FFCP PHASE1:Hg19::chr8:6459787..6459796,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:6459787..6459796,+ | |||
|coexpression_cluster_id=C328 | |||
|description=CAGE_peak_at_chr8:6459787..6459796,+ | |description=CAGE_peak_at_chr8:6459787..6459796,+ | ||
|id=chr8:6459787..6459796,+ | |id=chr8:6459787..6459796,+ | ||
|ontology_enrichment_celltype=CL:0005020!4.49e-21!6;CL:0002138!4.49e-21!6;CL:0005022!4.49e-21!6;CL:0002139!6.55e-15!24;CL:0000115!1.66e-13!35;CL:0002078!4.01e-10!44;CL:0000213!3.72e-07!57;CL:0000215!3.72e-07!57 | |ontology_enrichment_celltype=CL:0005020!4.49e-21!6;CL:0002138!4.49e-21!6;CL:0005022!4.49e-21!6;CL:0002139!6.55e-15!24;CL:0000115!1.66e-13!35;CL:0002078!4.01e-10!44;CL:0000213!3.72e-07!57;CL:0000215!3.72e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002138;2.70e-53;6!CL:0000115;4.14e-19;36!CL:0002139;1.04e-13;24!CL:0002078;7.59e-12;45!CL:0002262;3.02e-11;2!CL:1000398;3.02e-11;2!CL:0000213;2.69e-07;58!CL:0000215;2.69e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,2.70e-53,6;CL:0002138,2.70e-53,6;CL:0005022,2.70e-53,6;CL:0000115,7.72e-20,36;CL:0002078,7.13e-16,45;CL:0002139,1.04e-13,24;CL:0000213,2.63e-12,58;CL:0000215,2.63e-12,58;CL:0002262,2.73e-11,2;CL:1000398,2.73e-11,2 | |||
|ontology_enrichment_development_v019=CL:0005022;2.70e-53;6!UBERON:0003124;7.72e-21;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;4.22e-21;1!DOID:4549;4.22e-21;1!DOID:5861;4.22e-21;1!DOID:6496;4.22e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,4.22e-21,1;DOID:4549,4.22e-21,1;DOID:5861,4.22e-21,1;DOID:6496,4.22e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0001473!1.30e-15!8;UBERON:0004536!1.30e-15!8;UBERON:0006558!1.30e-15!8;UBERON:0002465!2.49e-12!10;UBERON:0007023!3.79e-12!115;UBERON:0002133!7.77e-08!2;UBERON:0002360!2.16e-07!2;UBERON:0000094!2.16e-07!2;UBERON:0007645!2.16e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;3.89e-40;8!UBERON:0004536;3.89e-40;8!UBERON:0006558;3.89e-40;8!UBERON:0002465;3.13e-32;10!UBERON:0002405;3.14e-12;27!UBERON:0001281;3.02e-11;2!UBERON:0003497;3.02e-11;2!UBERON:0003909;3.02e-11;2!UBERON:0003835;3.02e-11;2!UBERON:0002418;6.34e-08;3!UBERON:0004755;6.34e-08;3!UBERON:0001280;6.34e-08;3!UBERON:0004647;6.34e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,3.89e-40,8;UBERON:0004536,3.89e-40,8;UBERON:0006558,3.89e-40,8;UBERON:0002465,3.13e-32,10;UBERON:0001281,2.73e-11,2;UBERON:0003497,2.73e-11,2;UBERON:0003909,2.73e-11,2;UBERON:0003835,2.73e-11,2;UBERON:0001280,5.93e-08,3;UBERON:0004647,5.93e-08,3;UBERON:0005171,5.93e-08,3;UBERON:0002418,6.34e-08,3;UBERON:0004755,6.34e-08,3;UBERON:0000055,1.85e-07,68 | |||
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| ||
|short_description=p@chr8:6459787..6459796,+ | |short_description=p@chr8:6459787..6459796,+ | ||
}} | }} |
Latest revision as of 19:22, 31 July 2015
Short description: | p@chr8:6459787..6459796, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:6459787..6459796, + |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 2.70e-53 | 6 |
endothelial cell of lymphatic vessel | 2.70e-53 | 6 |
vascular lymphangioblast | 2.70e-53 | 6 |
endothelial cell | 7.72e-20 | 36 |
meso-epithelial cell | 7.13e-16 | 45 |
endothelial cell of vascular tree | 1.04e-13 | 24 |
lining cell | 2.63e-12 | 58 |
barrier cell | 2.63e-12 | 58 |
endothelial cell of sinusoid | 2.73e-11 | 2 |
endothelial cell of hepatic sinusoid | 2.73e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 3.89e-40 | 8 |
lymph vasculature | 3.89e-40 | 8 |
lymphatic part of lymphoid system | 3.89e-40 | 8 |
lymphoid system | 3.13e-32 | 10 |
hepatic sinusoid | 2.73e-11 | 2 |
abdomen blood vessel | 2.73e-11 | 2 |
sinusoid | 2.73e-11 | 2 |
abdominal segment blood vessel | 2.73e-11 | 2 |
liver parenchyma | 5.93e-08 | 3 |
liver lobule | 5.93e-08 | 3 |
hepatic duct | 5.93e-08 | 3 |
cartilage tissue | 6.34e-08 | 3 |
skeletal tissue | 6.34e-08 | 3 |
vessel | 1.85e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 4.22e-21 | 1 |
extraosseous chondrosarcoma | 4.22e-21 | 1 |
myxoid chondrosarcoma | 4.22e-21 | 1 |
extraskeletal myxoid chondrosarcoma | 4.22e-21 | 1 |