FFCP PHASE1:Hg19::chr9:33446618..33446630,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:33446618..33446630,+
|short_description=p@chr9:33446618..33446630,+
|description=CAGE_peak_at_chr9:33446618..33446630,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:33446618..33446630,+ | |||
|coexpression_cluster_id=C496 | |||
|description=CAGE_peak_at_chr9:33446618..33446630,+ | |||
|id=chr9:33446618..33446630,+ | |||
|ontology_enrichment_celltype=CL:0000791!8.94e-26!18;CL:0000789!8.94e-26!18;CL:0002420!8.94e-26!18;CL:0002419!8.94e-26!18;CL:0000790!8.94e-26!18;CL:0000084!2.70e-23!25;CL:0000827!2.70e-23!25;CL:0000838!1.82e-17!52;CL:0000542!4.90e-17!53;CL:0000051!4.90e-17!53;CL:0000625!1.33e-16!11;CL:0000624!1.20e-12!6;CL:0000898!2.90e-10!3;CL:0000623!1.10e-09!3;CL:0000825!1.10e-09!3;CL:0000738!4.99e-08!140;CL:0002087!8.88e-08!119;CL:0000815!1.53e-07!2;CL:0000792!1.53e-07!2;CL:0002677!1.53e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000815;3.30e-23;2!CL:0000792;3.30e-23;2!CL:0002677;3.30e-23;2!CL:0000898;8.12e-16;3!CL:0000791;2.29e-15;18!CL:0000789;2.29e-15;18!CL:0002419;2.29e-15;18!CL:0000084;4.78e-11;25!CL:0000625;1.12e-09;11!CL:0000624;2.29e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,1.59e-23,2;CL:0000792,1.59e-23,2;CL:0002677,1.59e-23,2;CL:0000898,4.99e-16,3;CL:0000791,1.77e-15,18;CL:0000789,1.77e-15,18;CL:0002420,1.77e-15,18;CL:0002419,1.77e-15,18;CL:0000790,1.77e-15,18;CL:0000084,3.99e-11,25;CL:0000827,3.99e-11,25;CL:0000625,1.06e-09,11;CL:0000624,1.80e-08,6;CL:0000838,2.38e-07,52;CL:0000542,3.33e-07,53;CL:0000051,3.33e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;2.29e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.25e-17!15;UBERON:0000179!1.25e-17!15;UBERON:0000463!1.25e-17!15;UBERON:0002370!7.47e-08!4;UBERON:0005058!7.47e-08!4;UBERON:0009113!7.47e-08!4;UBERON:0003295!7.47e-08!4;UBERON:0005562!7.47e-08!4;UBERON:0004177!4.10e-07!7;UBERON:0007023!4.97e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;6.37e-24;2!UBERON:0005058;6.37e-24;2!UBERON:0009113;6.37e-24;2!UBERON:0000178;6.10e-12;15!UBERON:0000179;6.10e-12;15!UBERON:0000463;6.10e-12;15!UBERON:0002390;2.14e-10;32!UBERON:0004177;3.80e-10;5!UBERON:0005057;3.80e-10;5!UBERON:0002193;1.76e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.86e-12,4;UBERON:0005058,1.86e-12,4;UBERON:0009113,1.86e-12,4;UBERON:0003295,1.86e-12,4;UBERON:0005562,1.86e-12,4;UBERON:0000178,7.05e-12,15;UBERON:0000179,7.05e-12,15;UBERON:0000463,7.05e-12,15;UBERON:0003351,1.34e-08,6;UBERON:0004177,1.72e-07,7;UBERON:0005057,1.72e-07,7 | |||
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| ||
|short_description=p@chr9:33446618..33446630,+ | |||
}} | }} |
Latest revision as of 01:28, 1 August 2015
Short description: | p@chr9:33446618..33446630, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:33446618..33446630, + |
Coexpression cluster: | C496_thymus_CD4_CD8_hairy_vein_chronic_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 1.59e-23 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.59e-23 | 2 |
naive regulatory T cell | 1.59e-23 | 2 |
naive T cell | 4.99e-16 | 3 |
mature alpha-beta T cell | 1.77e-15 | 18 |
alpha-beta T cell | 1.77e-15 | 18 |
immature T cell | 1.77e-15 | 18 |
mature T cell | 1.77e-15 | 18 |
immature alpha-beta T cell | 1.77e-15 | 18 |
T cell | 3.99e-11 | 25 |
pro-T cell | 3.99e-11 | 25 |
CD8-positive, alpha-beta T cell | 1.06e-09 | 11 |
CD4-positive, alpha-beta T cell | 1.80e-08 | 6 |
lymphoid lineage restricted progenitor cell | 2.38e-07 | 52 |
lymphocyte | 3.33e-07 | 53 |
common lymphoid progenitor | 3.33e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.86e-12 | 4 |
hemolymphoid system gland | 1.86e-12 | 4 |
thymic region | 1.86e-12 | 4 |
pharyngeal gland | 1.86e-12 | 4 |
thymus primordium | 1.86e-12 | 4 |
blood | 7.05e-12 | 15 |
haemolymphatic fluid | 7.05e-12 | 15 |
organism substance | 7.05e-12 | 15 |
pharyngeal epithelium | 1.34e-08 | 6 |
hemopoietic organ | 1.72e-07 | 7 |
immune organ | 1.72e-07 | 7 |