FFCP PHASE1:Hg19::chr6:53481796..53481815,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:53481796..53481815,-
|short_description=p1@ENST00000502390,p1@ENST00000506206,p1@ENST00000510846
|description=CAGE_peak_1_at_ENST00000502390_5end,CAGE_peak_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000502390,ENST00000506206,ENST00000510846_5end | |||
|cluster_id=chr6:53481796..53481815,- | |||
|coexpression_cluster_id=C4615 | |||
|description=CAGE_peak_1_at_ENST00000502390_5end,CAGE_peak_1_at_ENST00000506206_5end,CAGE_peak_1_at_ENST00000510846_5end | |||
|id=chr6:53481796..53481815,- | |||
|ontology_enrichment_celltype=CL:0000223!1.03e-24!59;CL:0000066!8.38e-22!254;CL:0000181!5.76e-17!12;CL:0000417!5.76e-17!12;CL:0000668!5.76e-17!12;CL:0000414!5.76e-17!12;CL:0000412!5.76e-17!12;CL:0000182!5.76e-17!12;CL:0002076!4.72e-11!43;CL:0002251!4.39e-08!21;CL:0000082!5.58e-08!19 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.48e-22;12!CL:0000082;8.49e-08;19!CL:0000319;1.12e-07;1!CL:0002553;2.23e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.72e-22,12;CL:0000066,1.14e-10,253;CL:0000223,3.05e-08,58;CL:0000082,8.43e-08,19;CL:0000319,1.12e-07,1;CL:0002553,2.37e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.57e-30;30!UBERON:0009497;5.22e-21;13!UBERON:0004161;3.41e-18;11!UBERON:0008947;2.58e-09;29!UBERON:0003104;4.79e-08;31!UBERON:0006595;3.58e-07;86 | |||
|ontology_enrichment_disease=DOID:305!5.12e-32!106;DOID:0050687!1.70e-23!143;DOID:1749!1.52e-14!14;DOID:162!9.60e-14!235;DOID:14566!3.29e-13!239;DOID:0050615!1.57e-12!16;DOID:299!7.04e-11!25;DOID:1324!1.66e-10!15;DOID:7!3.31e-07!39;DOID:3493!9.33e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:0050615;2.94e-13;16!DOID:3493;8.27e-13;2!DOID:1749;8.52e-11;14!DOID:1324;6.01e-10;15!DOID:299;3.47e-08;25!DOID:0050619;9.91e-08;1!DOID:1357;9.91e-08;1!DOID:3030;1.12e-07;1!DOID:3111;2.67e-07;1!DOID:3603;2.67e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.31e-25,106;DOID:0050687,4.63e-19,143;DOID:0050615,2.91e-13,16;DOID:3493,7.13e-13,2;DOID:1749,8.52e-11,14;DOID:162,1.00e-10,235;DOID:14566,2.14e-10,239;DOID:1324,5.96e-10,15;DOID:299,3.35e-08,25;DOID:0050619,9.91e-08,1;DOID:1357,9.91e-08,1;DOID:3030,1.12e-07,1;DOID:3111,2.67e-07,1;DOID:3603,2.67e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001007!6.19e-21!155;UBERON:0001555!6.19e-21!155;UBERON:0007026!6.19e-21!155;UBERON:0004119!2.43e-19!169;UBERON:0000925!2.43e-19!169;UBERON:0006595!2.43e-19!169;UBERON:0000077!6.73e-18!130;UBERON:0004921!8.60e-18!129;UBERON:0004185!8.60e-18!129;UBERON:0005911!9.09e-18!82;UBERON:0001041!1.56e-16!98;UBERON:0009497!1.29e-15!25;UBERON:0000015!1.29e-15!25;UBERON:0002423!1.29e-15!25;UBERON:0006235!1.29e-15!25;UBERON:0004161!1.29e-15!25;UBERON:0005177!1.66e-15!107;UBERON:0000466!2.01e-15!126;UBERON:0000344!3.22e-15!12;UBERON:0007499!3.98e-13!25;UBERON:0008835!6.39e-13!22;UBERON:0003894!6.39e-13!22;UBERON:0009856!1.64e-12!26;UBERON:0002107!1.74e-12!19;UBERON:0006925!1.74e-12!19;UBERON:0008836!1.74e-12!19;UBERON:0009854!3.02e-12!23;UBERON:0003929!3.50e-11!54;UBERON:0009569!4.52e-11!113;UBERON:0005178!2.15e-10!34;UBERON:0002224!2.15e-10!34;UBERON:0005181!5.22e-10!35;UBERON:0002365!9.30e-10!31;UBERON:0002330!9.30e-10!31;UBERON:0005153!4.43e-09!37;UBERON:0001048!1.46e-08!168;UBERON:0005057!1.54e-08!26;UBERON:0001004!1.54e-08!72;UBERON:0002048!1.64e-08!22;UBERON:0000117!1.64e-08!22;UBERON:0000171!1.64e-08!22;UBERON:0000170!1.64e-08!22;UBERON:0005597!1.64e-08!22;UBERON:0000118!1.64e-08!22;UBERON:0003729!1.99e-08!5;UBERON:0004802!5.58e-08!19;UBERON:0000115!5.58e-08!19;UBERON:0000065!1.11e-07!53;UBERON:0008947!1.31e-07!38;UBERON:0003258!1.31e-07!38;UBERON:0000464!1.77e-07!104;UBERON:0003104!2.24e-07!238;UBERON:0009142!2.24e-07!238;UBERON:0005172!2.40e-07!55;UBERON:0005173!2.40e-07!55;UBERON:0000949!4.63e-07!45;UBERON:0002368!5.71e-07!35;UBERON:0000072!7.24e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;2.29e-21;25!UBERON:0002107;3.33e-18;19!UBERON:0006925;3.33e-18;19!UBERON:0002365;1.31e-10;31!UBERON:0002330;1.31e-10;31!UBERON:0002048;2.42e-09;22!UBERON:0000117;2.42e-09;22!UBERON:0000171;2.42e-09;22!UBERON:0000170;2.42e-09;22!UBERON:0002368;9.52e-09;33!UBERON:0004802;8.49e-08;19!UBERON:0000115;8.49e-08;19!UBERON:0001764;9.91e-08;1!UBERON:0001825;9.91e-08;1!UBERON:0000997;1.74e-07;1!UBERON:0005056;1.74e-07;1!UBERON:0004176;1.74e-07;1!UBERON:0002171;3.62e-07;1!UBERON:0006518;3.62e-07;1!UBERON:0008949;3.62e-07;1!UBERON:0000101;3.62e-07;1!UBERON:0002167;3.62e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,2.37e-21,25;UBERON:0000015,2.37e-21,25;UBERON:0002423,2.37e-21,25;UBERON:0006235,2.37e-21,25;UBERON:0004161,2.37e-21,25;UBERON:0008835,7.33e-20,22;UBERON:0003894,7.33e-20,22;UBERON:0009854,6.18e-19,23;UBERON:0002107,3.75e-18,19;UBERON:0006925,3.75e-18,19;UBERON:0008836,3.75e-18,19;UBERON:0001041,5.31e-18,87;UBERON:0007499,2.63e-17,25;UBERON:0009856,1.38e-16,26;UBERON:0005911,6.08e-15,82;UBERON:0005177,4.44e-13,101;UBERON:0004921,3.75e-12,118;UBERON:0001007,7.29e-12,145;UBERON:0001555,7.29e-12,145;UBERON:0007026,7.29e-12,145;UBERON:0009569,1.88e-11,112;UBERON:0002365,1.09e-10,31;UBERON:0002330,1.09e-10,31;UBERON:0004119,2.25e-10,160;UBERON:0000925,2.25e-10,160;UBERON:0006595,2.25e-10,160;UBERON:0002048,2.40e-09,22;UBERON:0000117,2.40e-09,22;UBERON:0000171,2.40e-09,22;UBERON:0000170,2.40e-09,22;UBERON:0005597,2.40e-09,22;UBERON:0000118,2.40e-09,22;UBERON:0002368,2.45e-09,35;UBERON:0003929,5.82e-09,54;UBERON:0005172,7.91e-09,54;UBERON:0005173,7.91e-09,54;UBERON:0001048,4.04e-08,160;UBERON:0005178,8.12e-08,34;UBERON:0002224,8.12e-08,34;UBERON:0004802,8.43e-08,19;UBERON:0000115,8.43e-08,19;UBERON:0002417,8.86e-08,60;UBERON:0000916,8.86e-08,60;UBERON:0001764,9.91e-08,1;UBERON:0001825,9.91e-08,1;UBERON:0005181,1.44e-07,35;UBERON:0000997,1.74e-07,1;UBERON:0005056,1.74e-07,1;UBERON:0002171,3.62e-07,1;UBERON:0006518,3.62e-07,1;UBERON:0008949,3.62e-07,1;UBERON:0000101,3.62e-07,1;UBERON:0002167,3.62e-07,1;UBERON:0000949,5.16e-07,45;UBERON:0008947,6.69e-07,38;UBERON:0003258,6.69e-07,38 | |||
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| ||
|short_description=p1@ENST00000502390,p1@ENST00000506206,p1@ENST00000510846 | |||
}} | }} |
Latest revision as of 02:23, 31 July 2015
Short description: | p1@ENST00000502390, p1@ENST00000506206, p1@ENST00000510846 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000502390_5end, CAGE_peak_1_at_ENST00000506206_5end, CAGE_peak_1_at_ENST00000510846_5end |
Coexpression cluster: | C4615_maxillary_bile_mucinous_small_lung_oral_squamous |
Association with transcript: | 0bp_to_ENST00000502390, ENST00000506206, ENST00000510846_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.72e-22 | 12 |
epithelial cell | 1.14e-10 | 253 |
endodermal cell | 3.05e-08 | 58 |
epithelial cell of lung | 8.43e-08 | 19 |
mucus secreting cell | 1.12e-07 | 1 |
lung fibroblast | 2.37e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.31e-25 | 106 |
cell type cancer | 4.63e-19 | 143 |
respiratory system cancer | 2.91e-13 | 16 |
signet ring cell adenocarcinoma | 7.13e-13 | 2 |
squamous cell carcinoma | 8.52e-11 | 14 |
cancer | 1.00e-10 | 235 |
disease of cellular proliferation | 2.14e-10 | 239 |
lung cancer | 5.96e-10 | 15 |
adenocarcinoma | 3.35e-08 | 25 |
paranasal sinus cancer | 9.91e-08 | 1 |
maxillary sinus cancer | 9.91e-08 | 1 |
mucinous adenocarcinoma | 1.12e-07 | 1 |
cystadenocarcinoma | 2.67e-07 | 1 |
mucinous cystadenocarcinoma | 2.67e-07 | 1 |