FFCP PHASE1:Hg19::chr7:39018373..39018384,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:39018373..39018384,+ | |||
|coexpression_cluster_id=C4536 | |coexpression_cluster_id=C4536 | ||
|description=CAGE_peak_at_chr7:39018373..39018384,+ | |description=CAGE_peak_at_chr7:39018373..39018384,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.03e-08;82 | |ontology_enrichment_development_v019=UBERON:0006601;7.03e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!6.00e-59!22;UBERON:0001950!3.67e-58!20;UBERON:0001869!1.70e-54!32;UBERON:0000956!1.24e-51!25;UBERON:0000203!1.24e-51!25;UBERON:0001893!4.39e-51!34;UBERON:0002020!8.87e-51!34;UBERON:0003528!8.87e-51!34;UBERON:0002791!1.39e-47!33;UBERON:0002780!5.82e-46!41;UBERON:0001890!5.82e-46!41;UBERON:0006240!5.82e-46!41;UBERON:0003080!9.14e-45!42;UBERON:0001049!3.45e-38!57;UBERON:0005068!3.45e-38!57;UBERON:0006241!3.45e-38!57;UBERON:0007135!3.45e-38!57;UBERON:0002616!1.02e-36!59;UBERON:0000955!4.64e-36!69;UBERON:0006238!4.64e-36!69;UBERON:0005743!2.40e-35!86;UBERON:0003056!3.52e-35!61;UBERON:0001017!1.14e-34!82;UBERON:0003075!7.38e-33!86;UBERON:0007284!7.38e-33!86;UBERON:0007023!1.86e-31!115;UBERON:0000073!2.00e-31!94;UBERON:0001016!2.00e-31!94;UBERON:0002346!4.04e-31!90;UBERON:0000200!1.20e-26!6;UBERON:0000033!9.28e-23!123;UBERON:0002021!9.73e-23!5;UBERON:0000153!2.11e-21!129;UBERON:0007811!2.11e-21!129;UBERON:0004121!2.30e-17!169;UBERON:0000924!8.30e-17!173;UBERON:0006601!8.30e-17!173;UBERON:0001872!5.42e-15!5;UBERON:0002771!7.29e-14!3;UBERON:0001871!1.63e-13!7;UBERON:0000025!3.77e-11!194;UBERON:0001870!2.02e-10!2;UBERON:0004111!2.43e-10!241;UBERON:0000064!5.79e-10!219;UBERON:0000483!1.91e-09!309;UBERON:0002360!1.93e-09!2;UBERON:0000094!1.93e-09!2;UBERON:0007645!1.93e-09!2;UBERON:0000119!2.79e-09!312;UBERON:0000477!3.65e-09!286;UBERON:0000475!5.39e-09!365;UBERON:0000481!1.61e-07!347;UBERON:0000062!1.62e-07!511 | |ontology_enrichment_uberon=UBERON:0002619!6.00e-59!22;UBERON:0001950!3.67e-58!20;UBERON:0001869!1.70e-54!32;UBERON:0000956!1.24e-51!25;UBERON:0000203!1.24e-51!25;UBERON:0001893!4.39e-51!34;UBERON:0002020!8.87e-51!34;UBERON:0003528!8.87e-51!34;UBERON:0002791!1.39e-47!33;UBERON:0002780!5.82e-46!41;UBERON:0001890!5.82e-46!41;UBERON:0006240!5.82e-46!41;UBERON:0003080!9.14e-45!42;UBERON:0001049!3.45e-38!57;UBERON:0005068!3.45e-38!57;UBERON:0006241!3.45e-38!57;UBERON:0007135!3.45e-38!57;UBERON:0002616!1.02e-36!59;UBERON:0000955!4.64e-36!69;UBERON:0006238!4.64e-36!69;UBERON:0005743!2.40e-35!86;UBERON:0003056!3.52e-35!61;UBERON:0001017!1.14e-34!82;UBERON:0003075!7.38e-33!86;UBERON:0007284!7.38e-33!86;UBERON:0007023!1.86e-31!115;UBERON:0000073!2.00e-31!94;UBERON:0001016!2.00e-31!94;UBERON:0002346!4.04e-31!90;UBERON:0000200!1.20e-26!6;UBERON:0000033!9.28e-23!123;UBERON:0002021!9.73e-23!5;UBERON:0000153!2.11e-21!129;UBERON:0007811!2.11e-21!129;UBERON:0004121!2.30e-17!169;UBERON:0000924!8.30e-17!173;UBERON:0006601!8.30e-17!173;UBERON:0001872!5.42e-15!5;UBERON:0002771!7.29e-14!3;UBERON:0001871!1.63e-13!7;UBERON:0000025!3.77e-11!194;UBERON:0001870!2.02e-10!2;UBERON:0004111!2.43e-10!241;UBERON:0000064!5.79e-10!219;UBERON:0000483!1.91e-09!309;UBERON:0002360!1.93e-09!2;UBERON:0000094!1.93e-09!2;UBERON:0007645!1.93e-09!2;UBERON:0000119!2.79e-09!312;UBERON:0000477!3.65e-09!286;UBERON:0000475!5.39e-09!365;UBERON:0000481!1.61e-07!347;UBERON:0000062!1.62e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.64e-68;20!UBERON:0002619;1.54e-62;22!UBERON:0002021;6.92e-58;5!UBERON:0000956;2.69e-55;25!UBERON:0000203;2.69e-55;25!UBERON:0001870;2.85e-54;3!UBERON:0001869;5.17e-41;32!UBERON:0002791;3.91e-39;32!UBERON:0002702;8.17e-37;2!UBERON:0003528;1.33e-36;34!UBERON:0002020;1.33e-36;34!UBERON:0001893;9.64e-35;34!UBERON:0000200;1.40e-27;6!UBERON:0002780;2.10e-23;41!UBERON:0001890;2.10e-23;41!UBERON:0002581;2.47e-19;1!UBERON:0002902;2.47e-19;1!UBERON:0009899;2.47e-19;1!UBERON:0001872;2.17e-15;5!UBERON:0000073;6.89e-13;53!UBERON:0002616;6.89e-13;53!UBERON:0000955;2.27e-12;68!UBERON:0001017;1.21e-11;75!UBERON:0001016;4.16e-09;83 | |ontology_enrichment_uberon_v019=UBERON:0001950;1.64e-68;20!UBERON:0002619;1.54e-62;22!UBERON:0002021;6.92e-58;5!UBERON:0000956;2.69e-55;25!UBERON:0000203;2.69e-55;25!UBERON:0001870;2.85e-54;3!UBERON:0001869;5.17e-41;32!UBERON:0002791;3.91e-39;32!UBERON:0002702;8.17e-37;2!UBERON:0003528;1.33e-36;34!UBERON:0002020;1.33e-36;34!UBERON:0001893;9.64e-35;34!UBERON:0000200;1.40e-27;6!UBERON:0002780;2.10e-23;41!UBERON:0001890;2.10e-23;41!UBERON:0002581;2.47e-19;1!UBERON:0002902;2.47e-19;1!UBERON:0009899;2.47e-19;1!UBERON:0001872;2.17e-15;5!UBERON:0000073;6.89e-13;53!UBERON:0002616;6.89e-13;53!UBERON:0000955;2.27e-12;68!UBERON:0001017;1.21e-11;75!UBERON:0001016;4.16e-09;83 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.85e-68,20;UBERON:0002619,2.56e-62,22;UBERON:0002021,1.55e-57,5;UBERON:0000956,4.22e-55,25;UBERON:0000203,4.22e-55,25;UBERON:0001870,3.76e-54,3;UBERON:0002791,2.34e-43,32;UBERON:0001869,2.34e-43,32;UBERON:0003528,7.30e-41,34;UBERON:0002020,7.30e-41,34;UBERON:0001893,7.30e-41,34;UBERON:0002702,9.84e-37,2;UBERON:0002780,5.35e-34,41;UBERON:0001890,5.35e-34,41;UBERON:0003080,5.35e-34,41;UBERON:0006240,5.35e-34,41;UBERON:0000200,1.76e-27,6;UBERON:0000073,2.33e-26,53;UBERON:0002616,2.33e-26,53;UBERON:0000955,4.49e-25,68;UBERON:0006238,4.49e-25,68;UBERON:0001049,5.97e-25,56;UBERON:0005068,5.97e-25,56;UBERON:0006241,5.97e-25,56;UBERON:0007135,5.97e-25,56;UBERON:0003056,6.64e-23,61;UBERON:0001017,4.56e-21,81;UBERON:0002902,2.25e-19,1;UBERON:0009899,2.25e-19,1;UBERON:0002581,3.25e-19,1;UBERON:0001016,5.93e-19,89;UBERON:0003075,5.47e-17,82;UBERON:0007284,5.47e-17,82;UBERON:0002346,3.49e-16,86;UBERON:0001872,2.17e-15,5;UBERON:0010371,2.58e-13,104;UBERON:0010314,2.20e-10,132;UBERON:0004121,1.03e-09,171;UBERON:0000924,1.03e-09,171;UBERON:0006601,1.03e-09,171;UBERON:0011216,6.17e-09,223;UBERON:0000025,1.13e-08,192;UBERON:0007023,1.95e-07,114;UBERON:0004111,8.76e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.649376687132959,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,1.26621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0.607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,1.77213635993397,0.244052529803926,1.001527445652,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,2.8339315265117,1.11743701340006,0.205116364240755,1.00828678488687,1.38314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675375846183947,0.781078098613847,1.44680757550829,0.760989722326882,0,0,0,0,0,0,0,0,0.455324382702595,0.0887023701626388,0,0,0,1.11813715056843,0,0,0.235479278551542,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,1.64910775118144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.543931921527318,0.436350690340377,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.649376687132959,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,1.26621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0.607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,1.77213635993397,0.244052529803926,1.001527445652,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,2.8339315265117,1.11743701340006,0.205116364240755,1.00828678488687,1.38314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675375846183947,0.781078098613847,1.44680757550829,0.760989722326882,0,0,0,0,0,0,0,0,0.455324382702595,0.0887023701626388,0,0,0,1.11813715056843,0,0,0.235479278551542,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,1.64910775118144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.543931921527318,0.436350690340377,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | ||
|short_description=p@chr7:39018373..39018384,+ | |short_description=p@chr7:39018373..39018384,+ | ||
}} | }} |
Latest revision as of 09:55, 31 July 2015
Short description: | p@chr7:39018373..39018384, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:39018373..39018384, + |
Coexpression cluster: | C4536_occipital_brain_medial_frontal_parietal_insula_postcentral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data