FFCP PHASE1:Mm9::chr8:73222216..73222226,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr8:73222216..73222226,- to FFCP PHASE1:Mm9::chr8:73222216..73222226,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=366 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:73222216..73222226,- | |||
|description=CAGE_peak_at_chr8:73222216..73222226,- | |||
|id=chr8:73222216..73222226,- | |||
|ontology_enrichment_celltype=CL:0002563!7.84e-16!9;CL:0002251!7.84e-16!9;CL:0000063!1.26e-14!66;CL:0000838!6.45e-13!12;CL:0000066!1.61e-12!25;CL:0000223!6.84e-12!20;CL:0000542!8.82e-12!13;CL:0000051!8.82e-12!13;CL:0000084!4.29e-11!11;CL:0000827!4.29e-11!11;CL:0000075!4.96e-11!7;CL:0002076!5.45e-11!15;CL:0000239!1.46e-09!6;CL:0000677!1.46e-09!6;CL:0000212!1.46e-09!6;CL:0000584!1.46e-09!6;CL:0000624!5.21e-09!8;CL:0000738!1.39e-08!17;CL:0002087!1.39e-08!17;CL:0000893!1.95e-08!6;CL:0002489!1.95e-08!6;CL:0000898!1.95e-08!6;CL:0000809!1.95e-08!6;CL:0000810!1.95e-08!6;CL:0000895!1.95e-08!6;CL:0000808!1.95e-08!6;CL:0000894!1.95e-08!6;CL:0000806!1.95e-08!6;CL:0000807!1.95e-08!6;CL:0000805!1.95e-08!6;CL:0002425!1.95e-08!6;CL:0002436!1.95e-08!6;CL:0002427!1.95e-08!6;CL:0002428!1.95e-08!6;CL:0002429!1.95e-08!6;CL:0002433!1.95e-08!6;CL:0002431!1.95e-08!6;CL:0002432!1.95e-08!6;CL:0002250!4.85e-08!3;CL:0000791!6.39e-08!9;CL:0000789!6.39e-08!9;CL:0002420!6.39e-08!9;CL:0002419!6.39e-08!9;CL:0000790!6.39e-08!9;CL:0000144!2.71e-07!121;CL:0000012!2.71e-07!121;CL:0000988!8.40e-07!32;CL:0002032!8.40e-07!32;CL:0000037!8.40e-07!32;CL:0000566!8.40e-07!32;CL:0000837!8.40e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,3.73e-38,3;CL:0002563,9.69e-35,9;CL:0002251,9.69e-35,9;CL:0000223,1.01e-22,20;CL:0002076,4.73e-21,15;CL:0000066,3.00e-18,25;CL:0000213,3.62e-14,1;CL:0002078,3.62e-14,1;CL:0000115,3.62e-14,1;CL:0002262,3.62e-14,1;CL:1000398,3.62e-14,1;CL:0000815,1.55e-13,1;CL:0000792,1.55e-13,1;CL:0000239,3.47e-09,6;CL:0000677,3.47e-09,6;CL:0000584,3.47e-09,6;CL:0000075,5.24e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!3.98e-19!11;UBERON:0003350!7.84e-16!9;UBERON:0004808!7.84e-16!9;UBERON:0001277!7.84e-16!9;UBERON:0001242!5.87e-13!13;UBERON:0000060!5.87e-13!13;UBERON:0001262!5.87e-13!13;UBERON:0004786!5.87e-13!13;UBERON:0000344!5.76e-11!15;UBERON:0003929!1.21e-08!55;UBERON:0000490!2.37e-08!66;UBERON:0005911!7.66e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,9.69e-35,9;UBERON:0004808,9.69e-35,9;UBERON:0001277,9.69e-35,9;UBERON:0000485,1.59e-28,11;UBERON:0001242,3.24e-24,13;UBERON:0001262,3.24e-24,13;UBERON:0004786,3.24e-24,13;UBERON:0000344,4.73e-21,15;UBERON:0002394,3.62e-14,1;UBERON:0001281,3.62e-14,1;UBERON:0000353,3.62e-14,1;UBERON:0003497,3.62e-14,1;UBERON:0003909,3.62e-14,1;UBERON:0003928,3.62e-14,1;UBERON:0003835,3.62e-14,1;UBERON:0003513,3.62e-14,1;UBERON:0001280,3.62e-14,1;UBERON:0004647,3.62e-14,1;UBERON:0002294,3.62e-14,1;UBERON:0001173,3.62e-14,1;UBERON:0004912,3.62e-14,1;UBERON:0005171,3.62e-14,1;UBERON:0004923,2.61e-13,24;UBERON:0000160,2.23e-10,31;UBERON:0003929,2.06e-08,55;UBERON:0000490,5.00e-07,66;UBERON:0005409,6.30e-07,47 | |||
|phase1_expression=0.320297694209588,0,0.454999239389536,1.51232105653415,1.00179145989269,0.503637815735669,0.700837921786577,1.16210991097419,0.563154888606667,0.234064526321993,0,0.0797721589953364,0.342401459862411,0.437102012094987,0,0,0,0,0,0,0,0.198581902401771,0.522399578277871,0,0,0,0,0,0.190023419456374,0,0,0,0,0,4.91047753577167,1.16364251750945,5.71674197534634,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.69593466105033,0,0,0.539703191637817,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.320297694209588,0,0.454999239389536,1.51232105653415,1.00179145989269,0.503637815735669,0.700837921786577,1.16210991097419,0.563154888606667,0.234064526321993,0,0.0797721589953364,0.342401459862411,0.437102012094987,0,0,0,0,0,0,0,0.198581902401771,0.522399578277871,0,0,0,0,0,0.190023419456374,0,0,0,0,0,4.91047753577167,1.16364251750945,5.71674197534634,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.69593466105033,0,0,0.539703191637817,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:73222216..73222226,- | |||
}} | }} |
Latest revision as of 01:13, 4 August 2015
Short description: | p@chr8:73222216..73222226, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:73222216..73222226, - |
Coexpression cluster: | MCL_coexpression_mm9:366 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 3.73e-38 | 3 |
intestinal epithelial cell | 9.69e-35 | 9 |
epithelial cell of alimentary canal | 9.69e-35 | 9 |
endodermal cell | 1.01e-22 | 20 |
endo-epithelial cell | 4.73e-21 | 15 |
epithelial cell | 3.00e-18 | 25 |
lining cell | 3.62e-14 | 1 |
meso-epithelial cell | 3.62e-14 | 1 |
endothelial cell | 3.62e-14 | 1 |
endothelial cell of sinusoid | 3.62e-14 | 1 |
endothelial cell of hepatic sinusoid | 3.62e-14 | 1 |
regulatory T cell | 1.55e-13 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.55e-13 | 1 |
brush border epithelial cell | 3.47e-09 | 6 |
gut absorptive cell | 3.47e-09 | 6 |
enterocyte | 3.47e-09 | 6 |
columnar/cuboidal epithelial cell | 5.24e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 9.69e-35 | 9 |
gastrointestinal system epithelium | 9.69e-35 | 9 |
intestinal epithelium | 9.69e-35 | 9 |
simple columnar epithelium | 1.59e-28 | 11 |
intestinal mucosa | 3.24e-24 | 13 |
wall of intestine | 3.24e-24 | 13 |
gastrointestinal system mucosa | 3.24e-24 | 13 |
mucosa | 4.73e-21 | 15 |
bile duct | 3.62e-14 | 1 |
hepatic sinusoid | 3.62e-14 | 1 |
parenchyma | 3.62e-14 | 1 |
abdomen blood vessel | 3.62e-14 | 1 |
sinusoid | 3.62e-14 | 1 |
digestive system duct | 3.62e-14 | 1 |
abdominal segment blood vessel | 3.62e-14 | 1 |
trunk blood vessel | 3.62e-14 | 1 |
liver parenchyma | 3.62e-14 | 1 |
liver lobule | 3.62e-14 | 1 |
biliary system | 3.62e-14 | 1 |
biliary tree | 3.62e-14 | 1 |
biliary bud | 3.62e-14 | 1 |
hepatic duct | 3.62e-14 | 1 |
organ component layer | 2.61e-13 | 24 |
intestine | 2.23e-10 | 31 |
gut epithelium | 2.06e-08 | 55 |
unilaminar epithelium | 5.00e-07 | 66 |
gastrointestinal system | 6.30e-07 | 47 |