FFCP PHASE1:Mm9::chr5:138187195..138187255,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=78829|HGNC=|MCL_coexpression_id=2894|UniProt=Q9EQN3,Q8BV82,Q3U1U6|association_with_transcript=0bp_to_ENSMUST00000100539,NM_023910,NM_029805,uc009adt.1,uc009adu.1,uc009adv.1_5end|description=CAGE_peak_1_at_Tsc22d4_5end|id=chr5:138187195..138187255,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.12e-18!48;UBERON:0003081!3.03e-17!88;UBERON:0002390!8.13e-17!45;UBERON:0003061!8.13e-17!45;UBERON:0004177!4.97e-11!29;UBERON:0003408!2.75e-10!24;UBERON:0006562!4.57e-10!24;UBERON:0001557!4.57e-10!24;UBERON:0001042!4.57e-10!24;UBERON:0008814!4.57e-10!24;UBERON:0009145!4.57e-10!24;UBERON:0002405!4.58e-10!70;UBERON:0002370!8.15e-10!23;UBERON:0000974!8.15e-10!23;UBERON:0004807!8.15e-10!23;UBERON:0005058!8.15e-10!23;UBERON:0003351!8.15e-10!23;UBERON:0009113!8.15e-10!23;UBERON:0003295!8.15e-10!23;UBERON:0009722!8.15e-10!23;UBERON:0005562!8.15e-10!23;UBERON:0007690!8.15e-10!23;UBERON:0001007!1.02e-07!128;UBERON:0001555!1.02e-07!128;UBERON:0007026!1.02e-07!128;UBERON:0002204!1.74e-07!32;UBERON:0004119!2.35e-07!130;UBERON:0000925!2.35e-07!130;UBERON:0006595!2.35e-07!130;UBERON:0000072!2.44e-07!27;UBERON:0004921!3.30e-07!126;UBERON:0004185!3.30e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.12e-18,48;UBERON:0002405,5.12e-18,48;UBERON:0002390,8.13e-17,45;UBERON:0003061,8.13e-17,45;UBERON:0003081,8.83e-17,87;UBERON:0000926,2.08e-12,120;UBERON:0004120,2.08e-12,120;UBERON:0006603,2.08e-12,120;UBERON:0004177,4.97e-11,29;UBERON:0005057,4.97e-11,29;UBERON:0003408,2.75e-10,24;UBERON:0000077,2.76e-10,35;UBERON:0006562,4.57e-10,24;UBERON:0001557,4.57e-10,24;UBERON:0001042,4.57e-10,24;UBERON:0008814,4.57e-10,24;UBERON:0009145,4.57e-10,24;UBERON:0002370,8.15e-10,23;UBERON:0000974,8.15e-10,23;UBERON:0004807,8.15e-10,23;UBERON:0005058,8.15e-10,23;UBERON:0003351,8.15e-10,23;UBERON:0009113,8.15e-10,23;UBERON:0003295,8.15e-10,23;UBERON:0009722,8.15e-10,23;UBERON:0005562,8.15e-10,23;UBERON:0007690,8.15e-10,23;UBERON:0001007,1.67e-09,116;UBERON:0001555,1.67e-09,116;UBERON:0007026,1.67e-09,116;UBERON:0004119,4.60e-09,118;UBERON:0000925,4.60e-09,118;UBERON:0006595,4.60e-09,118;UBERON:0004921,6.24e-09,114;UBERON:0002204,1.74e-07,32;UBERON:0000072,2.44e-07,27;UBERON:0005409,9.81e-07,47|phase1_expression=29.1470901730725,143.079917132138,150.149748998547,164.842995162222,151.270510443797,69.6698978434343,67.2804404915114,145.134615548332,85.8811205125167,103.690585160643,42.9757100246018,41.0028897236029,140.898200733382,178.512461739593,45.6360373687458,60.540104949558,60.1623215190206,89.2757927963813,93.6491581527196,90.3949958329804,31.8061905165001,69.205792987017,52.7623574060649,74.2364841761407,74.3286070657631,122.885640320614,103.813641074337,95.0228136144771,113.824028254368,88.4625755457357,71.1754939203528,35.5617177137393,36.9038872550742,31.6963362030877,43.0388913429399,35.2417448160004,32.054588933192,398.442112461536,226.587249911902,269.091204402532,358.232976210888,392.751153851106,341.313778180901,36.5100772129174,35.7860567204886,29.1839335937074,73.5447863687157,55.5964148770139,68.3224028304207,61.8287079056221,33.3167683468363,34.5006154475932,89.2603464227157,62.3811442129756,61.8412590422134,60.7132269044835,58.1662883075676,51.0515371354668,7.68802551266472,3.70293685490423,4.43681982454325,23.7191172448392,28.4574334755565,142.634105189102,157.229751648149,150.621784368573,80.2928296189325,120.644547870968,9.7468235569969,12.2855403881839,7.15104868594699,19.4242669394586,21.2033799313549,8.20688354740192,9.58454710182364,9.19218786610021,8.8092704799511,11.3641730895817,12.595735727012,6.19865552331911,8.23388792421687,7.29278718779464,16.4717969410815,10.6924895906019,14.0574387954665,12.6690291753677,8.68467252874528,7.08317894136142,38.0902752465916,32.7980570863449,80.5823278590664,27.5335640634044,9.51959867190851,4.85732872474035,9.09686984426737,8.06448396775204,43.3973258207113,46.3570477412317,41.3059747318561,42.0474093667305,30.1404918322096,79.562415996877,129.950672250389,142.213340630666,16.8863011988747,13.6814327356553,14.1546844604139,45.9019196470621,93.7355138802762,37.7043033224655,29.1455348967108,35.9269264408327,43.355713484139,38.8864412625766,41.6264023260395,36.0663117116169,53.1469180628904,35.2822430884584,103.499434578135,53.383060482645,62.0564666873706,61.5791571481732,65.2371164263428,15.8101630386235,19.0596503200244,103.204650304271,47.3269741798385,34.7943583976176,53.4965655977602,16.7765516133401,15.5550204958333,7.413606774659,9.90798625095976,12.2743419518559,12.6750707181332,14.2772311499627,29.4315761527414,65.9356944233493,31.084899287342,50.7164872686402,14.4433691688601,13.3343220571414,16.3856538122868,21.0986744970001,19.2543292598258,15.373646434182,20.6143794031403,29.2334808935088,20.6945273215529,23.4491539408096,29.5597888595434,33.3177513289914,39.2046621408093,70.3469376374776,78.6087761078344,19.3063238813938,71.6257451059499,64.3369767786788,64.5051143627995,29.4118597000413,35.4134350571455,25.3887506660031,37.8791576936336,48.0104725463665,43.9661271729028,50.2273320660881,65.7269833429067,69.0083173389972,72.2417741120179,97.5154736629826,117.063360984216,135.527388343283,107.799106607906,95.9575894136658,11.9865270681553,11.6282211988591,200.233782488182,68.2282461991944,14.9301775374664,15.5598570146494,26.9332994163175,33.8828321367215,36.2476211467139,47.3661809020272,92.0586379396352,69.8323568029806,64.341813452869,81.5721535368718,67.0676459689773,73.7031915096462,79.5388023538875,95.5878111620963,29.3985246477277,20.9074778075804,31.5581659884625,25.8637186363549,28.3170631264734,32.6131562489981,33.7050742872291,37.9358080307578,36.2667061313576,44.0527875200828,13.0439155918346,33.702711354651,35.1840601252633,35.303351644422,37.3262623354845,43.6530659151874,43.5410206546228,60.4161888646702,61.1249804941883,32.3982467561936,102.075426634422,38.3305176098558,30.5796919652269,14.9021537988796,12.5578189465339,23.1572890254416,42.6779869284857,18.0016841181961,23.9558515369778,25.9709981236038,38.7238909676028,48.4093084006848,57.1304738126433,59.7108962444864,38.3053400178044,40.0851088264283,46.5607924479862,49.3228577294371,49.9059597592438,45.2751553360131,76.9035548090288,72.3394559478884,36.8823204764277,37.2514607511389,14.6101036888891,20.3948334670434,29.3443552224249,45.6972378239915,17.9839685067266,19.5219372148319,21.1114929778143,22.7020358054924,28.0726329343817,23.4953520554731,27.5271277138928,25.1340037803728,22.1361155650053,8.67567554338879,41.3045647956062,36.5034487517873,30.6227483584723,56.5847521795797,25.2215762845929,23.7925023431882,28.7207379116513,29.0451822824083,40.1610574317851,29.513774202617,48.8429474087938,30.173299546633,39.5712090007041,34.7640433729398,28.4630243152497,27.8465966770104,22.1285743739962,19.2665370613502,29.3644212186853,26.792129378949,26.9557155136256,33.1766000739851,32.0870590174136,45.3652774180753,28.6299483837727,29.6564899209348,42.3414524265527,70.406430006012,81.7009999081282,42.2793603746373,40.5865969610664,35.1261525454431,97.3545994343701,19.0988061070825,77.2336381206294,54.8989068782172,51.8544676635193,63.4801700105809,76.6854617514951,68.6334519619568,56.6028171879538,62.5582991886751,74.4897858805844,42.9601778106801,21.9853515538889,24.8049749894755,34.4537037221546,41.8176592028937,42.1439748030123,38.9757961052132,49.5920734352016,54.1834799906941,93.4523957433827,102.520986659343,15.7834022831573,18.5400517094534,17.8695169693665,21.0007283411571,24.9278459312021,22.6401208157643,29.8087386160215,30.9886435928601,29.8849131613276,16.6693043369944,16.1296803504405,166.221849450422,40.747768273323,44.6792663666999,60.2832618616969,89.8714012250757,110.268151903602,85.6993555077378,104.564185239601,104.601242146281,107.60401099686,107.379887170735,123.089303374307,140.757924319802,147.148019846595,68.699306235409,20.8666796171621,16.1484941897056,17.7957693345923,57.9568782096571,62.3105818497924,62.2715522508701,51.4484109789758,62.6965130044204,9.60078132449013,9.66682996665071,9.73922372846974,10.1393377582776,6.85082519770642,12.8416962556249,8.77529250301348,10.3573876741571,7.25027854374727,11.39072685854,17.3324870465575,27.5327162646711,21.0002335077585,40.3557150333368,31.6515875568253,43.2032244857533,40.2266577320924,35.6440649023287,46.2123661812214,36.8937929175144,38.7823328832067,41.6864214463228,36.2392633908445,40.3998711674725,43.3063435925324,37.6272016113628,43.6883908812105,37.2314795494951,38.3239887747075,33.8557516309114,39.0870947719374,38.6897257427356,41.7263332407812,31.9762116591123,37.9260803073782,37.7381151196877,34.7563148458268,35.5144110441088,36.9387189660744,29.1793981262024,34.048250201638,39.4017929502254,38.0584870147811,34.3959787432844,46.2975866354739,55.7077588801619,44.4470056046276,57.1557003768473,61.4035545940987,63.3097372873009,58.4306945763462|short_description=p1@Tsc22d4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:78829 | |||
|HGNC= | |||
|MCL_coexpression_id=2894 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9EQN3,uniprot:Q8BV82,uniprot:Q3U1U6 | |||
|association_with_transcript=0bp_to_ENSMUST00000100539,NM_023910,NM_029805,uc009adt.1,uc009adu.1,uc009adv.1_5end | |||
|cluster_id=chr5:138187195..138187255,+ | |||
|description=CAGE_peak_1_at_Tsc22d4_5end | |||
|id=chr5:138187195..138187255,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.12e-18!48;UBERON:0003081!3.03e-17!88;UBERON:0002390!8.13e-17!45;UBERON:0003061!8.13e-17!45;UBERON:0004177!4.97e-11!29;UBERON:0003408!2.75e-10!24;UBERON:0006562!4.57e-10!24;UBERON:0001557!4.57e-10!24;UBERON:0001042!4.57e-10!24;UBERON:0008814!4.57e-10!24;UBERON:0009145!4.57e-10!24;UBERON:0002405!4.58e-10!70;UBERON:0002370!8.15e-10!23;UBERON:0000974!8.15e-10!23;UBERON:0004807!8.15e-10!23;UBERON:0005058!8.15e-10!23;UBERON:0003351!8.15e-10!23;UBERON:0009113!8.15e-10!23;UBERON:0003295!8.15e-10!23;UBERON:0009722!8.15e-10!23;UBERON:0005562!8.15e-10!23;UBERON:0007690!8.15e-10!23;UBERON:0001007!1.02e-07!128;UBERON:0001555!1.02e-07!128;UBERON:0007026!1.02e-07!128;UBERON:0002204!1.74e-07!32;UBERON:0004119!2.35e-07!130;UBERON:0000925!2.35e-07!130;UBERON:0006595!2.35e-07!130;UBERON:0000072!2.44e-07!27;UBERON:0004921!3.30e-07!126;UBERON:0004185!3.30e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.12e-18,48;UBERON:0002405,5.12e-18,48;UBERON:0002390,8.13e-17,45;UBERON:0003061,8.13e-17,45;UBERON:0003081,8.83e-17,87;UBERON:0000926,2.08e-12,120;UBERON:0004120,2.08e-12,120;UBERON:0006603,2.08e-12,120;UBERON:0004177,4.97e-11,29;UBERON:0005057,4.97e-11,29;UBERON:0003408,2.75e-10,24;UBERON:0000077,2.76e-10,35;UBERON:0006562,4.57e-10,24;UBERON:0001557,4.57e-10,24;UBERON:0001042,4.57e-10,24;UBERON:0008814,4.57e-10,24;UBERON:0009145,4.57e-10,24;UBERON:0002370,8.15e-10,23;UBERON:0000974,8.15e-10,23;UBERON:0004807,8.15e-10,23;UBERON:0005058,8.15e-10,23;UBERON:0003351,8.15e-10,23;UBERON:0009113,8.15e-10,23;UBERON:0003295,8.15e-10,23;UBERON:0009722,8.15e-10,23;UBERON:0005562,8.15e-10,23;UBERON:0007690,8.15e-10,23;UBERON:0001007,1.67e-09,116;UBERON:0001555,1.67e-09,116;UBERON:0007026,1.67e-09,116;UBERON:0004119,4.60e-09,118;UBERON:0000925,4.60e-09,118;UBERON:0006595,4.60e-09,118;UBERON:0004921,6.24e-09,114;UBERON:0002204,1.74e-07,32;UBERON:0000072,2.44e-07,27;UBERON:0005409,9.81e-07,47 | |||
|phase1_expression=29.1470901730725,143.079917132138,150.149748998547,164.842995162222,151.270510443797,69.6698978434343,67.2804404915114,145.134615548332,85.8811205125167,103.690585160643,42.9757100246018,41.0028897236029,140.898200733382,178.512461739593,45.6360373687458,60.540104949558,60.1623215190206,89.2757927963813,93.6491581527196,90.3949958329804,31.8061905165001,69.205792987017,52.7623574060649,74.2364841761407,74.3286070657631,122.885640320614,103.813641074337,95.0228136144771,113.824028254368,88.4625755457357,71.1754939203528,35.5617177137393,36.9038872550742,31.6963362030877,43.0388913429399,35.2417448160004,32.054588933192,398.442112461536,226.587249911902,269.091204402532,358.232976210888,392.751153851106,341.313778180901,36.5100772129174,35.7860567204886,29.1839335937074,73.5447863687157,55.5964148770139,68.3224028304207,61.8287079056221,33.3167683468363,34.5006154475932,89.2603464227157,62.3811442129756,61.8412590422134,60.7132269044835,58.1662883075676,51.0515371354668,7.68802551266472,3.70293685490423,4.43681982454325,23.7191172448392,28.4574334755565,142.634105189102,157.229751648149,150.621784368573,80.2928296189325,120.644547870968,9.7468235569969,12.2855403881839,7.15104868594699,19.4242669394586,21.2033799313549,8.20688354740192,9.58454710182364,9.19218786610021,8.8092704799511,11.3641730895817,12.595735727012,6.19865552331911,8.23388792421687,7.29278718779464,16.4717969410815,10.6924895906019,14.0574387954665,12.6690291753677,8.68467252874528,7.08317894136142,38.0902752465916,32.7980570863449,80.5823278590664,27.5335640634044,9.51959867190851,4.85732872474035,9.09686984426737,8.06448396775204,43.3973258207113,46.3570477412317,41.3059747318561,42.0474093667305,30.1404918322096,79.562415996877,129.950672250389,142.213340630666,16.8863011988747,13.6814327356553,14.1546844604139,45.9019196470621,93.7355138802762,37.7043033224655,29.1455348967108,35.9269264408327,43.355713484139,38.8864412625766,41.6264023260395,36.0663117116169,53.1469180628904,35.2822430884584,103.499434578135,53.383060482645,62.0564666873706,61.5791571481732,65.2371164263428,15.8101630386235,19.0596503200244,103.204650304271,47.3269741798385,34.7943583976176,53.4965655977602,16.7765516133401,15.5550204958333,7.413606774659,9.90798625095976,12.2743419518559,12.6750707181332,14.2772311499627,29.4315761527414,65.9356944233493,31.084899287342,50.7164872686402,14.4433691688601,13.3343220571414,16.3856538122868,21.0986744970001,19.2543292598258,15.373646434182,20.6143794031403,29.2334808935088,20.6945273215529,23.4491539408096,29.5597888595434,33.3177513289914,39.2046621408093,70.3469376374776,78.6087761078344,19.3063238813938,71.6257451059499,64.3369767786788,64.5051143627995,29.4118597000413,35.4134350571455,25.3887506660031,37.8791576936336,48.0104725463665,43.9661271729028,50.2273320660881,65.7269833429067,69.0083173389972,72.2417741120179,97.5154736629826,117.063360984216,135.527388343283,107.799106607906,95.9575894136658,11.9865270681553,11.6282211988591,200.233782488182,68.2282461991944,14.9301775374664,15.5598570146494,26.9332994163175,33.8828321367215,36.2476211467139,47.3661809020272,92.0586379396352,69.8323568029806,64.341813452869,81.5721535368718,67.0676459689773,73.7031915096462,79.5388023538875,95.5878111620963,29.3985246477277,20.9074778075804,31.5581659884625,25.8637186363549,28.3170631264734,32.6131562489981,33.7050742872291,37.9358080307578,36.2667061313576,44.0527875200828,13.0439155918346,33.702711354651,35.1840601252633,35.303351644422,37.3262623354845,43.6530659151874,43.5410206546228,60.4161888646702,61.1249804941883,32.3982467561936,102.075426634422,38.3305176098558,30.5796919652269,14.9021537988796,12.5578189465339,23.1572890254416,42.6779869284857,18.0016841181961,23.9558515369778,25.9709981236038,38.7238909676028,48.4093084006848,57.1304738126433,59.7108962444864,38.3053400178044,40.0851088264283,46.5607924479862,49.3228577294371,49.9059597592438,45.2751553360131,76.9035548090288,72.3394559478884,36.8823204764277,37.2514607511389,14.6101036888891,20.3948334670434,29.3443552224249,45.6972378239915,17.9839685067266,19.5219372148319,21.1114929778143,22.7020358054924,28.0726329343817,23.4953520554731,27.5271277138928,25.1340037803728,22.1361155650053,8.67567554338879,41.3045647956062,36.5034487517873,30.6227483584723,56.5847521795797,25.2215762845929,23.7925023431882,28.7207379116513,29.0451822824083,40.1610574317851,29.513774202617,48.8429474087938,30.173299546633,39.5712090007041,34.7640433729398,28.4630243152497,27.8465966770104,22.1285743739962,19.2665370613502,29.3644212186853,26.792129378949,26.9557155136256,33.1766000739851,32.0870590174136,45.3652774180753,28.6299483837727,29.6564899209348,42.3414524265527,70.406430006012,81.7009999081282,42.2793603746373,40.5865969610664,35.1261525454431,97.3545994343701,19.0988061070825,77.2336381206294,54.8989068782172,51.8544676635193,63.4801700105809,76.6854617514951,68.6334519619568,56.6028171879538,62.5582991886751,74.4897858805844,42.9601778106801,21.9853515538889,24.8049749894755,34.4537037221546,41.8176592028937,42.1439748030123,38.9757961052132,49.5920734352016,54.1834799906941,93.4523957433827,102.520986659343,15.7834022831573,18.5400517094534,17.8695169693665,21.0007283411571,24.9278459312021,22.6401208157643,29.8087386160215,30.9886435928601,29.8849131613276,16.6693043369944,16.1296803504405,166.221849450422,40.747768273323,44.6792663666999,60.2832618616969,89.8714012250757,110.268151903602,85.6993555077378,104.564185239601,104.601242146281,107.60401099686,107.379887170735,123.089303374307,140.757924319802,147.148019846595,68.699306235409,20.8666796171621,16.1484941897056,17.7957693345923,57.9568782096571,62.3105818497924,62.2715522508701,51.4484109789758,62.6965130044204,9.60078132449013,9.66682996665071,9.73922372846974,10.1393377582776,6.85082519770642,12.8416962556249,8.77529250301348,10.3573876741571,7.25027854374727,11.39072685854,17.3324870465575,27.5327162646711,21.0002335077585,40.3557150333368,31.6515875568253,43.2032244857533,40.2266577320924,35.6440649023287,46.2123661812214,36.8937929175144,38.7823328832067,41.6864214463228,36.2392633908445,40.3998711674725,43.3063435925324,37.6272016113628,43.6883908812105,37.2314795494951,38.3239887747075,33.8557516309114,39.0870947719374,38.6897257427356,41.7263332407812,31.9762116591123,37.9260803073782,37.7381151196877,34.7563148458268,35.5144110441088,36.9387189660744,29.1793981262024,34.048250201638,39.4017929502254,38.0584870147811,34.3959787432844,46.2975866354739,55.7077588801619,44.4470056046276,57.1557003768473,61.4035545940987,63.3097372873009,58.4306945763462 | |||
|short_description=p1@Tsc22d4 | |||
}} |
Revision as of 21:51, 3 August 2015
Short description: | p1@Tsc22d4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tsc22d4_5end |
Coexpression cluster: | MCL_coexpression_mm9:2894 |
Association with transcript: | 0bp_to_ENSMUST00000100539, NM_023910, NM_029805, uc009adt.1, uc009adu.1, uc009adv.1_5end |
EntrezGene: | 78829 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data