FFCP PHASE1:Mm9::chr10:11329054..11329067,+: Difference between revisions
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{{FFCP|EntrezGene=30058|HGNC=|MCL_coexpression_id=81|UniProt=Q9WVA2|association_with_transcript=33bp_to_ENSMUST00000052902_5end|description=CAGE_peak_4_at_Timm8a1_5end|id=chr10:11329054..11329067,+|ontology_enrichment_celltype=CL:0000063!2.96e-22!66;CL:0000988!1.53e-21!32;CL:0002032!1.53e-21!32;CL:0000037!1.53e-21!32;CL:0000566!1.53e-21!32;CL:0000837!1.53e-21!32;CL:0000838!3.16e-21!12;CL:0000791!9.63e-20!9;CL:0000789!9.63e-20!9;CL:0002420!9.63e-20!9;CL:0002419!9.63e-20!9;CL:0000790!9.63e-20!9;CL:0000084!1.69e-19!11;CL:0000827!1.69e-19!11;CL:0000542!2.12e-19!13;CL:0000051!2.12e-19!13;CL:0002320!4.97e-19!46;CL:0000134!4.97e-19!46;CL:0000219!1.04e-18!54;CL:0000624!9.80e-18!8;CL:0000144!2.06e-17!121;CL:0000012!2.06e-17!121;CL:0002031!2.85e-17!25;CL:0000548!3.88e-15!115;CL:0000004!3.88e-15!115;CL:0000255!3.88e-15!115;CL:0002371!1.49e-14!118;CL:0000738!3.01e-14!17;CL:0002087!3.01e-14!17;CL:0000893!3.30e-14!6;CL:0002489!3.30e-14!6;CL:0000898!3.30e-14!6;CL:0000809!3.30e-14!6;CL:0000810!3.30e-14!6;CL:0000895!3.30e-14!6;CL:0000808!3.30e-14!6;CL:0000894!3.30e-14!6;CL:0000806!3.30e-14!6;CL:0000807!3.30e-14!6;CL:0000805!3.30e-14!6;CL:0002425!3.30e-14!6;CL:0002436!3.30e-14!6;CL:0002427!3.30e-14!6;CL:0002428!3.30e-14!6;CL:0002429!3.30e-14!6;CL:0002433!3.30e-14!6;CL:0002431!3.30e-14!6;CL:0002432!3.30e-14!6;CL:0000034!8.74e-14!97;CL:0000723!1.21e-08!91;CL:0000048!1.21e-08!91;CL:0000068!2.02e-07!3;CL:0002202!2.02e-07!3;CL:0000069!2.02e-07!3;CL:0002632!2.02e-07!3;CL:0002368!2.02e-07!3;CL:0000307!2.02e-07!3;CL:0000377!2.02e-07!3;CL:0000349!5.70e-07!3;CL:0000351!5.70e-07!3|ontology_enrichment_celltype_v019_2=CL:0000893,6.88e-27,6;CL:0002489,6.88e-27,6;CL:0000898,6.88e-27,6;CL:0000809,6.88e-27,6;CL:0000810,6.88e-27,6;CL:0000895,6.88e-27,6;CL:0000808,6.88e-27,6;CL:0000894,6.88e-27,6;CL:0000806,6.88e-27,6;CL:0000807,6.88e-27,6;CL:0000805,6.88e-27,6;CL:0002425,6.88e-27,6;CL:0002436,6.88e-27,6;CL:0002427,6.88e-27,6;CL:0002428,6.88e-27,6;CL:0002429,6.88e-27,6;CL:0002433,6.88e-27,6;CL:0002431,6.88e-27,6;CL:0002432,6.88e-27,6;CL:0000624,2.68e-20,8;CL:0000791,4.25e-18,9;CL:0000789,4.25e-18,9;CL:0002420,4.25e-18,9;CL:0002419,4.25e-18,9;CL:0000790,4.25e-18,9;CL:0000084,6.87e-15,11;CL:0000827,6.87e-15,11;CL:0000838,1.10e-13,12;CL:0000542,1.16e-12,13;CL:0000051,1.16e-12,13;CL:0000057,3.65e-11,1;CL:0000632,3.65e-11,1;CL:0000988,4.93e-11,32;CL:0002032,4.93e-11,32;CL:0000037,4.93e-11,32;CL:0000837,4.93e-11,32;CL:0002320,2.56e-10,46;CL:0000134,2.56e-10,46;CL:0002031,4.72e-10,25;CL:0000738,9.06e-10,17;CL:0002087,9.06e-10,17;CL:0000219,9.32e-09,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.97e-19!46;UBERON:0000344!6.02e-08!15;UBERON:0003126!2.02e-07!3;UBERON:0001005!2.02e-07!3;UBERON:0007196!2.02e-07!3;UBERON:0001558!2.02e-07!3;UBERON:0000358!5.70e-07!3;UBERON:0000307!5.70e-07!3;UBERON:0000331!9.66e-07!3;UBERON:0002116!9.66e-07!3;UBERON:0001204!9.66e-07!3;UBERON:0001168!9.66e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0003199,5.74e-11,1;UBERON:0002384,2.56e-10,46;UBERON:0000072,2.79e-09,27;UBERON:0002193,2.38e-07,48;UBERON:0002405,2.38e-07,48;UBERON:0002370,2.66e-07,23;UBERON:0000974,2.66e-07,23;UBERON:0004807,2.66e-07,23;UBERON:0005058,2.66e-07,23;UBERON:0003351,2.66e-07,23;UBERON:0009113,2.66e-07,23;UBERON:0003295,2.66e-07,23;UBERON:0009722,2.66e-07,23;UBERON:0005562,2.66e-07,23;UBERON:0007690,2.66e-07,23;UBERON:0006562,5.22e-07,24;UBERON:0003408,5.22e-07,24;UBERON:0001557,5.22e-07,24;UBERON:0001042,5.22e-07,24;UBERON:0008814,5.22e-07,24;UBERON:0009145,5.22e-07,24|phase1_expression=0,0,0,0.60492842261366,0,0,0,0.129123323441576,3.66050677594334,3.04283884218592,4.79410311031414,1.67521533890206,0.342401459862411,0.34968160967599,0,1.21485160433896,0.699561878128147,0.315462165358238,0.411343300817216,0,0,0,0.522399578277871,0.799962113967033,1.60586496747019,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681535739998656,0.0755715601067855,0,1.72084775396277,0,0,0,0,0,0,0.519572009205738,0.35333957451034,0,0,0,0,0.432982082022428,0.506719730950197,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.772043721344145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.538283139656854,0.503653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@Timm8a1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:30058 | |||
|HGNC= | |||
|MCL_coexpression_id=81 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9WVA2 | |||
|association_with_transcript=33bp_to_ENSMUST00000052902_5end | |||
|cluster_id=chr10:11329054..11329067,+ | |||
|description=CAGE_peak_4_at_Timm8a1_5end | |||
|id=chr10:11329054..11329067,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.96e-22!66;CL:0000988!1.53e-21!32;CL:0002032!1.53e-21!32;CL:0000037!1.53e-21!32;CL:0000566!1.53e-21!32;CL:0000837!1.53e-21!32;CL:0000838!3.16e-21!12;CL:0000791!9.63e-20!9;CL:0000789!9.63e-20!9;CL:0002420!9.63e-20!9;CL:0002419!9.63e-20!9;CL:0000790!9.63e-20!9;CL:0000084!1.69e-19!11;CL:0000827!1.69e-19!11;CL:0000542!2.12e-19!13;CL:0000051!2.12e-19!13;CL:0002320!4.97e-19!46;CL:0000134!4.97e-19!46;CL:0000219!1.04e-18!54;CL:0000624!9.80e-18!8;CL:0000144!2.06e-17!121;CL:0000012!2.06e-17!121;CL:0002031!2.85e-17!25;CL:0000548!3.88e-15!115;CL:0000004!3.88e-15!115;CL:0000255!3.88e-15!115;CL:0002371!1.49e-14!118;CL:0000738!3.01e-14!17;CL:0002087!3.01e-14!17;CL:0000893!3.30e-14!6;CL:0002489!3.30e-14!6;CL:0000898!3.30e-14!6;CL:0000809!3.30e-14!6;CL:0000810!3.30e-14!6;CL:0000895!3.30e-14!6;CL:0000808!3.30e-14!6;CL:0000894!3.30e-14!6;CL:0000806!3.30e-14!6;CL:0000807!3.30e-14!6;CL:0000805!3.30e-14!6;CL:0002425!3.30e-14!6;CL:0002436!3.30e-14!6;CL:0002427!3.30e-14!6;CL:0002428!3.30e-14!6;CL:0002429!3.30e-14!6;CL:0002433!3.30e-14!6;CL:0002431!3.30e-14!6;CL:0002432!3.30e-14!6;CL:0000034!8.74e-14!97;CL:0000723!1.21e-08!91;CL:0000048!1.21e-08!91;CL:0000068!2.02e-07!3;CL:0002202!2.02e-07!3;CL:0000069!2.02e-07!3;CL:0002632!2.02e-07!3;CL:0002368!2.02e-07!3;CL:0000307!2.02e-07!3;CL:0000377!2.02e-07!3;CL:0000349!5.70e-07!3;CL:0000351!5.70e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,6.88e-27,6;CL:0002489,6.88e-27,6;CL:0000898,6.88e-27,6;CL:0000809,6.88e-27,6;CL:0000810,6.88e-27,6;CL:0000895,6.88e-27,6;CL:0000808,6.88e-27,6;CL:0000894,6.88e-27,6;CL:0000806,6.88e-27,6;CL:0000807,6.88e-27,6;CL:0000805,6.88e-27,6;CL:0002425,6.88e-27,6;CL:0002436,6.88e-27,6;CL:0002427,6.88e-27,6;CL:0002428,6.88e-27,6;CL:0002429,6.88e-27,6;CL:0002433,6.88e-27,6;CL:0002431,6.88e-27,6;CL:0002432,6.88e-27,6;CL:0000624,2.68e-20,8;CL:0000791,4.25e-18,9;CL:0000789,4.25e-18,9;CL:0002420,4.25e-18,9;CL:0002419,4.25e-18,9;CL:0000790,4.25e-18,9;CL:0000084,6.87e-15,11;CL:0000827,6.87e-15,11;CL:0000838,1.10e-13,12;CL:0000542,1.16e-12,13;CL:0000051,1.16e-12,13;CL:0000057,3.65e-11,1;CL:0000632,3.65e-11,1;CL:0000988,4.93e-11,32;CL:0002032,4.93e-11,32;CL:0000037,4.93e-11,32;CL:0000837,4.93e-11,32;CL:0002320,2.56e-10,46;CL:0000134,2.56e-10,46;CL:0002031,4.72e-10,25;CL:0000738,9.06e-10,17;CL:0002087,9.06e-10,17;CL:0000219,9.32e-09,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.97e-19!46;UBERON:0000344!6.02e-08!15;UBERON:0003126!2.02e-07!3;UBERON:0001005!2.02e-07!3;UBERON:0007196!2.02e-07!3;UBERON:0001558!2.02e-07!3;UBERON:0000358!5.70e-07!3;UBERON:0000307!5.70e-07!3;UBERON:0000331!9.66e-07!3;UBERON:0002116!9.66e-07!3;UBERON:0001204!9.66e-07!3;UBERON:0001168!9.66e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003199,5.74e-11,1;UBERON:0002384,2.56e-10,46;UBERON:0000072,2.79e-09,27;UBERON:0002193,2.38e-07,48;UBERON:0002405,2.38e-07,48;UBERON:0002370,2.66e-07,23;UBERON:0000974,2.66e-07,23;UBERON:0004807,2.66e-07,23;UBERON:0005058,2.66e-07,23;UBERON:0003351,2.66e-07,23;UBERON:0009113,2.66e-07,23;UBERON:0003295,2.66e-07,23;UBERON:0009722,2.66e-07,23;UBERON:0005562,2.66e-07,23;UBERON:0007690,2.66e-07,23;UBERON:0006562,5.22e-07,24;UBERON:0003408,5.22e-07,24;UBERON:0001557,5.22e-07,24;UBERON:0001042,5.22e-07,24;UBERON:0008814,5.22e-07,24;UBERON:0009145,5.22e-07,24 | |||
|phase1_expression=0,0,0,0.60492842261366,0,0,0,0.129123323441576,3.66050677594334,3.04283884218592,4.79410311031414,1.67521533890206,0.342401459862411,0.34968160967599,0,1.21485160433896,0.699561878128147,0.315462165358238,0.411343300817216,0,0,0,0.522399578277871,0.799962113967033,1.60586496747019,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681535739998656,0.0755715601067855,0,1.72084775396277,0,0,0,0,0,0,0.519572009205738,0.35333957451034,0,0,0,0,0.432982082022428,0.506719730950197,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19980546198682,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.772043721344145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.538283139656854,0.503653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Timm8a1 | |||
}} |
Revision as of 21:22, 3 August 2015
Short description: | p4@Timm8a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Timm8a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | 33bp_to_ENSMUST00000052902_5end |
EntrezGene: | 30058 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
egg chamber | 5.74e-11 | 1 |
connective tissue | 2.56e-10 | 46 |
segment of respiratory tract | 2.79e-09 | 27 |
hemolymphoid system | 2.38e-07 | 48 |
immune system | 2.38e-07 | 48 |
thymus | 2.66e-07 | 23 |
neck | 2.66e-07 | 23 |
respiratory system epithelium | 2.66e-07 | 23 |
hemolymphoid system gland | 2.66e-07 | 23 |
pharyngeal epithelium | 2.66e-07 | 23 |
thymic region | 2.66e-07 | 23 |
pharyngeal gland | 2.66e-07 | 23 |
entire pharyngeal arch endoderm | 2.66e-07 | 23 |
thymus primordium | 2.66e-07 | 23 |
early pharyngeal endoderm | 2.66e-07 | 23 |
pharynx | 5.22e-07 | 24 |
gland of gut | 5.22e-07 | 24 |
upper respiratory tract | 5.22e-07 | 24 |
chordate pharynx | 5.22e-07 | 24 |
pharyngeal arch system | 5.22e-07 | 24 |
pharyngeal region of foregut | 5.22e-07 | 24 |