FFCP PHASE1:Mm9::chr19:25580353..25580364,+: Difference between revisions
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{{FFCP|EntrezGene=50796|HGNC=|MCL_coexpression_id=70|UniProt=|association_with_transcript=156bp_to_ENSMUST00000160814_5end|description=CAGE_peak_4_at_Dmrt1_5end|id=chr19:25580353..25580364,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000473!1.09e-42!14;UBERON:0003135!9.53e-40!15;UBERON:0000991!4.84e-39!18;UBERON:0005564!4.84e-39!18;UBERON:0003101!3.58e-37!16;UBERON:0000079!3.58e-37!16;UBERON:0004176!6.71e-35!17;UBERON:0009196!6.71e-35!17;UBERON:0009117!6.71e-35!17;UBERON:0003133!7.96e-34!24;UBERON:0005156!4.37e-31!26;UBERON:0000990!4.37e-31!26;UBERON:0002323!4.00e-18!37;UBERON:0004458!4.00e-18!37;UBERON:0003886!1.34e-17!38;UBERON:0002553!4.19e-17!39;UBERON:0000464!3.92e-11!57;UBERON:0000466!1.63e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.58e-62,14;UBERON:0003135,1.02e-57,15;UBERON:0003101,4.22e-54,16;UBERON:0000079,4.22e-54,16;UBERON:0004176,6.54e-51,17;UBERON:0009196,6.54e-51,17;UBERON:0009117,6.54e-51,17;UBERON:0000991,4.49e-48,18;UBERON:0005564,4.49e-48,18;UBERON:0003133,5.24e-36,24;UBERON:0005156,3.22e-33,26;UBERON:0000990,3.22e-33,26;UBERON:0002323,2.95e-23,37;UBERON:0004458,2.95e-23,37;UBERON:0003886,1.23e-22,38;UBERON:0002553,4.79e-22,39;UBERON:0000926,8.41e-07,120;UBERON:0004120,8.41e-07,120;UBERON:0006603,8.41e-07,120|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.32800820289447,2.54178128274764,1.65458490457098,1.55560950675238,0.904118764344118,1.68956125490778,2.11243029562357,5.208175393758,17.8260885523708,6.52277126230216,2.59227005632079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@Dmrt1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:50796 | |||
|HGNC= | |||
|MCL_coexpression_id=70 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=156bp_to_ENSMUST00000160814_5end | |||
|cluster_id=chr19:25580353..25580364,+ | |||
|description=CAGE_peak_4_at_Dmrt1_5end | |||
|id=chr19:25580353..25580364,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.09e-42!14;UBERON:0003135!9.53e-40!15;UBERON:0000991!4.84e-39!18;UBERON:0005564!4.84e-39!18;UBERON:0003101!3.58e-37!16;UBERON:0000079!3.58e-37!16;UBERON:0004176!6.71e-35!17;UBERON:0009196!6.71e-35!17;UBERON:0009117!6.71e-35!17;UBERON:0003133!7.96e-34!24;UBERON:0005156!4.37e-31!26;UBERON:0000990!4.37e-31!26;UBERON:0002323!4.00e-18!37;UBERON:0004458!4.00e-18!37;UBERON:0003886!1.34e-17!38;UBERON:0002553!4.19e-17!39;UBERON:0000464!3.92e-11!57;UBERON:0000466!1.63e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.58e-62,14;UBERON:0003135,1.02e-57,15;UBERON:0003101,4.22e-54,16;UBERON:0000079,4.22e-54,16;UBERON:0004176,6.54e-51,17;UBERON:0009196,6.54e-51,17;UBERON:0009117,6.54e-51,17;UBERON:0000991,4.49e-48,18;UBERON:0005564,4.49e-48,18;UBERON:0003133,5.24e-36,24;UBERON:0005156,3.22e-33,26;UBERON:0000990,3.22e-33,26;UBERON:0002323,2.95e-23,37;UBERON:0004458,2.95e-23,37;UBERON:0003886,1.23e-22,38;UBERON:0002553,4.79e-22,39;UBERON:0000926,8.41e-07,120;UBERON:0004120,8.41e-07,120;UBERON:0006603,8.41e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.32800820289447,2.54178128274764,1.65458490457098,1.55560950675238,0.904118764344118,1.68956125490778,2.11243029562357,5.208175393758,17.8260885523708,6.52277126230216,2.59227005632079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Dmrt1 | |||
}} |
Revision as of 19:50, 3 August 2015
Short description: | p4@Dmrt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Dmrt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:70 |
Association with transcript: | 156bp_to_ENSMUST00000160814_5end |
EntrezGene: | 50796 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 7.58e-62 | 14 |
male reproductive organ | 1.02e-57 | 15 |
male organism | 4.22e-54 | 16 |
male reproductive system | 4.22e-54 | 16 |
external genitalia | 6.54e-51 | 17 |
indifferent external genitalia | 6.54e-51 | 17 |
indifferent gonad | 6.54e-51 | 17 |
gonad | 4.49e-48 | 18 |
gonad primordium | 4.49e-48 | 18 |
reproductive organ | 5.24e-36 | 24 |
reproductive structure | 3.22e-33 | 26 |
reproductive system | 3.22e-33 | 26 |
body cavity | 2.95e-23 | 37 |
body cavity or lining | 2.95e-23 | 37 |
body cavity precursor | 1.23e-22 | 38 |
anatomical cavity | 4.79e-22 | 39 |
mesoderm | 8.41e-07 | 120 |
mesoderm-derived structure | 8.41e-07 | 120 |
presumptive mesoderm | 8.41e-07 | 120 |