FFCP PHASE1:Mm9::chr16:7217808..7217817,+: Difference between revisions
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|id=chr16:7217808..7217817,+
|short_description=p@chr16:7217808..7217817,+
|description=CAGE_peak_at_chr16:7217808..7217817,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=223 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:7217808..7217817,+ | |||
|description=CAGE_peak_at_chr16:7217808..7217817,+ | |||
|id=chr16:7217808..7217817,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!8.05e-20!10;UBERON:0000411!8.05e-20!10;UBERON:0001950!8.05e-20!10;UBERON:0002619!3.31e-16!17;UBERON:0000956!2.85e-15!21;UBERON:0001869!2.85e-15!21;UBERON:0000203!2.85e-15!21;UBERON:0002020!2.06e-13!34;UBERON:0000955!1.63e-12!50;UBERON:0006238!1.63e-12!50;UBERON:0002791!2.61e-12!29;UBERON:0003528!2.61e-12!29;UBERON:0001893!2.61e-12!29;UBERON:0001017!1.51e-11!73;UBERON:0005743!1.51e-11!73;UBERON:0002780!1.96e-11!39;UBERON:0001890!1.96e-11!39;UBERON:0006240!1.96e-11!39;UBERON:0002616!3.45e-11!49;UBERON:0000073!4.24e-11!75;UBERON:0001016!4.24e-11!75;UBERON:0003080!4.66e-11!40;UBERON:0000033!3.20e-10!63;UBERON:0001049!4.47e-10!52;UBERON:0005068!4.47e-10!52;UBERON:0006241!4.47e-10!52;UBERON:0007135!4.47e-10!52;UBERON:0003056!1.20e-09!49;UBERON:0004121!1.22e-07!102;UBERON:0000924!1.22e-07!102;UBERON:0006601!1.22e-07!102;UBERON:0002346!2.94e-07!71;UBERON:0003075!2.94e-07!71;UBERON:0007284!2.94e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.59e-42,10;UBERON:0000411,4.59e-42,10;UBERON:0001950,4.59e-42,10;UBERON:0002619,2.62e-31,17;UBERON:0000956,3.01e-31,21;UBERON:0001869,3.01e-31,21;UBERON:0000203,3.01e-31,21;UBERON:0003528,2.82e-27,29;UBERON:0002791,2.82e-27,29;UBERON:0001893,2.82e-27,29;UBERON:0002020,3.96e-23,34;UBERON:0002780,4.86e-20,39;UBERON:0001890,4.86e-20,39;UBERON:0006240,4.86e-20,39;UBERON:0000955,8.29e-20,47;UBERON:0006238,8.29e-20,47;UBERON:0003080,1.63e-19,40;UBERON:0000073,6.00e-17,54;UBERON:0002616,7.75e-17,46;UBERON:0003056,9.63e-16,49;UBERON:0001049,8.96e-15,52;UBERON:0005068,8.96e-15,52;UBERON:0006241,8.96e-15,52;UBERON:0007135,8.96e-15,52;UBERON:0001017,1.30e-14,73;UBERON:0001016,3.42e-14,75;UBERON:0002346,8.45e-12,64;UBERON:0003075,8.45e-12,64;UBERON:0007284,8.45e-12,64;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0010371,3.33e-10,73;UBERON:0010314,7.52e-08,92 | |||
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|short_description=p@chr16:7217808..7217817,+ | |||
}} | }} |
Latest revision as of 01:20, 4 August 2015
Short description: | p@chr16:7217808..7217817, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:7217808..7217817, + |
Coexpression cluster: | MCL_coexpression_mm9:223 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.59e-42 | 10 |
visual cortex | 4.59e-42 | 10 |
neocortex | 4.59e-42 | 10 |
regional part of cerebral cortex | 2.62e-31 | 17 |
cerebral cortex | 3.01e-31 | 21 |
cerebral hemisphere | 3.01e-31 | 21 |
pallium | 3.01e-31 | 21 |
brain grey matter | 2.82e-27 | 29 |
regional part of telencephalon | 2.82e-27 | 29 |
telencephalon | 2.82e-27 | 29 |
gray matter | 3.96e-23 | 34 |
regional part of forebrain | 4.86e-20 | 39 |
forebrain | 4.86e-20 | 39 |
future forebrain | 4.86e-20 | 39 |
brain | 8.29e-20 | 47 |
future brain | 8.29e-20 | 47 |
anterior neural tube | 1.63e-19 | 40 |
regional part of nervous system | 6.00e-17 | 54 |
regional part of brain | 7.75e-17 | 46 |
pre-chordal neural plate | 9.63e-16 | 49 |
neural tube | 8.96e-15 | 52 |
neural rod | 8.96e-15 | 52 |
future spinal cord | 8.96e-15 | 52 |
neural keel | 8.96e-15 | 52 |
central nervous system | 1.30e-14 | 73 |
nervous system | 3.42e-14 | 75 |
neurectoderm | 8.45e-12 | 64 |
neural plate | 8.45e-12 | 64 |
presumptive neural plate | 8.45e-12 | 64 |
ectoderm-derived structure | 5.96e-11 | 95 |
ectoderm | 5.96e-11 | 95 |
presumptive ectoderm | 5.96e-11 | 95 |
ecto-epithelium | 3.33e-10 | 73 |
structure with developmental contribution from neural crest | 7.52e-08 | 92 |