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FFCP PHASE1:Mm9::chr7:112630367..112630418,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=1133
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr7:112630367..112630418,-
|description=CAGE_peak_at_chr7:112630367..112630418,-
|description=CAGE_peak_at_chr7:112630367..112630418,-
|id=chr7:112630367..112630418,-
|id=chr7:112630367..112630418,-
|ontology_enrichment_celltype=CL:0000055!1.61e-08!50;CL:0000221!8.42e-08!44;CL:0000133!8.42e-08!44;CL:0002319!2.27e-07!43;CL:0000333!5.12e-07!10;CL:0000095!5.12e-07!10;CL:0000243!5.12e-07!10;CL:0000123!5.12e-07!10;CL:0000125!5.12e-07!10;CL:0000030!5.12e-07!10;CL:0000339!5.12e-07!10;CL:0000117!8.30e-07!23;CL:0000337!8.30e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000221,3.44e-09,44;CL:0000133,3.44e-09,44;CL:0002319,1.16e-08,43;CL:0000333,2.53e-08,10;CL:0000095,2.53e-08,10;CL:0000243,2.53e-08,10;CL:0000123,2.53e-08,10;CL:0000125,2.53e-08,10;CL:0000030,2.53e-08,10;CL:0000339,2.53e-08,10;CL:0002453,1.27e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.46e-18!75;UBERON:0001016!4.46e-18!75;UBERON:0001017!2.74e-17!73;UBERON:0005743!2.74e-17!73;UBERON:0001049!2.65e-16!52;UBERON:0005068!2.65e-16!52;UBERON:0006241!2.65e-16!52;UBERON:0007135!2.65e-16!52;UBERON:0004121!3.29e-16!102;UBERON:0000924!3.29e-16!102;UBERON:0006601!3.29e-16!102;UBERON:0000955!7.03e-16!50;UBERON:0006238!7.03e-16!50;UBERON:0002616!2.76e-15!49;UBERON:0000033!7.99e-15!63;UBERON:0002020!5.32e-13!34;UBERON:0002346!1.47e-12!71;UBERON:0003075!1.47e-12!71;UBERON:0007284!1.47e-12!71;UBERON:0004111!6.90e-12!122;UBERON:0000025!4.60e-11!114;UBERON:0002791!5.31e-11!29;UBERON:0003528!5.31e-11!29;UBERON:0001893!5.31e-11!29;UBERON:0003080!2.44e-10!40;UBERON:0002780!9.26e-10!39;UBERON:0001890!9.26e-10!39;UBERON:0006240!9.26e-10!39;UBERON:0003056!1.68e-09!49;UBERON:0002619!3.16e-08!17;UBERON:0000956!3.40e-08!21;UBERON:0001869!3.40e-08!21;UBERON:0000203!3.40e-08!21;UBERON:0003076!2.62e-07!12;UBERON:0003057!2.62e-07!12;UBERON:0002021!4.69e-07!10;UBERON:0000411!4.69e-07!10;UBERON:0001950!4.69e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.99e-20,75;UBERON:0001017,1.80e-19,73;UBERON:0000073,8.85e-18,54;UBERON:0001049,1.78e-16,52;UBERON:0005068,1.78e-16,52;UBERON:0006241,1.78e-16,52;UBERON:0007135,1.78e-16,52;UBERON:0004121,5.63e-16,95;UBERON:0000924,5.63e-16,95;UBERON:0006601,5.63e-16,95;UBERON:0010314,4.39e-15,92;UBERON:0000955,6.21e-14,47;UBERON:0006238,6.21e-14,47;UBERON:0002020,8.40e-14,34;UBERON:0002616,2.87e-13,46;UBERON:0002346,2.25e-12,64;UBERON:0003075,2.25e-12,64;UBERON:0007284,2.25e-12,64;UBERON:0010371,3.67e-12,73;UBERON:0004111,3.99e-12,122;UBERON:0003528,2.22e-11,29;UBERON:0002791,2.22e-11,29;UBERON:0001893,2.22e-11,29;UBERON:0000025,3.29e-11,114;UBERON:0003080,1.35e-09,40;UBERON:0002780,6.00e-09,39;UBERON:0001890,6.00e-09,39;UBERON:0006240,6.00e-09,39;UBERON:0003076,1.10e-08,12;UBERON:0003057,1.10e-08,12;UBERON:0002021,2.27e-08,10;UBERON:0000411,2.27e-08,10;UBERON:0001950,2.27e-08,10;UBERON:0002619,3.68e-08,17;UBERON:0000956,5.60e-08,21;UBERON:0001869,5.60e-08,21;UBERON:0000203,5.60e-08,21;UBERON:0003056,1.12e-07,49
|phase1_expression=4.32401887182944,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,1.27564935226605,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,2.53442328048786,2.20256102594018,3.12956537739216,18.7501634487184,16.2567775223509,10.8880743481599,3.21968769738334,15.8127820801469,0,0,0,3.8588915405392,3.15186783932632,1.03134418455488,3.03474691289397,4.23192783417626,1.90149421051854,1.69422266034566,1.77858959222228,0.899899717281399,0,0.7104801149461,8.38880309451533,22.6688800139717,0.518448061542388,1.21505344498522,1.05162480675691,2.28520787523043,3.53389665522582,0.734944795289724,0.575072826109418,0.919218786610021,7.70811166995721,4.21368215681119,6.91229399653096,2.50583946687368,2.47016637726506,1.04182674111352,1.3959149950069,8.4414391504752,4.5839474333043,5.00868595305235,2.27794689278565,1.86399445825301,1.96888102666279,2.79614772395106,0.579728977403356,0,0,0,0,0,1.12355536105401,5.79463096765396,2.33807404142582,2.47337702157238,4.3661460130771,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.34255163915718,0,0.742210695324124,0.867426633830679,1.21786191324856,1.38369298353635,0.60289056221049,0.117588707135705,1.25666591329675,0.494389935468748,1.59059292611903,0,2.10296904931632,0.441683036920787,0.484875253135222,3.72783522436244,4.39171195517321,3.35114730901528,0.510914110417183,0,0,0,8.53806644607489,4.11750542536764,2.76439574648302,4.69325664519146,3.58001640262463,7.06479351502504,4.38051410282946,1.83310854930569,1.11966273549084,1.76905930903572,1.47309299120532,0.130120442962704,0.689706313300419,0.720248519221397,1.20563854268572,0.612328492361951,0.768682321709099,1.03071897015702,1.03481348295606,0,0.189106080167819,0.351902248327898,0.43839146485515,0.556094498451196,1.0447564995665,2.26360350048738,0.398068533636986,0,0,0,1.03562886267751,2.11073453982987,2.16074473753218,1.89395788468168,2.16440654922144,1.85120535464854,3.25547522650571,1.87791380979733,0.934122738937356,1.6455984991348,1.47750717671186,0.810688095458557,1.16959989940266,1.3173006917463,0.805238512562231,5.67782861123144,2.88132914661996,0,0.528901133327089,0,1.16118335930219,0.644337306610467,0.403367049246685,0.444756087689741,0,0,0.494096864172033,0.251335208800269,0.397912944082302,0.19496408711912,0,0.648414149624083,0.597423819763102,0.189667900953082,0.228497025219458,0,0.610953983535943,0.387904974335251,0.49095073923223,0.505892296994058,0.295220295959204,0.470996183524124,0.493588655687202,0,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,1.29327233116623,1.32643988239339,0.651859905768103,1.18821560042632,0.704070744865506,0.670025029767263,0.714130922658041,0.585400943573396,1.10344600874334,1.32878813789265,0.956728611944923,1.80249646187312,1.72684981865896,0.723245292907558,0,0,0.491764273019036,0.275936746304732,9.63303539926752,6.91548950893999,3.11476396215683,1.00988370881749,0,0,0,0.238968797952552,0.222798674082394,1.13230612315533,0,0,0.395287777946524,6.10510501201433,1.41940085208269,1.06839362200353,0.977321756121456,1.97964147567043,0,0.485561272309963,0,0.754420319023592,0.590603785761546,0.307435147943927,0.516856586336442,0.727067458955011,0.712994756769443,0.632073515871632,0,0,5.10659408630682,0,0.646793418913773,0.428674070063185,0.532020700926821,0.713475270408282,0.329098041204242,0.608929898229199,2.81606049676452,0.847328283455281,0.220528398054962,0.65954501176592,1.29171541356724,1.08563264870681,1.55184047204077,0.492422699235184,0.291480836629851,9.6421157045465,0.341741761595705,1.65109494370578,0.740778109478847,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0.138199973804424,1.90934123603023,0.158167996790568,0.609958401380546,0.108005340821801,0.627264888043406,0.87345025498471,1.61837215661785,0.991841468704031,2.09404753587224,0.388844919875379,0,0,0.448549638131936,0,1.16670713006429,0.774958940866387,1.01373675294467,0.58678619322877,0.651021924219751,0.314578033277133,0.241584120826006,0.576060012515731,0,0.405450430580328,0.718976700153791,0.129920822977795,0.358053391334963,0,0,0,0,0.228620419965,0,0.0974578807397524,0.288635524920988,0,0.680191150845634,0,0.0897138566094757,0.167884616364078,1.54551675225752,2.25218970541418,2.38097111547445,1.71494703263253,2.00628841614145,7.90652579663893,8.28585425712918,3.43737308063638,4.1244763762485,8.22099023724771,6.7985450765073,5.40018000185445,3.60256962579376,4.07828168085784,8.28416498802912,0.207574695168353,0.798049746802062,0.682934423016537,0.486213434136588,1.25767897576789,2.5738091183002,1.33348036680969,1.44224540067226,1.92551525755089,2.02157769411038,0.760437899670719,0.943131706930381,1.591905626988,1.53660365771686,1.49332219284595,1.90517476513229,1.62238056322798,1.54327376370964,0.824171801606613,1.91358596174717,1.71434626192708,1.59728225543404,1.43061713968393,1.30811774969096,1.12931256498397,1.4384483341585,0.73171189149109,1.3153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|phase1_expression=4.32401887182944,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,1.27564935226605,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,2.53442328048786,2.20256102594018,3.12956537739216,18.7501634487184,16.2567775223509,10.8880743481599,3.21968769738334,15.8127820801469,0,0,0,3.8588915405392,3.15186783932632,1.03134418455488,3.03474691289397,4.23192783417626,1.90149421051854,1.69422266034566,1.77858959222228,0.899899717281399,0,0.7104801149461,8.38880309451533,22.6688800139717,0.518448061542388,1.21505344498522,1.05162480675691,2.28520787523043,3.53389665522582,0.734944795289724,0.575072826109418,0.919218786610021,7.70811166995721,4.21368215681119,6.91229399653096,2.50583946687368,2.47016637726506,1.04182674111352,1.3959149950069,8.4414391504752,4.5839474333043,5.00868595305235,2.27794689278565,1.86399445825301,1.96888102666279,2.79614772395106,0.579728977403356,0,0,0,0,0,1.12355536105401,5.79463096765396,2.33807404142582,2.47337702157238,4.3661460130771,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.34255163915718,0,0.742210695324124,0.867426633830679,1.21786191324856,1.38369298353635,0.60289056221049,0.117588707135705,1.25666591329675,0.494389935468748,1.59059292611903,0,2.10296904931632,0.441683036920787,0.484875253135222,3.72783522436244,4.39171195517321,3.35114730901528,0.510914110417183,0,0,0,8.53806644607489,4.11750542536764,2.76439574648302,4.69325664519146,3.58001640262463,7.06479351502504,4.38051410282946,1.83310854930569,1.11966273549084,1.76905930903572,1.47309299120532,0.130120442962704,0.689706313300419,0.720248519221397,1.20563854268572,0.612328492361951,0.768682321709099,1.03071897015702,1.03481348295606,0,0.189106080167819,0.351902248327898,0.43839146485515,0.556094498451196,1.0447564995665,2.26360350048738,0.398068533636986,0,0,0,1.03562886267751,2.11073453982987,2.16074473753218,1.89395788468168,2.16440654922144,1.85120535464854,3.25547522650571,1.87791380979733,0.934122738937356,1.6455984991348,1.47750717671186,0.810688095458557,1.16959989940266,1.3173006917463,0.805238512562231,5.67782861123144,2.88132914661996,0,0.528901133327089,0,1.16118335930219,0.644337306610467,0.403367049246685,0.444756087689741,0,0,0.494096864172033,0.251335208800269,0.397912944082302,0.19496408711912,0,0.648414149624083,0.597423819763102,0.189667900953082,0.228497025219458,0,0.610953983535943,0.387904974335251,0.49095073923223,0.505892296994058,0.295220295959204,0.470996183524124,0.493588655687202,0,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,1.29327233116623,1.32643988239339,0.651859905768103,1.18821560042632,0.704070744865506,0.670025029767263,0.714130922658041,0.585400943573396,1.10344600874334,1.32878813789265,0.956728611944923,1.80249646187312,1.72684981865896,0.723245292907558,0,0,0.491764273019036,0.275936746304732,9.63303539926752,6.91548950893999,3.11476396215683,1.00988370881749,0,0,0,0.238968797952552,0.222798674082394,1.13230612315533,0,0,0.395287777946524,6.10510501201433,1.41940085208269,1.06839362200353,0.977321756121456,1.97964147567043,0,0.485561272309963,0,0.754420319023592,0.590603785761546,0.307435147943927,0.516856586336442,0.727067458955011,0.712994756769443,0.632073515871632,0,0,5.10659408630682,0,0.646793418913773,0.428674070063185,0.532020700926821,0.713475270408282,0.329098041204242,0.608929898229199,2.81606049676452,0.847328283455281,0.220528398054962,0.65954501176592,1.29171541356724,1.08563264870681,1.55184047204077,0.492422699235184,0.291480836629851,9.6421157045465,0.341741761595705,1.65109494370578,0.740778109478847,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0.138199973804424,1.90934123603023,0.158167996790568,0.609958401380546,0.108005340821801,0.627264888043406,0.87345025498471,1.61837215661785,0.991841468704031,2.09404753587224,0.388844919875379,0,0,0.448549638131936,0,1.16670713006429,0.774958940866387,1.01373675294467,0.58678619322877,0.651021924219751,0.314578033277133,0.241584120826006,0.576060012515731,0,0.405450430580328,0.718976700153791,0.129920822977795,0.358053391334963,0,0,0,0,0.228620419965,0,0.0974578807397524,0.288635524920988,0,0.680191150845634,0,0.0897138566094757,0.167884616364078,1.54551675225752,2.25218970541418,2.38097111547445,1.71494703263253,2.00628841614145,7.90652579663893,8.28585425712918,3.43737308063638,4.1244763762485,8.22099023724771,6.7985450765073,5.40018000185445,3.60256962579376,4.07828168085784,8.28416498802912,0.207574695168353,0.798049746802062,0.682934423016537,0.486213434136588,1.25767897576789,2.5738091183002,1.33348036680969,1.44224540067226,1.92551525755089,2.02157769411038,0.760437899670719,0.943131706930381,1.591905626988,1.53660365771686,1.49332219284595,1.90517476513229,1.62238056322798,1.54327376370964,0.824171801606613,1.91358596174717,1.71434626192708,1.59728225543404,1.43061713968393,1.30811774969096,1.12931256498397,1.4384483341585,0.73171189149109,1.3153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|short_description=p@chr7:112630367..112630418,-
|short_description=p@chr7:112630367..112630418,-
}}
}}

Latest revision as of 23:48, 3 August 2015

Short description:p@chr7:112630367..112630418, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr7:112630367..112630418, -
Coexpression cluster:MCL_coexpression_mm9:1133
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr7:112630367..112630418-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.53
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C218.75
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B816.26
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C88.39
Mouse Microglia, donor2.CNhs12634.11736-123E822.67
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.58
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D91.97
Mouse Schwann, donor2.CNhs12573.11746-123F92.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.54
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F27.06
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C29.63
medulla oblongata, neonate N30.CNhs11200.1396-42A36.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C99.64
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system1.99e-2075
central nervous system1.80e-1973
regional part of nervous system8.85e-1854
neural tube1.78e-1652
neural rod1.78e-1652
future spinal cord1.78e-1652
neural keel1.78e-1652
ectoderm-derived structure5.63e-1695
ectoderm5.63e-1695
presumptive ectoderm5.63e-1695
structure with developmental contribution from neural crest4.39e-1592
brain6.21e-1447
future brain6.21e-1447
gray matter8.40e-1434
regional part of brain2.87e-1346
neurectoderm2.25e-1264
neural plate2.25e-1264
presumptive neural plate2.25e-1264
ecto-epithelium3.67e-1273
anatomical conduit3.99e-12122
brain grey matter2.22e-1129
regional part of telencephalon2.22e-1129
telencephalon2.22e-1129
tube3.29e-11114
anterior neural tube1.35e-0940
regional part of forebrain6.00e-0939
forebrain6.00e-0939
future forebrain6.00e-0939
posterior neural tube1.10e-0812
chordal neural plate1.10e-0812
occipital lobe2.27e-0810
visual cortex2.27e-0810
neocortex2.27e-0810
regional part of cerebral cortex3.68e-0817
cerebral cortex5.60e-0821
cerebral hemisphere5.60e-0821
pallium5.60e-0821
pre-chordal neural plate1.12e-0749
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