FFCP PHASE1:Hg19::chr6:75899015..75899053,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:75899015..75899053,- | |||
|coexpression_cluster_id=C259 | |||
|description=CAGE_peak_at_chr6:75899015..75899053,- | |description=CAGE_peak_at_chr6:75899015..75899053,- | ||
|id=chr6:75899015..75899053,- | |id=chr6:75899015..75899053,- | ||
|ontology_enrichment_celltype=CL:0000057!1.97e-19!75;CL:0000055!1.34e-15!180;CL:0002334!8.64e-11!12;CL:0000499!1.73e-09!27;CL:0002620!1.98e-09!23;CL:0000048!1.91e-08!430;CL:0000723!3.67e-08!436;CL:0002320!9.05e-08!365;CL:0000034!2.17e-07!444;CL:0000136!6.34e-07!15 | |ontology_enrichment_celltype=CL:0000057!1.97e-19!75;CL:0000055!1.34e-15!180;CL:0002334!8.64e-11!12;CL:0000499!1.73e-09!27;CL:0002620!1.98e-09!23;CL:0000048!1.91e-08!430;CL:0000723!3.67e-08!436;CL:0002320!9.05e-08!365;CL:0000034!2.17e-07!444;CL:0000136!6.34e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.98e-16;23!CL:0002334;5.52e-14;12!CL:0000153;7.73e-14;9!CL:0000447;7.73e-14;9!CL:0000499;4.41e-11;28!CL:0000138;4.64e-11;6!CL:0000327;4.68e-10;15!CL:0000057;7.01e-10;73!CL:0002580;1.26e-09;3!CL:0002615;1.64e-09;3!CL:0000135;3.04e-09;3!CL:0000388;3.04e-09;3!CL:0002579;3.78e-09;3!CL:0002570;6.60e-08;8!CL:0002504;7.96e-08;3!CL:1000279;7.96e-08;3!CL:1000280;7.96e-08;3!CL:0000136;1.38e-07;13!CL:0000197;1.93e-07;6!CL:0000098;1.93e-07;6!CL:0002167;1.93e-07;6!CL:0002617;6.12e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.57e-25,76;CL:0002620,1.71e-16,23;CL:0000153,7.05e-14,9;CL:0000447,7.05e-14,9;CL:0002334,7.72e-14,12;CL:0002320,9.59e-12,361;CL:0000499,4.93e-11,28;CL:0000058,5.09e-11,6;CL:0000138,5.09e-11,6;CL:0000134,6.85e-11,354;CL:0000136,8.86e-11,15;CL:0000327,5.09e-10,15;CL:0002580,1.28e-09,3;CL:0002615,1.74e-09,3;CL:0000048,1.84e-09,427;CL:0000135,2.78e-09,3;CL:0000388,2.78e-09,3;CL:0000723,3.96e-09,433;CL:0002579,4.07e-09,3;CL:0000219,9.49e-09,386;CL:0000034,1.06e-08,441;CL:0002504,4.98e-08,3;CL:1000279,4.98e-08,3;CL:1000280,4.98e-08,3;CL:0002570,7.77e-08,8;CL:0000197,1.44e-07,6;CL:0000098,1.44e-07,6;CL:0002167,1.44e-07,6;CL:0002617,6.14e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.32e-12;5!DOID:450;1.32e-12;5!DOID:66;1.32e-12;5!DOID:423;1.32e-12;5!DOID:0080000;1.32e-12;5!DOID:11722;1.32e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.60e-13,5;DOID:450,9.60e-13,5;DOID:66,9.60e-13,5;DOID:423,9.60e-13,5;DOID:0080000,9.60e-13,5;DOID:11722,9.60e-13,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.77e-09!95;UBERON:0002384!9.81e-08!375;UBERON:0003688!1.27e-07!6;UBERON:0002358!1.27e-07!6;UBERON:0003684!1.27e-07!6;UBERON:0001178!1.27e-07!6;UBERON:0002199!6.21e-07!45;UBERON:0002416!6.21e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.96e-19;9!UBERON:0000042;3.96e-19;9!UBERON:0003688;5.89e-17;6!UBERON:0002358;5.89e-17;6!UBERON:0003684;5.89e-17;6!UBERON:0001178;5.89e-17;6!UBERON:0007846;3.04e-09;3!UBERON:0000043;3.04e-09;3!UBERON:0007845;3.04e-09;3!UBERON:0001013;1.48e-08;14!UBERON:0000310;3.47e-07;10!UBERON:0005406;4.11e-07;2!UBERON:0002384;4.14e-07;198!UBERON:0002097;5.42e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.72e-17,6;UBERON:0002358,6.72e-17,6;UBERON:0003684,6.72e-17,6;UBERON:0001178,6.72e-17,6;UBERON:0004457,5.66e-14,12;UBERON:0000042,5.66e-14,12;UBERON:0002384,8.78e-12,371;UBERON:0002097,2.52e-09,41;UBERON:0007846,2.78e-09,3;UBERON:0000043,2.78e-09,3;UBERON:0007845,2.78e-09,3;UBERON:0001013,1.69e-08,14;UBERON:0002199,5.82e-08,46;UBERON:0002416,5.82e-08,46;UBERON:0000310,3.51e-07,10;UBERON:0005406,4.12e-07,2 | |||
|phase1_expression=4.36028110249336,10.2768251467672,3.24195129420734,16.0117277365009,5.81049422755474,14.8297549097063,0,0,0.522371256399677,0,0,0,0,0.618831764800233,1.32558950291166,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,3.00802746381534,8.40109809972778,1.5905718941022,3.89307896242109,0.378139268656271,0.886917589850256,0.614843499851882,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,4.47274756525787,0,0.264818361626438,0,0.709336764396714,1.12135520028461,1.06748995729705,0,0,0,0.163461903113459,0,0,0,0,0,0,0.352303495931295,0.161872944368132,0,0.204154171254893,0.245668634623536,0.103325781175765,1.18800285728205,3.95627086845691,0,0,0,0.500474079487857,0.277064115484183,0.438977620880838,1.22595118319608,1.05166641234618,0.226864366320042,1.97328599257748,3.41691822109708,2.11931901159562,1.20036438433761,1.54578793857658,7.9868567414145,4.09457083929498,1.35021065793013,1.65642908774038,3.5340728394176,1.84099797284599,2.26304479546337,4.61512470271599,0.806016785821122,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,2.57296375277154,0,0.464367928031979,0.721879481669586,0.591534000199219,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.301586917234893,0,0.325808305310325,0,0,0,0.234817388471643,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.517086863031111,3.57656445851882,0,0.797814349754612,0,0,0,0,0.57191197463259,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71768088406796,0.500170521059677,0.271265023699736,3.11956292296211,9.63516539504674,2.99634588564476,1.87426263988341,0.601892199455438,0,0,0.664225598535437,0.368738337083406,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,4.21783273291921,6.29194090481056,15.155645099386,2.05022638809122,3.58195074346692,9.65123526861645,11.8734453155993,0.308419387605311,0.355123450626254,0.0821271560138091,1.03850885836724,0.348631135379878,0,0.40101294060657,0.0920809889358963,0.229628896329213,0.546273504020151,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457847324091717,0.495056999523528,0,0,0,0.096670718292122,0.462145851343933,0.307007349452259,0.275673144969061,0.107420244868274,0.725083469571143,0.340906509664404,0.534192213880424,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0.855877976067841,0,0,1.61885211824983,1.64722217841633,1.29593642580255,0.202182481573316,0,0,0,0.487426979262569,1.05650146756755,0.545999645631943,2.12108147930569,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.294747123039363,0,0,3.58882980006029,2.96365403663912,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,2.07875276582847,0.307160702099232,0,0,0.333926115068718,0,0,0.796991953004279,0,0,0.306806047506464,0,0.933118762985422,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,1.48124672601102,0,0.179515288819544,0,0.31900115973192,1.28236630762607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.277349346026277,0.520679215005393,0,0,0.17472666824203,0,0.580537987734511,0.219267951258557,0.328461828212837,0.0969890164884194,0,0.677942222341597,0,0.19871461170299,0.0633107959558787,0,0.0801588202515337,0,1.59847687665704,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0,0,1.71906176567983,0,0,0.229160424011684,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.034148301238,0,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,1.40227985908335,2.21922344601045,0.757612021100357,3.0188148210309,0.889811221596536,0.228840068396924,0.907385542579434,0.15543720058278,0.147855149989634,0.318593534327405,0,0.465788870628778,0.414706207840855,1.06336685823198,0.521745061811734,1.20206087197775,0,0,0.909243296012797,0.751873899297419,0.464033759878494,1.99047944349308,0,2.40376993627955,1.01024846629776,0,0,0.214441591374926,0.260994291965212,0,0.231522474323834,0.244736704506468,0.895444205407437,0.308801447160972,0.438568099157414,0.176689145945881,0.192914038270915,0.675769762612291,0,0.345430341731199,1.21543982470953,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0.212574920101683,0,0,0.954013051960256,0,0,0.705351887381368,3.3687002508852,0,0,0.1596338590571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| ||
|short_description=p@chr6:75899015..75899053,- | |short_description=p@chr6:75899015..75899053,- | ||
}} | }} |
Latest revision as of 03:15, 31 July 2015
Short description: | p@chr6:75899015..75899053, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:75899015..75899053, - |
Coexpression cluster: | C259_Preadipocyte_Adipocyte_Fibroblast_Chondrocyte_tenocyte_normal_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.57e-25 | 76 |
skin fibroblast | 1.71e-16 | 23 |
GAG secreting cell | 7.05e-14 | 9 |
carbohydrate secreting cell | 7.05e-14 | 9 |
preadipocyte | 7.72e-14 | 12 |
connective tissue cell | 9.59e-12 | 361 |
stromal cell | 4.93e-11 | 28 |
chondroblast | 5.09e-11 | 6 |
chondrocyte | 5.09e-11 | 6 |
mesenchymal cell | 6.85e-11 | 354 |
fat cell | 8.86e-11 | 15 |
extracellular matrix secreting cell | 5.09e-10 | 15 |
preadipocyte of the breast | 1.28e-09 | 3 |
adipocyte of omentum tissue | 1.74e-09 | 3 |
multi fate stem cell | 1.84e-09 | 427 |
fibrocyte | 2.78e-09 | 3 |
tendon cell | 2.78e-09 | 3 |
somatic stem cell | 3.96e-09 | 433 |
omentum preadipocyte | 4.07e-09 | 3 |
motile cell | 9.49e-09 | 386 |
stem cell | 1.06e-08 | 441 |
enteric smooth muscle cell | 4.98e-08 | 3 |
smooth muscle cell of large intestine | 4.98e-08 | 3 |
smooth muscle cell of colon | 4.98e-08 | 3 |
mesenchymal stem cell of adipose | 7.77e-08 | 8 |
receptor cell | 1.44e-07 | 6 |
sensory epithelial cell | 1.44e-07 | 6 |
olfactory epithelial cell | 1.44e-07 | 6 |
adipocyte of breast | 6.14e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.72e-17 | 6 |
peritoneum | 6.72e-17 | 6 |
abdominal cavity | 6.72e-17 | 6 |
visceral peritoneum | 6.72e-17 | 6 |
cavity lining | 5.66e-14 | 12 |
serous membrane | 5.66e-14 | 12 |
connective tissue | 8.78e-12 | 371 |
skin of body | 2.52e-09 | 41 |
dense regular connective tissue | 2.78e-09 | 3 |
tendon | 2.78e-09 | 3 |
regular connective tissue | 2.78e-09 | 3 |
adipose tissue | 1.69e-08 | 14 |
integument | 5.82e-08 | 46 |
integumental system | 5.82e-08 | 46 |
breast | 3.51e-07 | 10 |
perirenal fat | 4.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.60e-13 | 5 |
myotonic disease | 9.60e-13 | 5 |
muscle tissue disease | 9.60e-13 | 5 |
myopathy | 9.60e-13 | 5 |
muscular disease | 9.60e-13 | 5 |
myotonic dystrophy | 9.60e-13 | 5 |