FFCP PHASE1:Mm9::chr10:109563945..109563951,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:109563945..109563951,- | |||
|description=CAGE_peak_at_chr10:109563945..109563951,- | |description=CAGE_peak_at_chr10:109563945..109563951,- | ||
|id=chr10:109563945..109563951,- | |id=chr10:109563945..109563951,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.45e-13!34;UBERON:0001049!1.61e-12!52;UBERON:0005068!1.61e-12!52;UBERON:0006241!1.61e-12!52;UBERON:0007135!1.61e-12!52;UBERON:0000073!2.12e-12!75;UBERON:0001016!2.12e-12!75;UBERON:0000956!3.48e-12!21;UBERON:0001869!3.48e-12!21;UBERON:0000203!3.48e-12!21;UBERON:0002346!3.59e-12!71;UBERON:0003075!3.59e-12!71;UBERON:0007284!3.59e-12!71;UBERON:0000033!5.12e-12!63;UBERON:0004121!1.45e-11!102;UBERON:0000924!1.45e-11!102;UBERON:0006601!1.45e-11!102;UBERON:0001017!1.87e-11!73;UBERON:0005743!1.87e-11!73;UBERON:0002021!3.12e-11!10;UBERON:0000411!3.12e-11!10;UBERON:0001950!3.12e-11!10;UBERON:0000955!5.89e-11!50;UBERON:0006238!5.89e-11!50;UBERON:0002619!2.65e-10!17;UBERON:0002616!3.16e-10!49;UBERON:0002791!4.37e-10!29;UBERON:0003528!4.37e-10!29;UBERON:0001893!4.37e-10!29;UBERON:0003056!6.96e-10!49;UBERON:0002780!6.47e-09!39;UBERON:0001890!6.47e-09!39;UBERON:0006240!6.47e-09!39;UBERON:0003080!1.55e-08!40;UBERON:0007811!7.26e-07!86;UBERON:0000153!9.86e-07!94 | |ontology_enrichment_uberon=UBERON:0002020!5.45e-13!34;UBERON:0001049!1.61e-12!52;UBERON:0005068!1.61e-12!52;UBERON:0006241!1.61e-12!52;UBERON:0007135!1.61e-12!52;UBERON:0000073!2.12e-12!75;UBERON:0001016!2.12e-12!75;UBERON:0000956!3.48e-12!21;UBERON:0001869!3.48e-12!21;UBERON:0000203!3.48e-12!21;UBERON:0002346!3.59e-12!71;UBERON:0003075!3.59e-12!71;UBERON:0007284!3.59e-12!71;UBERON:0000033!5.12e-12!63;UBERON:0004121!1.45e-11!102;UBERON:0000924!1.45e-11!102;UBERON:0006601!1.45e-11!102;UBERON:0001017!1.87e-11!73;UBERON:0005743!1.87e-11!73;UBERON:0002021!3.12e-11!10;UBERON:0000411!3.12e-11!10;UBERON:0001950!3.12e-11!10;UBERON:0000955!5.89e-11!50;UBERON:0006238!5.89e-11!50;UBERON:0002619!2.65e-10!17;UBERON:0002616!3.16e-10!49;UBERON:0002791!4.37e-10!29;UBERON:0003528!4.37e-10!29;UBERON:0001893!4.37e-10!29;UBERON:0003056!6.96e-10!49;UBERON:0002780!6.47e-09!39;UBERON:0001890!6.47e-09!39;UBERON:0006240!6.47e-09!39;UBERON:0003080!1.55e-08!40;UBERON:0007811!7.26e-07!86;UBERON:0000153!9.86e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.74e-53,10;UBERON:0000411,1.74e-53,10;UBERON:0001950,1.74e-53,10;UBERON:0002619,1.40e-31,17;UBERON:0000956,1.33e-25,21;UBERON:0001869,1.33e-25,21;UBERON:0000203,1.33e-25,21;UBERON:0003528,1.41e-18,29;UBERON:0002791,1.41e-18,29;UBERON:0001893,1.41e-18,29;UBERON:0002020,7.40e-16,34;UBERON:0002780,7.88e-14,39;UBERON:0001890,7.88e-14,39;UBERON:0006240,7.88e-14,39;UBERON:0003080,1.75e-13,40;UBERON:0000073,5.97e-13,54;UBERON:0002616,1.00e-11,46;UBERON:0000955,1.78e-11,47;UBERON:0006238,1.78e-11,47;UBERON:0003056,5.25e-11,49;UBERON:0001049,2.28e-10,52;UBERON:0005068,2.28e-10,52;UBERON:0006241,2.28e-10,52;UBERON:0007135,2.28e-10,52;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0002346,2.08e-08,64;UBERON:0003075,2.08e-08,64;UBERON:0007284,2.08e-08,64;UBERON:0010371,2.35e-07,73;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,2.20231761998777,0.127687338085188,0,0,0,0,0,0,0.30559649555362,0.589257170947335,0.427115042397309,0.372798891650601,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0.292780797011547,0,0,0,0,0,0,0.915001205637253,0,0.521472960576829,0.767146371990992,0.20778804455956,0.324482526135515,0,0,0,0,0.130120442962704,0,0,0,0.0680364991513279,0.12811372028485,0.374806898238915,0.258703370739016,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0.238968797952552,0.445597348164788,0,0,0.292255857911312,0,0.321321316421807,0,0,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30162618253588,0.572895513439397,4.29632955859219,2.74033007908257,2.2661816921691,0.675022500231806,3.15224842256954,2.26571204492102,4.14208249401456,0,0,0.341467211508268,0.243106717068294,0,0,0.666740183404846,0,0,0,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0,0,0.0846146078916765,0.182927972872773,0,0.407412341537585,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,2.20231761998777,0.127687338085188,0,0,0,0,0,0,0.30559649555362,0.589257170947335,0.427115042397309,0.372798891650601,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0.292780797011547,0,0,0,0,0,0,0.915001205637253,0,0.521472960576829,0.767146371990992,0.20778804455956,0.324482526135515,0,0,0,0,0.130120442962704,0,0,0,0.0680364991513279,0.12811372028485,0.374806898238915,0.258703370739016,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0.238968797952552,0.445597348164788,0,0,0.292255857911312,0,0.321321316421807,0,0,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30162618253588,0.572895513439397,4.29632955859219,2.74033007908257,2.2661816921691,0.675022500231806,3.15224842256954,2.26571204492102,4.14208249401456,0,0,0.341467211508268,0.243106717068294,0,0,0.666740183404846,0,0,0,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0.238436189947321,0,0,0.0846146078916765,0.182927972872773,0,0.407412341537585,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr10:109563945..109563951,- | |short_description=p@chr10:109563945..109563951,- | ||
}} | }} |
Latest revision as of 20:39, 3 August 2015
Short description: | p@chr10:109563945..109563951, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:109563945..109563951, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.74e-53 | 10 |
visual cortex | 1.74e-53 | 10 |
neocortex | 1.74e-53 | 10 |
regional part of cerebral cortex | 1.40e-31 | 17 |
cerebral cortex | 1.33e-25 | 21 |
cerebral hemisphere | 1.33e-25 | 21 |
pallium | 1.33e-25 | 21 |
brain grey matter | 1.41e-18 | 29 |
regional part of telencephalon | 1.41e-18 | 29 |
telencephalon | 1.41e-18 | 29 |
gray matter | 7.40e-16 | 34 |
regional part of forebrain | 7.88e-14 | 39 |
forebrain | 7.88e-14 | 39 |
future forebrain | 7.88e-14 | 39 |
anterior neural tube | 1.75e-13 | 40 |
regional part of nervous system | 5.97e-13 | 54 |
regional part of brain | 1.00e-11 | 46 |
brain | 1.78e-11 | 47 |
future brain | 1.78e-11 | 47 |
pre-chordal neural plate | 5.25e-11 | 49 |
neural tube | 2.28e-10 | 52 |
neural rod | 2.28e-10 | 52 |
future spinal cord | 2.28e-10 | 52 |
neural keel | 2.28e-10 | 52 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
neurectoderm | 2.08e-08 | 64 |
neural plate | 2.08e-08 | 64 |
presumptive neural plate | 2.08e-08 | 64 |
ecto-epithelium | 2.35e-07 | 73 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |