FFCP PHASE1:Mm9::chr14:122775017..122775037,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:122775017..122775037,+ | |||
|description=CAGE_peak_at_chr14:122775017..122775037,+ | |description=CAGE_peak_at_chr14:122775017..122775037,+ | ||
|id=chr14:122775017..122775037,+ | |id=chr14:122775017..122775037,+ | ||
|ontology_enrichment_celltype=CL:0002613!1.10e-09!3;CL:0002604!4.85e-07!2;CL:0002605!4.85e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.75e-35,2;CL:0002604,4.75e-35,2;CL:0000128,1.27e-26,6;CL:0000126,1.27e-26,6;CL:0000127,1.27e-26,6;CL:0002613,2.28e-24,3;CL:0002453,3.25e-20,8;CL:0000333,2.34e-16,10;CL:0000095,2.34e-16,10;CL:0000243,2.34e-16,10;CL:0000123,2.34e-16,10;CL:0000125,2.34e-16,10;CL:0000030,2.34e-16,10;CL:0000339,2.34e-16,10;CL:0002319,9.33e-11,43;CL:0000221,1.59e-10,44;CL:0000133,1.59e-10,44;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.39e-12!49;UBERON:0001894!4.96e-09!10;UBERON:0006222!4.96e-09!10;UBERON:0000033!8.97e-09!63;UBERON:0002346!2.19e-08!71;UBERON:0003075!2.19e-08!71;UBERON:0007284!2.19e-08!71;UBERON:0000007!3.86e-08!8;UBERON:0003296!3.86e-08!8;UBERON:0010133!3.86e-08!8;UBERON:0002780!8.46e-08!39;UBERON:0001890!8.46e-08!39;UBERON:0006240!8.46e-08!39;UBERON:0003080!1.52e-07!40;UBERON:0004121!3.47e-07!102;UBERON:0000924!3.47e-07!102;UBERON:0006601!3.47e-07!102;UBERON:0000970!4.61e-07!9;UBERON:0000019!4.61e-07!9;UBERON:0000047!4.61e-07!9;UBERON:0004088!4.61e-07!9;UBERON:0002104!4.61e-07!9;UBERON:0001456!4.61e-07!9;UBERON:0003072!4.61e-07!9;UBERON:0003071!4.61e-07!9;UBERON:0004128!4.61e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,4.39e-15,5;UBERON:0002435,4.39e-15,5;UBERON:0000204,4.39e-15,5;UBERON:0010082,4.39e-15,5;UBERON:0001954,7.87e-11,7;UBERON:0003022,7.87e-11,7;UBERON:0002421,7.87e-11,7;UBERON:0000349,7.87e-11,7;UBERON:0002600,7.87e-11,7;UBERON:0003528,2.92e-10,29;UBERON:0002791,2.92e-10,29;UBERON:0001893,2.92e-10,29;UBERON:0002420,8.03e-10,8;UBERON:0007245,8.03e-10,8;UBERON:0010009,8.03e-10,8;UBERON:0010011,8.03e-10,8;UBERON:0000454,8.03e-10,8;UBERON:0002020,7.62e-09,34;UBERON:0002780,8.71e-08,39;UBERON:0001890,8.71e-08,39;UBERON:0006240,8.71e-08,39;UBERON:0003080,1.32e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09843091367236,1.1665793944457,0,2.87505128729943,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63772575460388,4.02545631850602,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0.780722657776222,0.459804208866946,0.180062129805349,0.150704817835715,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.646793418913773,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93408612825759,0,0.341467211508268,0.486213434136588,0,0.183843508450014,0,0,0,0.505394423527595,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0.548783918618318,0,0.407412341537585,0,0.474540072496697,0,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09843091367236,1.1665793944457,0,2.87505128729943,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63772575460388,4.02545631850602,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0.780722657776222,0.459804208866946,0.180062129805349,0.150704817835715,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.646793418913773,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93408612825759,0,0.341467211508268,0.486213434136588,0,0.183843508450014,0,0,0,0.505394423527595,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0.548783918618318,0,0.407412341537585,0,0.474540072496697,0,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr14:122775017..122775037,+ | |short_description=p@chr14:122775017..122775037,+ | ||
}} | }} |
Latest revision as of 00:45, 4 August 2015
Short description: | p@chr14:122775017..122775037, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:122775017..122775037, + |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.75e-35 | 2 |
astrocyte of the hippocampus | 4.75e-35 | 2 |
oligodendrocyte | 1.27e-26 | 6 |
macroglial cell | 1.27e-26 | 6 |
astrocyte | 1.27e-26 | 6 |
striatum neuron | 2.28e-24 | 3 |
oligodendrocyte precursor cell | 3.25e-20 | 8 |
migratory neural crest cell | 2.34e-16 | 10 |
neuron associated cell | 2.34e-16 | 10 |
glial cell (sensu Vertebrata) | 2.34e-16 | 10 |
neuron associated cell (sensu Vertebrata) | 2.34e-16 | 10 |
glial cell | 2.34e-16 | 10 |
glioblast | 2.34e-16 | 10 |
glioblast (sensu Vertebrata) | 2.34e-16 | 10 |
neural cell | 9.33e-11 | 43 |
ectodermal cell | 1.59e-10 | 44 |
neurectodermal cell | 1.59e-10 | 44 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 4.39e-15 | 5 |
striatum | 4.39e-15 | 5 |
ventral part of telencephalon | 4.39e-15 | 5 |
future corpus striatum | 4.39e-15 | 5 |
Ammon's horn | 7.87e-11 | 7 |
lobe parts of cerebral cortex | 7.87e-11 | 7 |
hippocampal formation | 7.87e-11 | 7 |
limbic system | 7.87e-11 | 7 |
limbic lobe | 7.87e-11 | 7 |
brain grey matter | 2.92e-10 | 29 |
regional part of telencephalon | 2.92e-10 | 29 |
telencephalon | 2.92e-10 | 29 |
basal ganglion | 8.03e-10 | 8 |
nuclear complex of neuraxis | 8.03e-10 | 8 |
aggregate regional part of brain | 8.03e-10 | 8 |
collection of basal ganglia | 8.03e-10 | 8 |
cerebral subcortex | 8.03e-10 | 8 |
gray matter | 7.62e-09 | 34 |
regional part of forebrain | 8.71e-08 | 39 |
forebrain | 8.71e-08 | 39 |
future forebrain | 8.71e-08 | 39 |
anterior neural tube | 1.32e-07 | 40 |