FFCP PHASE1:Hg19::chr6:75834940..75834995,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:75834940..75834995,- | |||
|coexpression_cluster_id=C259 | |||
|description=CAGE_peak_at_chr6:75834940..75834995,- | |description=CAGE_peak_at_chr6:75834940..75834995,- | ||
|id=chr6:75834940..75834995,- | |id=chr6:75834940..75834995,- | ||
|ontology_enrichment_celltype=CL:0000057!2.43e-15!75;CL:0002620!1.38e-11!23;CL:0000055!9.80e-10!180;CL:0002334!1.56e-07!12 | |ontology_enrichment_celltype=CL:0000057!2.43e-15!75;CL:0002620!1.38e-11!23;CL:0000055!9.80e-10!180;CL:0002334!1.56e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.19e-12;23!CL:0002334;1.57e-11;12!CL:0000499;1.73e-11;28!CL:0000153;1.12e-10;9!CL:0000447;1.12e-10;9!CL:0000136;1.92e-10;13!CL:0002580;3.87e-10;3!CL:0002615;1.01e-09;3!CL:0002579;1.25e-09;3!CL:0000135;1.73e-09;3!CL:0000388;1.73e-09;3!CL:0002504;1.88e-08;3!CL:1000279;1.88e-08;3!CL:1000280;1.88e-08;3!CL:0000327;4.60e-08;15!CL:0000138;1.39e-07;6!CL:0002617;2.94e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.22e-19,76;CL:0000136,3.50e-14,15;CL:0002620,1.72e-12,23;CL:0002334,1.58e-11,12;CL:0000499,1.62e-11,28;CL:0000153,1.25e-10,9;CL:0000447,1.25e-10,9;CL:0000134,3.36e-10,354;CL:0002580,3.95e-10,3;CL:0002320,9.45e-10,361;CL:0002615,9.69e-10,3;CL:0002579,1.22e-09,3;CL:0000135,2.20e-09,3;CL:0000388,2.20e-09,3;CL:0000048,5.35e-09,427;CL:0000723,1.11e-08,433;CL:0002504,2.58e-08,3;CL:1000279,2.58e-08,3;CL:1000280,2.58e-08,3;CL:0000034,2.84e-08,441;CL:0000219,3.48e-08,386;CL:0000327,4.19e-08,15;CL:0000058,1.63e-07,6;CL:0000138,1.63e-07,6;CL:0002617,2.78e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;1.47e-09;5!DOID:450;1.47e-09;5!DOID:66;1.47e-09;5!DOID:423;1.47e-09;5!DOID:0080000;1.47e-09;5!DOID:11722;1.47e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.48e-09,5;DOID:450,1.48e-09,5;DOID:66,1.48e-09,5;DOID:423,1.48e-09,5;DOID:0080000,1.48e-09,5;DOID:11722,1.48e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!7.98e-09!95;UBERON:0002097!8.02e-09!40;UBERON:0002199!1.29e-08!45;UBERON:0002416!1.29e-08!45;UBERON:0003688!1.25e-07!6;UBERON:0002358!1.25e-07!6;UBERON:0003684!1.25e-07!6;UBERON:0001178!1.25e-07!6 | |ontology_enrichment_uberon=UBERON:0003102!7.98e-09!95;UBERON:0002097!8.02e-09!40;UBERON:0002199!1.29e-08!45;UBERON:0002416!1.29e-08!45;UBERON:0003688!1.25e-07!6;UBERON:0002358!1.25e-07!6;UBERON:0003684!1.25e-07!6;UBERON:0001178!1.25e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.88e-20;9!UBERON:0000042;5.88e-20;9!UBERON:0003688;1.20e-17;6!UBERON:0002358;1.20e-17;6!UBERON:0003684;1.20e-17;6!UBERON:0001178;1.20e-17;6!UBERON:0007846;1.73e-09;3!UBERON:0000043;1.73e-09;3!UBERON:0007845;1.73e-09;3!UBERON:0001443;2.50e-09;11!UBERON:0000310;1.36e-07;10!UBERON:0005406;4.83e-07;2!UBERON:0002384;5.39e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.13e-17,6;UBERON:0002358,1.13e-17,6;UBERON:0003684,1.13e-17,6;UBERON:0001178,1.13e-17,6;UBERON:0004457,1.32e-14,12;UBERON:0000042,1.32e-14,12;UBERON:0002384,8.16e-10,371;UBERON:0001443,2.11e-09,11;UBERON:0007846,2.20e-09,3;UBERON:0000043,2.20e-09,3;UBERON:0007845,2.20e-09,3;UBERON:0002199,1.65e-08,46;UBERON:0002416,1.65e-08,46;UBERON:0002097,1.89e-08,41;UBERON:0000310,1.34e-07,10;UBERON:0005406,4.85e-07,2 | |||
|phase1_expression=7.99384868790449,21.8382534368803,4.79244973926302,6.00439790118782,6.25745532198203,7.85104671690332,2.53299878168311,0,0.261185628199839,0,0,0.218441372130172,0,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,1.50401373190767,8.98048417557107,0,4.37971383272372,0.189069634328136,0.443458794925128,0.263504357079378,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4666914686485,0.12663051166458,0.132409180813219,0.573673241497627,1.06400514659507,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0.149448680551801,0.469737994575059,0.323745888736263,0,0.61246251376468,0.368502951935304,0.206651562351531,1.18800285728205,3.95627086845691,0,0.718618141816238,0.168336113954066,0,0,0,1.5324389789951,1.05166641234618,0,4.48474089222155,7.47450860864986,2.96704661623387,2.10063767259082,0.824420233907511,7.47157566132325,3.90845398296339,1.18143432568886,0.974370051611986,1.7670364197088,2.66944706062668,1.61646056818812,3.90510551768276,0.906768884048762,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0.721879481669586,0,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.402115889646523,0,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0.43596006883328,0.07333828582095,1.03417372606222,0,0,0.797814349754612,0,0,0,0,0.857867961948885,2.71310802695722,0,0,0,1.58390374586686,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0.271265023699736,1.03985430765404,2.3195768543631,0.788512075169673,1.05427273493442,0.300946099727719,2.27407504055985,0,0,0.553107505625109,0.0868836144680828,0,0,0,0,0,0,0,0.604780586659361,9.6762045049323,9.05425642399569,21.3301671769136,2.56278298511402,5.11707249066703,16.7288077989352,4.45254199334973,0,0,0.164254312027618,0.519254429183621,0.232420756919918,0,1.20303882181971,0.184161977871793,0.459257792658427,0.546273504020151,1.18011973463482,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0,0,1.30012049207304,0,0,0,0,0,0.322260734604821,0.435050081742686,0.0852266274161009,0.534192213880424,0,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,1.43897966066652,2.19629623788844,1.17812402345686,0,0,0.421258456238981,0,0,0,0.682499557039929,2.40389234321312,0,0,0,0,0.578775534266688,1.31178950409327,0.202910376962704,0,0.281695602532241,0,0.392996164052485,0,0,3.37772216476263,2.63435914367922,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.593929361665277,1.22864280839693,0,0,0.111308705022906,0.16480387422676,0,0,0,0,0.306806047506464,0,0.622079175323615,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,2.62066728448103,0,0,0,0.31900115973192,1.19076871422421,0,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0,0,0,0.176915129006678,1.22206028986725,0,0,0,0,1.60515529459758,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.52418000472609,0.171986032471617,0.290268993867255,0.146178634172371,0,0.193978032976839,0,1.12990370390266,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0,1.39866726707491,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0.859530882839914,0,0,0,0,0.399358000997982,0,0.223171457441873,0.335917362433631,1.80149941771202,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,2.5426853765475,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.298509605773748,0.467426619694449,0,0.568209015825267,2.51567901752575,0.889811221596536,0,0,0.310874401165561,0.147855149989634,0.477890301491107,0,0.621051827505038,0,0.797525143673985,1.5652351854352,0.601030435988874,0.761610424337591,0,0.181848659202559,0.214821114084977,0,1.59238355479446,0.400027764663154,1.37358282073117,1.6837474438296,0,0,0.428883182749851,0.260994291965212,0.226705925512272,0,0.244736704506468,0.71635536432595,0,0.657852148736121,0.176689145945881,0,0,0,0.690860683462397,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,5.5124185923576,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0.818859587550484,0,0.0675375846183947,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| ||
|short_description=p@chr6:75834940..75834995,- | |short_description=p@chr6:75834940..75834995,- | ||
}} | }} |
Latest revision as of 03:13, 31 July 2015
Short description: | p@chr6:75834940..75834995, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:75834940..75834995, - |
Coexpression cluster: | C259_Preadipocyte_Adipocyte_Fibroblast_Chondrocyte_tenocyte_normal_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.22e-19 | 76 |
fat cell | 3.50e-14 | 15 |
skin fibroblast | 1.72e-12 | 23 |
preadipocyte | 1.58e-11 | 12 |
stromal cell | 1.62e-11 | 28 |
GAG secreting cell | 1.25e-10 | 9 |
carbohydrate secreting cell | 1.25e-10 | 9 |
mesenchymal cell | 3.36e-10 | 354 |
preadipocyte of the breast | 3.95e-10 | 3 |
connective tissue cell | 9.45e-10 | 361 |
adipocyte of omentum tissue | 9.69e-10 | 3 |
omentum preadipocyte | 1.22e-09 | 3 |
fibrocyte | 2.20e-09 | 3 |
tendon cell | 2.20e-09 | 3 |
multi fate stem cell | 5.35e-09 | 427 |
somatic stem cell | 1.11e-08 | 433 |
enteric smooth muscle cell | 2.58e-08 | 3 |
smooth muscle cell of large intestine | 2.58e-08 | 3 |
smooth muscle cell of colon | 2.58e-08 | 3 |
stem cell | 2.84e-08 | 441 |
motile cell | 3.48e-08 | 386 |
extracellular matrix secreting cell | 4.19e-08 | 15 |
chondroblast | 1.63e-07 | 6 |
chondrocyte | 1.63e-07 | 6 |
adipocyte of breast | 2.78e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.13e-17 | 6 |
peritoneum | 1.13e-17 | 6 |
abdominal cavity | 1.13e-17 | 6 |
visceral peritoneum | 1.13e-17 | 6 |
cavity lining | 1.32e-14 | 12 |
serous membrane | 1.32e-14 | 12 |
connective tissue | 8.16e-10 | 371 |
chest | 2.11e-09 | 11 |
dense regular connective tissue | 2.20e-09 | 3 |
tendon | 2.20e-09 | 3 |
regular connective tissue | 2.20e-09 | 3 |
integument | 1.65e-08 | 46 |
integumental system | 1.65e-08 | 46 |
skin of body | 1.89e-08 | 41 |
breast | 1.34e-07 | 10 |
perirenal fat | 4.85e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.48e-09 | 5 |
myotonic disease | 1.48e-09 | 5 |
muscle tissue disease | 1.48e-09 | 5 |
myopathy | 1.48e-09 | 5 |
muscular disease | 1.48e-09 | 5 |
myotonic dystrophy | 1.48e-09 | 5 |