FFCP PHASE1:Hg19::chr7:76825469..76825505,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:76825469..76825505,- | |||
|coexpression_cluster_id=C719 | |||
|description=CAGE_peak_at_chr7:76825469..76825505,- | |description=CAGE_peak_at_chr7:76825469..76825505,- | ||
|id=chr7:76825469..76825505,- | |id=chr7:76825469..76825505,- | ||
|ontology_enrichment_celltype=CL:0000766!8.65e-35!76;CL:0002057!5.87e-34!42;CL:0000860!4.46e-31!45;CL:0002194!1.81e-30!63;CL:0000576!1.81e-30!63;CL:0000040!1.81e-30!63;CL:0000559!1.81e-30!63;CL:0002009!3.27e-29!65;CL:0000839!2.59e-28!70;CL:0000557!9.18e-28!71;CL:0000738!3.82e-25!140;CL:0000763!2.97e-22!112;CL:0000049!2.97e-22!112;CL:0002087!5.79e-22!119;CL:0002031!1.32e-19!124;CL:0000037!8.13e-19!172;CL:0000566!8.13e-19!172;CL:0002032!2.73e-18!165;CL:0000837!2.73e-18!165;CL:0000988!5.50e-17!182;CL:0002393!4.15e-15!9;CL:0002397!4.15e-15!9;CL:0000775!7.84e-08!3;CL:0000875!8.55e-08!3;CL:0002396!8.55e-08!3 | |ontology_enrichment_celltype=CL:0000766!8.65e-35!76;CL:0002057!5.87e-34!42;CL:0000860!4.46e-31!45;CL:0002194!1.81e-30!63;CL:0000576!1.81e-30!63;CL:0000040!1.81e-30!63;CL:0000559!1.81e-30!63;CL:0002009!3.27e-29!65;CL:0000839!2.59e-28!70;CL:0000557!9.18e-28!71;CL:0000738!3.82e-25!140;CL:0000763!2.97e-22!112;CL:0000049!2.97e-22!112;CL:0002087!5.79e-22!119;CL:0002031!1.32e-19!124;CL:0000037!8.13e-19!172;CL:0000566!8.13e-19!172;CL:0002032!2.73e-18!165;CL:0000837!2.73e-18!165;CL:0000988!5.50e-17!182;CL:0002393!4.15e-15!9;CL:0002397!4.15e-15!9;CL:0000775!7.84e-08!3;CL:0000875!8.55e-08!3;CL:0002396!8.55e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000875;9.98e-31;3!CL:0002396;9.98e-31;3!CL:0000775;1.16e-30;3!CL:0002393;5.81e-16;6!CL:0002397;5.81e-16;6!CL:0000766;1.41e-15;69!CL:0000094;6.76e-12;8!CL:0000576;6.87e-11;48!CL:0000081;8.54e-09;11!CL:0000235;1.55e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,5.84e-40,9;CL:0002397,5.84e-40,9;CL:0000775,7.37e-31,3;CL:0000875,1.11e-30,3;CL:0002396,1.11e-30,3;CL:0000766,1.64e-28,72;CL:0000473,1.41e-23,48;CL:0000234,1.41e-23,48;CL:0002194,4.07e-22,59;CL:0000576,4.07e-22,59;CL:0000040,4.07e-22,59;CL:0000559,4.07e-22,59;CL:0002009,2.40e-21,61;CL:0000839,1.27e-19,66;CL:0000557,2.63e-19,67;CL:0000763,2.34e-18,108;CL:0000049,2.34e-18,108;CL:0000860,3.65e-18,42;CL:0002057,3.65e-18,42;CL:0000738,3.91e-14,136;CL:0000094,5.72e-12,8;CL:0002032,1.37e-11,161;CL:0000837,1.37e-11,161;CL:0000037,5.17e-11,168;CL:0002087,1.46e-10,115;CL:0000988,2.46e-10,177;CL:0002031,4.75e-10,120;CL:0000081,7.57e-09,11;CL:0000235,1.52e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;3.78e-11;42!UBERON:0004874;4.22e-11;1!CL:0000049;7.01e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.88e-31!102;UBERON:0003061!1.88e-31!102;UBERON:0002193!2.04e-27!112;UBERON:0002371!1.91e-23!80;UBERON:0001474!4.46e-21!86;UBERON:0004765!9.91e-18!101;UBERON:0001434!9.91e-18!101;UBERON:0003081!7.93e-17!216;UBERON:0002405!5.52e-16!115;UBERON:0007023!6.45e-12!115;UBERON:0000178!1.38e-09!15;UBERON:0000179!1.38e-09!15;UBERON:0000463!1.38e-09!15;UBERON:0002204!2.36e-09!167;UBERON:0003978!5.30e-07!3;UBERON:0009751!5.30e-07!3;UBERON:0000946!5.30e-07!3;UBERON:0002523!5.30e-07!3;UBERON:0005983!5.30e-07!3;UBERON:0002165!5.30e-07!3;UBERON:0002062!5.30e-07!3;UBERON:0007280!5.30e-07!3 | |ontology_enrichment_uberon=UBERON:0002390!1.88e-31!102;UBERON:0003061!1.88e-31!102;UBERON:0002193!2.04e-27!112;UBERON:0002371!1.91e-23!80;UBERON:0001474!4.46e-21!86;UBERON:0004765!9.91e-18!101;UBERON:0001434!9.91e-18!101;UBERON:0003081!7.93e-17!216;UBERON:0002405!5.52e-16!115;UBERON:0007023!6.45e-12!115;UBERON:0000178!1.38e-09!15;UBERON:0000179!1.38e-09!15;UBERON:0000463!1.38e-09!15;UBERON:0002204!2.36e-09!167;UBERON:0003978!5.30e-07!3;UBERON:0009751!5.30e-07!3;UBERON:0000946!5.30e-07!3;UBERON:0002523!5.30e-07!3;UBERON:0005983!5.30e-07!3;UBERON:0002165!5.30e-07!3;UBERON:0002062!5.30e-07!3;UBERON:0007280!5.30e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000989;4.22e-11;1!UBERON:0008811;4.22e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.36e-17,98;UBERON:0003061,1.36e-17,98;UBERON:0002371,7.69e-17,76;UBERON:0002193,8.82e-16,108;UBERON:0001474,1.71e-15,82;UBERON:0001434,1.00e-14,100;UBERON:0004765,5.70e-14,90;UBERON:0002405,1.82e-13,93;UBERON:0000989,2.96e-11,1;UBERON:0008811,2.96e-11,1;UBERON:0006258,2.96e-11,1;UBERON:0005876,2.96e-11,1;UBERON:0004874,2.96e-11,1;UBERON:0003081,1.12e-08,203;UBERON:0002204,4.88e-08,167 | |||
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| ||
|short_description=p@chr7:76825469..76825505,- | |short_description=p@chr7:76825469..76825505,- | ||
}} | }} |
Latest revision as of 11:48, 31 July 2015
Short description: | p@chr7:76825469..76825505, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:76825469..76825505, - |
Coexpression cluster: | C719_Neutrophils_CD14CD16_CD14_blood_Eosinophils_Peripheral_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 5.84e-40 | 9 |
CD14-positive, CD16-positive monocyte | 5.84e-40 | 9 |
neutrophil | 7.37e-31 | 3 |
non-classical monocyte | 1.11e-30 | 3 |
CD14-low, CD16-positive monocyte | 1.11e-30 | 3 |
myeloid leukocyte | 1.64e-28 | 72 |
defensive cell | 1.41e-23 | 48 |
phagocyte | 1.41e-23 | 48 |
monopoietic cell | 4.07e-22 | 59 |
monocyte | 4.07e-22 | 59 |
monoblast | 4.07e-22 | 59 |
promonocyte | 4.07e-22 | 59 |
macrophage dendritic cell progenitor | 2.40e-21 | 61 |
myeloid lineage restricted progenitor cell | 1.27e-19 | 66 |
granulocyte monocyte progenitor cell | 2.63e-19 | 67 |
myeloid cell | 2.34e-18 | 108 |
common myeloid progenitor | 2.34e-18 | 108 |
classical monocyte | 3.65e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.65e-18 | 42 |
leukocyte | 3.91e-14 | 136 |
granulocyte | 5.72e-12 | 8 |
hematopoietic oligopotent progenitor cell | 1.37e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.37e-11 | 161 |
hematopoietic stem cell | 5.17e-11 | 168 |
nongranular leukocyte | 1.46e-10 | 115 |
hematopoietic cell | 2.46e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 4.75e-10 | 120 |
blood cell | 7.57e-09 | 11 |
macrophage | 1.52e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.36e-17 | 98 |
blood island | 1.36e-17 | 98 |
bone marrow | 7.69e-17 | 76 |
hemolymphoid system | 8.82e-16 | 108 |
bone element | 1.71e-15 | 82 |
skeletal system | 1.00e-14 | 100 |
skeletal element | 5.70e-14 | 90 |
immune system | 1.82e-13 | 93 |
penis | 2.96e-11 | 1 |
intromittent organ | 2.96e-11 | 1 |
lateral plate mesenchyme | 2.96e-11 | 1 |
undifferentiated genital tubercle | 2.96e-11 | 1 |
somatopleure | 2.96e-11 | 1 |
lateral plate mesoderm | 1.12e-08 | 203 |
musculoskeletal system | 4.88e-08 | 167 |