FFCP PHASE1:Hg19::chr7:124822100..124822124,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:124822100..124822124,- | |||
|description=CAGE_peak_at_chr7:124822100..124822124,- | |description=CAGE_peak_at_chr7:124822100..124822124,- | ||
|id=chr7:124822100..124822124,- | |id=chr7:124822100..124822124,- | ||
|ontology_enrichment_celltype=CL:0000039!6.93e-10!7;CL:0000586!6.93e-10!7;CL:1000415!1.24e-09!2;CL:0002076!8.44e-08!43;CL:0000066!9.38e-08!254 | |ontology_enrichment_celltype=CL:0000039!6.93e-10!7;CL:0000586!6.93e-10!7;CL:1000415!1.24e-09!2;CL:0002076!8.44e-08!43;CL:0000066!9.38e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0002553;4.72e-15;1!CL:0000313;6.21e-15;1!CL:0000039;1.62e-08;7!CL:0000586;1.62e-08;7!CL:0000159;4.09e-08;2!CL:1000415;5.01e-08;2!CL:0000082;7.19e-07;19 | |ontology_enrichment_celltype_v019=CL:0002553;4.72e-15;1!CL:0000313;6.21e-15;1!CL:0000039;1.62e-08;7!CL:0000586;1.62e-08;7!CL:0000159;4.09e-08;2!CL:1000415;5.01e-08;2!CL:0000082;7.19e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0002553,4.73e-15,1;CL:0000313,6.22e-15,1;CL:0000039,1.85e-08,7;CL:0000586,1.85e-08,7;CL:0000159,4.09e-08,2;CL:1000415,5.02e-08,2;CL:0000082,6.91e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.25e-12;10!UBERON:0005564;1.25e-12;10 | |ontology_enrichment_development_v019=UBERON:0009117;1.25e-12;10!UBERON:0005564;1.25e-12;10 | ||
|ontology_enrichment_disease=DOID:305!2.29e-22!106;DOID:14566!6.20e-20!239;DOID:162!2.69e-19!235;DOID:0050687!3.31e-16!143;DOID:0050686!7.59e-14!137;DOID:5093!5.55e-10!4;DOID:1612!5.55e-10!4;DOID:299!1.36e-09!25;DOID:1749!3.83e-07!14 | |ontology_enrichment_disease=DOID:305!2.29e-22!106;DOID:14566!6.20e-20!239;DOID:162!2.69e-19!235;DOID:0050687!3.31e-16!143;DOID:0050686!7.59e-14!137;DOID:5093!5.55e-10!4;DOID:1612!5.55e-10!4;DOID:299!1.36e-09!25;DOID:1749!3.83e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:4960;5.42e-15;1!DOID:0070004;5.42e-15;1!DOID:2152;6.21e-15;1!DOID:305;7.40e-11;106!DOID:1324;1.44e-08;15!DOID:1325;1.99e-08;7!DOID:3904;1.99e-08;7!DOID:0050615;4.59e-08;16!DOID:3910;7.27e-08;2!DOID:3493;7.27e-08;2!DOID:193;1.32e-07;29!DOID:3905;9.64e-07;9 | |ontology_enrichment_disease_v019=DOID:4960;5.42e-15;1!DOID:0070004;5.42e-15;1!DOID:2152;6.21e-15;1!DOID:305;7.40e-11;106!DOID:1324;1.44e-08;15!DOID:1325;1.99e-08;7!DOID:3904;1.99e-08;7!DOID:0050615;4.59e-08;16!DOID:3910;7.27e-08;2!DOID:3493;7.27e-08;2!DOID:193;1.32e-07;29!DOID:3905;9.64e-07;9 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.21e-16,106;DOID:4960,5.42e-15,1;DOID:0070004,5.42e-15,1;DOID:2152,6.22e-15,1;DOID:0050687,5.60e-12,143;DOID:162,4.21e-11,235;DOID:14566,7.75e-11,239;DOID:1324,1.37e-08,15;DOID:0050686,1.75e-08,137;DOID:1325,1.85e-08,7;DOID:3904,1.85e-08,7;DOID:0050615,4.38e-08,16;DOID:3910,6.58e-08,2;DOID:3493,7.52e-08,2;DOID:193,1.32e-07,29;DOID:3905,9.10e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.19e-08!8;UBERON:0003133!8.03e-07!48 | |ontology_enrichment_uberon=UBERON:0000473!1.19e-08!8;UBERON:0003133!8.03e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;6.21e-15;1!UBERON:0003133;2.26e-08;44!UBERON:0004909;4.09e-08;2!UBERON:0006562;5.01e-08;2!UBERON:0004903;7.27e-08;2!UBERON:0002173;7.27e-08;2!UBERON:0002186;7.27e-08;2!UBERON:0000473;1.47e-07;8!UBERON:0004802;7.19e-07;19!UBERON:0000115;7.19e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0004911;6.21e-15;1!UBERON:0003133;2.26e-08;44!UBERON:0004909;4.09e-08;2!UBERON:0006562;5.01e-08;2!UBERON:0004903;7.27e-08;2!UBERON:0002173;7.27e-08;2!UBERON:0002186;7.27e-08;2!UBERON:0000473;1.47e-07;8!UBERON:0004802;7.19e-07;19!UBERON:0000115;7.19e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,6.22e-15,1;UBERON:0004909,4.09e-08,2;UBERON:0004903,6.58e-08,2;UBERON:0002173,6.58e-08,2;UBERON:0002186,6.58e-08,2;UBERON:0000473,1.65e-07,8;UBERON:0003133,6.78e-07,48;UBERON:0004802,6.91e-07,19;UBERON:0000115,6.91e-07,19 | |||
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| ||
|short_description=p@chr7:124822100..124822124,- | |short_description=p@chr7:124822100..124822124,- | ||
}} | }} |
Latest revision as of 05:39, 31 July 2015
Short description: | p@chr7:124822100..124822124, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:124822100..124822124, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 4.73e-15 | 1 |
serous secreting cell | 6.22e-15 | 1 |
germ line cell | 1.85e-08 | 7 |
germ cell | 1.85e-08 | 7 |
seromucus secreting cell | 4.09e-08 | 2 |
epithelial cell of gall bladder | 5.02e-08 | 2 |
epithelial cell of lung | 6.91e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 6.22e-15 | 1 |
epithelium of gonad | 4.09e-08 | 2 |
bronchoalveolar duct junction | 6.58e-08 | 2 |
alveolar duct | 6.58e-08 | 2 |
bronchiole | 6.58e-08 | 2 |
testis | 1.65e-07 | 8 |
reproductive organ | 6.78e-07 | 48 |
respiratory tract epithelium | 6.91e-07 | 19 |
lung epithelium | 6.91e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.21e-16 | 106 |
bone marrow cancer | 5.42e-15 | 1 |
myeloma | 5.42e-15 | 1 |
ovary epithelial cancer | 6.22e-15 | 1 |
cell type cancer | 5.60e-12 | 143 |
cancer | 4.21e-11 | 235 |
disease of cellular proliferation | 7.75e-11 | 239 |
lung cancer | 1.37e-08 | 15 |
organ system cancer | 1.75e-08 | 137 |
bronchus cancer | 1.85e-08 | 7 |
bronchogenic carcinoma | 1.85e-08 | 7 |
respiratory system cancer | 4.38e-08 | 16 |
lung adenocarcinoma | 6.58e-08 | 2 |
signet ring cell adenocarcinoma | 7.52e-08 | 2 |
reproductive organ cancer | 1.32e-07 | 29 |
lung carcinoma | 9.10e-07 | 9 |