FFCP PHASE1:Hg19::chr9:38437716..38437729,+: Difference between revisions
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|id=chr9:38437716..38437729,+
|short_description=p@chr9:38437716..38437729,+
|description=CAGE_peak_at_chr9:38437716..38437729,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:38437716..38437729,+ | |||
|coexpression_cluster_id=C318 | |||
|description=CAGE_peak_at_chr9:38437716..38437729,+ | |||
|id=chr9:38437716..38437729,+ | |||
|ontology_enrichment_celltype=CL:0000223!8.59e-09!59;CL:0002563!2.24e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002580;9.09e-34;3!CL:0002334;3.13e-09;12!CL:0002327;1.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,9.10e-34,3;CL:0002334,3.14e-09,12;CL:0002327,1.40e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;5.92e-26;1!UBERON:0009497;1.17e-08;13!UBERON:0001041;3.82e-08;30 | |||
|ontology_enrichment_disease=DOID:7!4.52e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.69e-07;4!DOID:1612;1.69e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.40e-07,4;DOID:1612,1.40e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0003929!5.62e-10!54;UBERON:0005911!4.61e-08!82;UBERON:0004119!1.89e-07!169;UBERON:0000925!1.89e-07!169;UBERON:0006595!1.89e-07!169;UBERON:0001242!2.24e-07!4;UBERON:0001262!2.24e-07!4;UBERON:0004786!2.24e-07!4;UBERON:0004808!2.24e-07!4;UBERON:0001277!2.24e-07!4;UBERON:0001007!4.00e-07!155;UBERON:0001555!4.00e-07!155;UBERON:0007026!4.00e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;6.92e-23;10!UBERON:0001443;6.99e-21;11!UBERON:0000915;8.44e-08;52!UBERON:0001911;1.69e-07;4!UBERON:0002394;1.69e-07;4!UBERON:0003928;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,5.53e-23,10;UBERON:0001443,5.70e-21,11;UBERON:0009569,4.56e-08,112;UBERON:0000915,4.72e-08,52;UBERON:0001911,1.40e-07,4;UBERON:0005333,1.40e-07,4;UBERON:0008425,1.40e-07,4;UBERON:0005311,1.40e-07,4 | |||
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|short_description=p@chr9:38437716..38437729,+ | |||
}} | }} |
Latest revision as of 02:04, 1 August 2015
Short description: | p@chr9:38437716..38437729, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:38437716..38437729, + |
Coexpression cluster: | C318_hepatoma_Intestinal_bile_small_colon_Prostate_endometrial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 9.10e-34 | 3 |
preadipocyte | 3.14e-09 | 12 |
mammary gland epithelial cell | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
breast | 5.53e-23 | 10 |
chest | 5.70e-21 | 11 |
subdivision of trunk | 4.56e-08 | 112 |
thoracic segment of trunk | 4.72e-08 | 52 |
mammary gland | 1.40e-07 | 4 |
mammary bud | 1.40e-07 | 4 |
mammary ridge | 1.40e-07 | 4 |
mammary placode | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.40e-07 | 4 |
breast cancer | 1.40e-07 | 4 |