5054392,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=264bp_to_AK126470_5end | |association_with_transcript=264bp_to_AK126470_5end | ||
|cluster_id=chr6:5054373..5054392,- | |||
|description=CAGE_peak_1_at_AK126470_5end | |description=CAGE_peak_1_at_AK126470_5end | ||
|id=chr6:5054373..5054392,- | |id=chr6:5054373..5054392,- | ||
|ontology_enrichment_celltype=CL:0002139!5.17e-25!24;CL:0000115!1.40e-23!35;CL:0002078!7.39e-20!44;CL:0005020!1.00e-18!6;CL:0002138!1.00e-18!6;CL:0005022!1.00e-18!6;CL:0000213!3.76e-14!57;CL:0000215!3.76e-14!57;CL:0000071!9.21e-12!18;CL:0002546!9.21e-12!18;CL:0002144!5.14e-10!3;CL:0002618!2.02e-09!3;CL:0002545!4.48e-07!2 | |ontology_enrichment_celltype=CL:0002139!5.17e-25!24;CL:0000115!1.40e-23!35;CL:0002078!7.39e-20!44;CL:0005020!1.00e-18!6;CL:0002138!1.00e-18!6;CL:0005022!1.00e-18!6;CL:0000213!3.76e-14!57;CL:0000215!3.76e-14!57;CL:0000071!9.21e-12!18;CL:0002546!9.21e-12!18;CL:0002144!5.14e-10!3;CL:0002618!2.02e-09!3;CL:0002545!4.48e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002138;2.89e-75;6!CL:0002139;2.27e-19;24!CL:0000115;4.65e-11;36!CL:0002078;1.61e-08;45!CL:0000213;9.47e-07;58!CL:0000215;9.47e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.48e-75,6;CL:0002138,1.48e-75,6;CL:0005022,1.48e-75,6;CL:0002139,1.92e-19,24;CL:0000115,3.75e-13,36;CL:0002078,1.27e-10,45;CL:0000213,2.42e-08,58;CL:0000215,2.42e-08,58 | |||
|ontology_enrichment_development_v019=CL:0005022;2.89e-75;6!UBERON:0006965;1.91e-15;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!3.53e-14!10;UBERON:0002049!4.86e-14!79;UBERON:0007798!4.86e-14!79;UBERON:0001473!7.89e-14!8;UBERON:0004536!7.89e-14!8;UBERON:0006558!7.89e-14!8;UBERON:0000055!8.56e-14!69;UBERON:0001986!9.21e-12!18;UBERON:0004638!9.21e-12!18;UBERON:0004852!9.21e-12!18;UBERON:0001009!7.15e-11!113;UBERON:0004535!2.56e-10!110;UBERON:0007023!2.95e-10!115;UBERON:0001915!5.14e-10!3;UBERON:0001982!5.14e-10!3;UBERON:0000487!2.72e-09!22;UBERON:0006914!5.80e-08!25;UBERON:0004872!7.70e-08!84;UBERON:0001981!1.52e-07!60;UBERON:0007500!1.52e-07!60;UBERON:0004537!1.52e-07!60;UBERON:0006965!1.52e-07!60;UBERON:0000477!3.27e-07!286;UBERON:0005800!4.48e-07!2;UBERON:0001515!4.48e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.13e-56;8!UBERON:0004536;1.13e-56;8!UBERON:0006558;1.13e-56;8!UBERON:0002465;1.67e-45;10!UBERON:0002405;2.76e-17;27!UBERON:0000055;6.99e-12;65!UBERON:0002193;4.62e-11;42!UBERON:0002049;5.77e-08;75!UBERON:0007798;5.77e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,6.87e-57,8;UBERON:0004536,6.87e-57,8;UBERON:0006558,6.87e-57,8;UBERON:0002465,1.12e-45,10;UBERON:0000055,9.13e-11,68;UBERON:0002049,2.01e-09,78;UBERON:0007798,2.01e-09,78;UBERON:0004535,8.22e-07,109 | |||
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| ||
|short_description=p1@AK126470 | |short_description=p1@AK126470 | ||
}} | }} |
Latest revision as of 02:16, 31 July 2015
Short description: | p1@AK126470 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK126470_5end |
Coexpression cluster: | NA |
Association with transcript: | 264bp_to_AK126470_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.48e-75 | 6 |
endothelial cell of lymphatic vessel | 1.48e-75 | 6 |
vascular lymphangioblast | 1.48e-75 | 6 |
endothelial cell of vascular tree | 1.92e-19 | 24 |
endothelial cell | 3.75e-13 | 36 |
meso-epithelial cell | 1.27e-10 | 45 |
lining cell | 2.42e-08 | 58 |
barrier cell | 2.42e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 6.87e-57 | 8 |
lymph vasculature | 6.87e-57 | 8 |
lymphatic part of lymphoid system | 6.87e-57 | 8 |
lymphoid system | 1.12e-45 | 10 |
vessel | 9.13e-11 | 68 |
vasculature | 2.01e-09 | 78 |
vascular system | 2.01e-09 | 78 |
cardiovascular system | 8.22e-07 | 109 |