FFCP PHASE1:Hg19::chr8:95654740..95654788,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:95654740..95654788,+ | |||
|description=CAGE_peak_at_chr8:95654740..95654788,+ | |description=CAGE_peak_at_chr8:95654740..95654788,+ | ||
|id=chr8:95654740..95654788,+ | |id=chr8:95654740..95654788,+ | ||
|ontology_enrichment_celltype=CL:0000066!9.29e-16!254;CL:0002076!6.00e-12!43;CL:0000039!9.71e-12!7;CL:0000586!9.71e-12!7;CL:0000223!6.58e-10!59;CL:0000082!5.46e-07!19 | |ontology_enrichment_celltype=CL:0000066!9.29e-16!254;CL:0002076!6.00e-12!43;CL:0000039!9.71e-12!7;CL:0000586!9.71e-12!7;CL:0000223!6.58e-10!59;CL:0000082!5.46e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002327;2.66e-13;4!CL:0002076;4.61e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,3.87e-13,4;CL:0000223,2.24e-07,58;CL:0002076,2.45e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.10e-13;1 | |||
|ontology_enrichment_disease=DOID:305!9.82e-27!106;DOID:0050687!1.42e-25!143;DOID:1749!1.85e-19!14;DOID:14566!3.87e-17!239;DOID:162!4.60e-16!235;DOID:0050615!1.47e-08!16;DOID:4362!8.27e-08!5;DOID:1324!3.85e-07!15;DOID:3095!5.67e-07!22;DOID:2994!5.67e-07!22 | |ontology_enrichment_disease=DOID:305!9.82e-27!106;DOID:0050687!1.42e-25!143;DOID:1749!1.85e-19!14;DOID:14566!3.87e-17!239;DOID:162!4.60e-16!235;DOID:0050615!1.47e-08!16;DOID:4362!8.27e-08!5;DOID:1324!3.85e-07!15;DOID:3095!5.67e-07!22;DOID:2994!5.67e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.18e-14;14!DOID:4074;1.75e-07;2!DOID:4905;1.75e-07;2!DOID:3493;1.75e-07;2!DOID:3498;1.75e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.10e-14,14;DOID:305,1.34e-10,106;DOID:3493,1.28e-07,2;DOID:4074,1.54e-07,2;DOID:4905,1.54e-07,2;DOID:3498,1.54e-07,2;DOID:0050687,1.58e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000344!1.28e-10!12;UBERON:0005153!1.87e-09!37;UBERON:0004119!1.95e-08!169;UBERON:0000925!1.95e-08!169;UBERON:0006595!1.95e-08!169;UBERON:0004921!1.63e-07!129;UBERON:0004185!1.63e-07!129;UBERON:0001004!4.10e-07!72;UBERON:0001007!5.29e-07!155;UBERON:0001555!5.29e-07!155;UBERON:0007026!5.29e-07!155;UBERON:0004802!5.46e-07!19;UBERON:0000115!5.46e-07!19 | |ontology_enrichment_uberon=UBERON:0000344!1.28e-10!12;UBERON:0005153!1.87e-09!37;UBERON:0004119!1.95e-08!169;UBERON:0000925!1.95e-08!169;UBERON:0006595!1.95e-08!169;UBERON:0004921!1.63e-07!129;UBERON:0004185!1.63e-07!129;UBERON:0001004!4.10e-07!72;UBERON:0001007!5.29e-07!155;UBERON:0001555!5.29e-07!155;UBERON:0007026!5.29e-07!155;UBERON:0004802!5.46e-07!19;UBERON:0000115!5.46e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.10e-13;1!UBERON:0001785;1.10e-13;1!UBERON:0002464;1.10e-13;1!UBERON:0004904;1.10e-13;1!UBERON:0001021;1.10e-13;1!UBERON:0001911;2.66e-13;4!UBERON:0006562;1.75e-07;2!UBERON:0003714;1.75e-07;2!UBERON:0005162;1.75e-07;2!UBERON:0000122;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.10e-13,1;UBERON:0001785,1.10e-13,1;UBERON:0002464,1.10e-13,1;UBERON:0004904,1.10e-13,1;UBERON:0001021,1.10e-13,1;UBERON:0003902,1.10e-13,1;UBERON:0005425,1.10e-13,1;UBERON:0001911,3.87e-13,4;UBERON:0005333,3.87e-13,4;UBERON:0008425,3.87e-13,4;UBERON:0005311,3.87e-13,4;UBERON:0003714,1.75e-07,2;UBERON:0005162,1.75e-07,2;UBERON:0000122,1.75e-07,2;UBERON:0000076,5.14e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34337784054272,1.16253575405585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.644566922551274,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81813406897076,0.576570202095319,0,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0.539210106883961,2.14825409610731,0,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,0.796554137998498,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,1.25481369850743,0,0,0.23056390438806,0.359030577639089,0.760531603454056,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,1.76098157038881,0,0,0,0,0,3.30711522711884,0.207376382794494,0,0,0,0,1.13843818411917,0,0,0.0979923974143777,0.261177619741208,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0.72045208577053,0,0,0.14405479798815,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0,0,0.275078873194468,0,0,0,0,0,0,0,0.105600336519406,0,0.575745591958336,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,6.38341257770182,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0.699397538597222,0.622077260032973,0.255788742607303,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,1.76665893301846,0.471878893390961,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,1.66091155931474,0,0,0,0.227662191351298,0,0,0,0,0,0,0.333694205676207,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,1.86485443868962,0,0,0,0,0,0.467878926924211,0,0,3.04954421505192,0,0.905777061400041,0.231522474323834,0.218559560503957,0,0,0.471353094203252,0,0,0,0,0,0,0,0.535661815816973,1.41157948686277,5.69713703493095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0.801652215796681,0.18378979906969,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34337784054272,1.16253575405585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.644566922551274,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81813406897076,0.576570202095319,0,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0.539210106883961,2.14825409610731,0,0,0,0,0,0,0,0.520855522170466,0.0874599999961957,0,0.796554137998498,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,1.25481369850743,0,0,0.23056390438806,0.359030577639089,0.760531603454056,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,1.76098157038881,0,0,0,0,0,3.30711522711884,0.207376382794494,0,0,0,0,1.13843818411917,0,0,0.0979923974143777,0.261177619741208,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0.72045208577053,0,0,0.14405479798815,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0,0,0.275078873194468,0,0,0,0,0,0,0,0.105600336519406,0,0.575745591958336,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,6.38341257770182,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0.699397538597222,0.622077260032973,0.255788742607303,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,1.76665893301846,0.471878893390961,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,1.66091155931474,0,0,0,0.227662191351298,0,0,0,0,0,0,0.333694205676207,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,1.86485443868962,0,0,0,0,0,0.467878926924211,0,0,3.04954421505192,0,0.905777061400041,0.231522474323834,0.218559560503957,0,0,0.471353094203252,0,0,0,0,0,0,0,0.535661815816973,1.41157948686277,5.69713703493095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0.801652215796681,0.18378979906969,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:95654740..95654788,+ | |short_description=p@chr8:95654740..95654788,+ | ||
}} | }} |
Latest revision as of 20:40, 31 July 2015
Short description: | p@chr8:95654740..95654788, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:95654740..95654788, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 3.87e-13 | 4 |
endodermal cell | 2.24e-07 | 58 |
endo-epithelial cell | 2.45e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.10e-13 | 1 |
cranial nerve | 1.10e-13 | 1 |
nerve trunk | 1.10e-13 | 1 |
nerve connecting eye with brain | 1.10e-13 | 1 |
nerve | 1.10e-13 | 1 |
retinal neural layer | 1.10e-13 | 1 |
presumptive neural retina | 1.10e-13 | 1 |
mammary gland | 3.87e-13 | 4 |
mammary bud | 3.87e-13 | 4 |
mammary ridge | 3.87e-13 | 4 |
mammary placode | 3.87e-13 | 4 |
neural tissue | 1.75e-07 | 2 |
multi cell component structure | 1.75e-07 | 2 |
neuron projection bundle | 1.75e-07 | 2 |
external ectoderm | 5.14e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.10e-14 | 14 |
carcinoma | 1.34e-10 | 106 |
signet ring cell adenocarcinoma | 1.28e-07 | 2 |
pancreas adenocarcinoma | 1.54e-07 | 2 |
pancreatic carcinoma | 1.54e-07 | 2 |
pancreatic ductal adenocarcinoma | 1.54e-07 | 2 |
cell type cancer | 1.58e-07 | 143 |